RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 BAG6P46379 1132 aa22.26■■□□□ 1.15
SF3B3-203ENST00000562874 NME9Q86XW9 330 aa22.25■■□□□ 1.15
SF3B3-203ENST00000562874 SLC12A5Q9H2X9 1139 aa22.25■■□□□ 1.15
SF3B3-203ENST00000562874 EDC4Q6P2E9 1401 aaKnown RBP22.24■■□□□ 1.15
SF3B3-203ENST00000562874 ST20-MTHFSA0A0A6YYL1 179 aa22.24■■□□□ 1.15
SF3B3-203ENST00000562874 AXIN2Q9Y2T1 843 aa22.24■■□□□ 1.15
SF3B3-203ENST00000562874 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
SF3B3-203ENST00000562874 TESK2Q96S53 571 aa22.23■■□□□ 1.15
SF3B3-203ENST00000562874 LRP5O75197 1615 aa22.23■■□□□ 1.15
SF3B3-203ENST00000562874 FAM208AQ9UK61 1670 aaKnown RBP22.23■■□□□ 1.15
SF3B3-203ENST00000562874 USP47Q96K76 1375 aa22.23■■□□□ 1.15
SF3B3-203ENST00000562874 DISP2A7MBM2 1401 aa22.23■■□□□ 1.15
SF3B3-203ENST00000562874 TRIM37O94972 964 aa22.22■■□□□ 1.15
SF3B3-203ENST00000562874 TOM1L2Q6ZVM7 507 aa22.22■■□□□ 1.15
SF3B3-203ENST00000562874 ARHGEF25Q86VW2 580 aa22.22■■□□□ 1.15
SF3B3-203ENST00000562874 KCNH5Q8NCM2 988 aa22.22■■□□□ 1.15
SF3B3-203ENST00000562874 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
SF3B3-203ENST00000562874 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
SF3B3-203ENST00000562874 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
SF3B3-203ENST00000562874 HDGFL2Q7Z4V5 671 aaPredicted RBP22.21■■□□□ 1.15
SF3B3-203ENST00000562874 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
SF3B3-203ENST00000562874 USP31Q70CQ4 1352 aa22.21■■□□□ 1.15
SF3B3-203ENST00000562874 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
SF3B3-203ENST00000562874 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
SF3B3-203ENST00000562874 THRAP3Q9Y2W1 955 aaKnown RBP22.2■■□□□ 1.14
SF3B3-203ENST00000562874 FAM196AQ6ZSG2 479 aa22.19■■□□□ 1.14
SF3B3-203ENST00000562874 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
SF3B3-203ENST00000562874 KAT6BQ8WYB5 2073 aa22.19■■□□□ 1.14
SF3B3-203ENST00000562874 PSDA5PKW4 1024 aaPredicted RBP22.18■■□□□ 1.14
SF3B3-203ENST00000562874 OVOS2A0A0G2JMS6 1433 aa22.17■■□□□ 1.14
SF3B3-203ENST00000562874 CSB-PGBD3P0DP91 1061 aa22.17■■□□□ 1.14
SF3B3-203ENST00000562874 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
SF3B3-203ENST00000562874 TERF2IPQ9NYB0 399 aa22.16■■□□□ 1.14
SF3B3-203ENST00000562874 NINLQ9Y2I6 1382 aa22.15■■□□□ 1.14
SF3B3-203ENST00000562874 NHSQ6T4R5 1651 aa22.13■■□□□ 1.13
SF3B3-203ENST00000562874 SHANK3Q9BYB0 1731 aa22.12■■□□□ 1.13
SF3B3-203ENST00000562874 APBA3O96018 575 aa22.12■■□□□ 1.13
SF3B3-203ENST00000562874 DDB1Q16531 1140 aa22.12■■□□□ 1.13
SF3B3-203ENST00000562874 PUS7Q96PZ0 661 aaKnown RBP22.12■■□□□ 1.13
SF3B3-203ENST00000562874 TNS2Q63HR2 1409 aa22.11■■□□□ 1.13
SF3B3-203ENST00000562874 ANKRD36BQ8N2N9 1353 aa22.11■■□□□ 1.13
SF3B3-203ENST00000562874 BTAF1O14981 1849 aa22.1■■□□□ 1.13
SF3B3-203ENST00000562874 ERBB3P21860 1342 aa22.09■■□□□ 1.13
SF3B3-203ENST00000562874 SRCAPQ6ZRS2 3230 aa22.09■■□□□ 1.13
SF3B3-203ENST00000562874 CAMKK2Q96RR4 588 aa22.09■■□□□ 1.13
SF3B3-203ENST00000562874 CARD10Q9BWT7 1032 aa22.09■■□□□ 1.13
SF3B3-203ENST00000562874 CCDC7Q96M83 1385 aa22.09■■□□□ 1.13
SF3B3-203ENST00000562874 TMF1P82094 1093 aa22.08■■□□□ 1.13
SF3B3-203ENST00000562874 DOT1LQ8TEK3 1739 aa22.07■■□□□ 1.12
SF3B3-203ENST00000562874 ANKRD26Q9UPS8 1709 aa22.07■■□□□ 1.12
SF3B3-203ENST00000562874 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
SF3B3-203ENST00000562874 PARD3Q8TEW0 1356 aa22.06■■□□□ 1.12
SF3B3-203ENST00000562874 MARCH10Q8NA82 808 aaPredicted RBP22.05■■□□□ 1.12
SF3B3-203ENST00000562874 MAP2P11137 1827 aaKnown RBP22.05■■□□□ 1.12
SF3B3-203ENST00000562874 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
SF3B3-203ENST00000562874 PTF1AQ7RTS3 328 aa22.04■■□□□ 1.12
SF3B3-203ENST00000562874 ANKRD24Q8TF21 1146 aa22.04■■□□□ 1.12
SF3B3-203ENST00000562874 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
SF3B3-203ENST00000562874 FBLN1P23142 703 aa22.03■■□□□ 1.12
SF3B3-203ENST00000562874 COG3Q96JB2 828 aa22.03■■□□□ 1.12
SF3B3-203ENST00000562874 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
SF3B3-203ENST00000562874 CASZ1Q86V15 1759 aa22.02■■□□□ 1.11
SF3B3-203ENST00000562874 SLC24A1O60721 1099 aa22.01■■□□□ 1.11
SF3B3-203ENST00000562874 LTV1Q96GA3 475 aaPredicted RBP22.01■■□□□ 1.11
SF3B3-203ENST00000562874 MAP3K19Q56UN5 1328 aa22.01■■□□□ 1.11
SF3B3-203ENST00000562874 GGNBP2Q9H3C7 697 aa22■■□□□ 1.11
SF3B3-203ENST00000562874 BCL9O00512 1426 aa21.98■■□□□ 1.11
SF3B3-203ENST00000562874 NSD3Q9BZ95 1437 aa21.98■■□□□ 1.11
SF3B3-203ENST00000562874 TIMELESSQ9UNS1 1208 aa21.98■■□□□ 1.11
SF3B3-203ENST00000562874 C11orf95C9JLR9 678 aaPredicted RBP21.97■■□□□ 1.11
SF3B3-203ENST00000562874 EXOC5O00471 708 aa21.97■■□□□ 1.11
SF3B3-203ENST00000562874 IP6K1Q92551 441 aa21.97■■□□□ 1.11
SF3B3-203ENST00000562874 IL2RBP14784 551 aa21.96■■□□□ 1.11
SF3B3-203ENST00000562874 HOXC9P31274 260 aa21.96■■□□□ 1.11
SF3B3-203ENST00000562874 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
SF3B3-203ENST00000562874 CCER1Q8TC90 406 aaPredicted RBP21.96■■□□□ 1.11
SF3B3-203ENST00000562874 TUBGCP6Q96RT7 1819 aa21.95■■□□□ 1.1
SF3B3-203ENST00000562874 FYB1O15117 783 aa21.95■■□□□ 1.1
SF3B3-203ENST00000562874 MEGF6O75095 1541 aa21.95■■□□□ 1.1
SF3B3-203ENST00000562874 AMPHP49418 695 aa21.94■■□□□ 1.1
SF3B3-203ENST00000562874 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
SF3B3-203ENST00000562874 BCL11BQ9C0K0 894 aaPredicted RBP21.94■■□□□ 1.1
SF3B3-203ENST00000562874 RTL1A6NKG5 1358 aa21.94■■□□□ 1.1
SF3B3-203ENST00000562874 PAPPAQ13219 1627 aa21.93■■□□□ 1.1
SF3B3-203ENST00000562874 ACSBG1Q96GR2 724 aa21.93■■□□□ 1.1
SF3B3-203ENST00000562874 POLR3GLQ9BT43 218 aa21.93■■□□□ 1.1
SF3B3-203ENST00000562874 LY75O60449 1722 aa21.92■■□□□ 1.1
SF3B3-203ENST00000562874 KCNQ2O43526 872 aa21.91■■□□□ 1.1
SF3B3-203ENST00000562874 ANO8Q9HCE9 1232 aaPredicted RBP21.91■■□□□ 1.1
SF3B3-203ENST00000562874 PKD1L3Q7Z443 1732 aa21.9■■□□□ 1.1
SF3B3-203ENST00000562874 NBPF14Q5TI25 921 aa21.9■■□□□ 1.1
SF3B3-203ENST00000562874 CARD14Q9BXL6 1004 aa21.9■■□□□ 1.1
SF3B3-203ENST00000562874 ITGB4P16144 1822 aa21.9■■□□□ 1.1
SF3B3-203ENST00000562874 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.1
SF3B3-203ENST00000562874 PLSCR1O15162 318 aa21.89■■□□□ 1.09
SF3B3-203ENST00000562874 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.09
SF3B3-203ENST00000562874 USHBP1Q8N6Y0 703 aa21.87■■□□□ 1.09
SF3B3-203ENST00000562874 QSER1Q2KHR3 1735 aa21.86■■□□□ 1.09
SF3B3-203ENST00000562874 FLT4P35916 1363 aa21.86■■□□□ 1.09
SF3B3-203ENST00000562874 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms