RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 PLEKHF1Q96S99 279 aa9.58□□□□□ -0.88
SCAPER-205ENST00000562948 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
SCAPER-205ENST00000562948 KRT28Q7Z3Y7 464 aa9.58□□□□□ -0.88
SCAPER-205ENST00000562948 ABTB2Q8N961 1025 aa9.58□□□□□ -0.88
SCAPER-205ENST00000562948 PAK3O75914 559 aaPredicted RBP9.57□□□□□ -0.88
SCAPER-205ENST00000562948 FAM208AQ9UK61 1670 aaKnown RBP9.57□□□□□ -0.88
SCAPER-205ENST00000562948 AATKQ6ZMQ8 1374 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 PHLPP1O60346 1717 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 ATF3P18847 181 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 USP19O94966 1318 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 IL13P35225 146 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
SCAPER-205ENST00000562948 INSRP06213 1382 aa9.56□□□□□ -0.88
SCAPER-205ENST00000562948 AHDC1Q5TGY3 1603 aaPredicted RBP9.56□□□□□ -0.88
SCAPER-205ENST00000562948 PHACTR3Q96KR7 559 aa9.56□□□□□ -0.88
SCAPER-205ENST00000562948 CDK12Q9NYV4 1490 aaPredicted RBP9.56□□□□□ -0.88
SCAPER-205ENST00000562948 CAMTA1Q9Y6Y1 1673 aa9.56□□□□□ -0.88
SCAPER-205ENST00000562948 NLRP6P59044 892 aa9.56□□□□□ -0.88
SCAPER-205ENST00000562948 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
SCAPER-205ENST00000562948 PSME1Q06323 249 aa9.55□□□□□ -0.88
SCAPER-205ENST00000562948 COL22A1Q8NFW1 1626 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-205ENST00000562948 SHANK3Q9BYB0 1731 aa9.55□□□□□ -0.88
SCAPER-205ENST00000562948 PPM1GO15355 546 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-205ENST00000562948 TNS3Q68CZ2 1445 aa9.55□□□□□ -0.88
SCAPER-205ENST00000562948 EIF4A2Q14240 407 aaKnown RBP9.54□□□□□ -0.88
SCAPER-205ENST00000562948 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
SCAPER-205ENST00000562948 ZNF521Q96K83 1311 aa9.54□□□□□ -0.88
SCAPER-205ENST00000562948 TTC21AQ8NDW8 1320 aa9.54□□□□□ -0.88
SCAPER-205ENST00000562948 GCP02774 474 aa9.54□□□□□ -0.88
SCAPER-205ENST00000562948 COG3Q96JB2 828 aa9.53□□□□□ -0.88
SCAPER-205ENST00000562948 HOXC9P31274 260 aa9.52□□□□□ -0.88
SCAPER-205ENST00000562948 HMOX1P09601 288 aa9.52□□□□□ -0.89
SCAPER-205ENST00000562948 HNRNPUQ00839 825 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCAPER-205ENST00000562948 IRX6P78412 446 aaPredicted RBP9.52□□□□□ -0.89
SCAPER-205ENST00000562948 ARHGEF25Q86VW2 580 aa9.52□□□□□ -0.89
SCAPER-205ENST00000562948 LRRC59Q96AG4 307 aaKnown RBP9.52□□□□□ -0.89
SCAPER-205ENST00000562948 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
SCAPER-205ENST00000562948 SBNO1A3KN83 1393 aa9.51□□□□□ -0.89
SCAPER-205ENST00000562948 USHBP1Q8N6Y0 703 aa9.51□□□□□ -0.89
SCAPER-205ENST00000562948 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
SCAPER-205ENST00000562948 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
SCAPER-205ENST00000562948 CHRNA2Q15822 529 aa9.51□□□□□ -0.89
SCAPER-205ENST00000562948 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
SCAPER-205ENST00000562948 KIAA0232Q92628 1395 aa9.51□□□□□ -0.89
SCAPER-205ENST00000562948 PLCH1Q4KWH8 1693 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 AEBP2Q6ZN18 517 aaPredicted RBP9.5□□□□□ -0.89
SCAPER-205ENST00000562948 PHF23Q9BUL5 403 aaPredicted RBP9.5□□□□□ -0.89
SCAPER-205ENST00000562948 LRP6O75581 1613 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 NRAPQ86VF7 1730 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 APAF1O14727 1248 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 EYA1Q99502 592 aa9.5□□□□□ -0.89
SCAPER-205ENST00000562948 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
SCAPER-205ENST00000562948 NPHP3Q7Z494 1330 aa9.49□□□□□ -0.89
SCAPER-205ENST00000562948 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
SCAPER-205ENST00000562948 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
SCAPER-205ENST00000562948 FAM83GA6ND36 823 aa9.49□□□□□ -0.89
SCAPER-205ENST00000562948 KDRP35968 1356 aa9.48□□□□□ -0.89
SCAPER-205ENST00000562948 GLIPR1L2Q4G1C9 344 aa9.47□□□□□ -0.89
SCAPER-205ENST00000562948 FLT4P35916 1363 aa9.47□□□□□ -0.89
SCAPER-205ENST00000562948 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
SCAPER-205ENST00000562948 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
SCAPER-205ENST00000562948 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
SCAPER-205ENST00000562948 ZBED9Q6R2W3 1325 aa9.47□□□□□ -0.89
SCAPER-205ENST00000562948 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
SCAPER-205ENST00000562948 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
SCAPER-205ENST00000562948 IGSF1Q8N6C5 1336 aa9.46□□□□□ -0.89
SCAPER-205ENST00000562948 SIPA1L3O60292 1781 aaPredicted RBP9.46□□□□□ -0.89
SCAPER-205ENST00000562948 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.89
SCAPER-205ENST00000562948 MEGF6O75095 1541 aa9.46□□□□□ -0.9
SCAPER-205ENST00000562948 WNK3Q9BYP7 1800 aa9.46□□□□□ -0.9
SCAPER-205ENST00000562948 COL5A2P05997 1499 aaPredicted RBP9.46□□□□□ -0.9
SCAPER-205ENST00000562948 DIAPH1O60610 1272 aaKnown RBP9.46□□□□□ -0.9
SCAPER-205ENST00000562948 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.9
SCAPER-205ENST00000562948 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCAPER-205ENST00000562948 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
SCAPER-205ENST00000562948 LRRC37A3O60309 1634 aa9.46□□□□□ -0.9
SCAPER-205ENST00000562948 ERBB3P21860 1342 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
SCAPER-205ENST00000562948 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 IP6K1Q92551 441 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 TOGARAM1Q9Y4F4 1720 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 CPDO75976 1380 aa9.45□□□□□ -0.9
SCAPER-205ENST00000562948 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
SCAPER-205ENST00000562948 ADAMTS7Q9UKP4 1686 aa9.44□□□□□ -0.9
SCAPER-205ENST00000562948 PKD1L3Q7Z443 1732 aa9.44□□□□□ -0.9
SCAPER-205ENST00000562948 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
SCAPER-205ENST00000562948 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
SCAPER-205ENST00000562948 TRMT2AQ8IZ69 625 aaKnown RBP9.44□□□□□ -0.9
SCAPER-205ENST00000562948 HSPA1LP34931 641 aa9.43□□□□□ -0.9
SCAPER-205ENST00000562948 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
SCAPER-205ENST00000562948 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
SCAPER-205ENST00000562948 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
SCAPER-205ENST00000562948 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
SCAPER-205ENST00000562948 GLI3P10071 1580 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms