RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 TMEM132EQ6IEE7 984 aa10.62□□□□□ -0.71
CNEP1R1-204ENST00000562576 PTF1AQ7RTS3 328 aa10.62□□□□□ -0.71
CNEP1R1-204ENST00000562576 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-204ENST00000562576 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
CNEP1R1-204ENST00000562576 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
CNEP1R1-204ENST00000562576 ZBTB7AO95365 584 aa10.61□□□□□ -0.71
CNEP1R1-204ENST00000562576 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
CNEP1R1-204ENST00000562576 PHF8Q9UPP1 1060 aa10.61□□□□□ -0.71
CNEP1R1-204ENST00000562576 THSD7AQ9UPZ6 1657 aa10.6□□□□□ -0.71
CNEP1R1-204ENST00000562576 RGPD8O14715 1765 aaPredicted RBP10.6□□□□□ -0.71
CNEP1R1-204ENST00000562576 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
CNEP1R1-204ENST00000562576 RREB1Q92766 1687 aa10.6□□□□□ -0.71
CNEP1R1-204ENST00000562576 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 PRAG1Q86YV5 1406 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 ITGAEP38570 1179 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 PTGER2P43116 358 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 CHRNA2Q15822 529 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 FAM196AQ6ZSG2 479 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
CNEP1R1-204ENST00000562576 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.71
CNEP1R1-204ENST00000562576 NRKQ7Z2Y5 1582 aa10.58□□□□□ -0.72
CNEP1R1-204ENST00000562576 VGFO15240 615 aaPredicted RBP10.58□□□□□ -0.72
CNEP1R1-204ENST00000562576 ST18O60284 1047 aa10.58□□□□□ -0.72
CNEP1R1-204ENST00000562576 PSME1Q06323 249 aa10.58□□□□□ -0.72
CNEP1R1-204ENST00000562576 L3MBTL3Q96JM7 780 aaPredicted RBP10.58□□□□□ -0.72
CNEP1R1-204ENST00000562576 SPATA31A1Q5TZJ5 1347 aa10.58□□□□□ -0.72
CNEP1R1-204ENST00000562576 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
CNEP1R1-204ENST00000562576 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
CNEP1R1-204ENST00000562576 FHDC1Q9C0D6 1143 aaPredicted RBP10.57□□□□□ -0.72
CNEP1R1-204ENST00000562576 STRN4Q9NRL3 753 aa10.57□□□□□ -0.72
CNEP1R1-204ENST00000562576 MYOM1P52179 1685 aa10.57□□□□□ -0.72
CNEP1R1-204ENST00000562576 FMN2Q9NZ56 1722 aa10.56□□□□□ -0.72
CNEP1R1-204ENST00000562576 SBNO1A3KN83 1393 aa10.56□□□□□ -0.72
CNEP1R1-204ENST00000562576 SYT17Q9BSW7 474 aa10.56□□□□□ -0.72
CNEP1R1-204ENST00000562576 SAFB2Q14151 953 aaKnown RBP eCLIP10.55□□□□□ -0.72
CNEP1R1-204ENST00000562576 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
CNEP1R1-204ENST00000562576 TECPR2O15040 1411 aa10.55□□□□□ -0.72
CNEP1R1-204ENST00000562576 PARD3Q8TEW0 1356 aa10.54□□□□□ -0.72
CNEP1R1-204ENST00000562576 PSEN1P49768 467 aa10.54□□□□□ -0.72
CNEP1R1-204ENST00000562576 ADGRB2O60241 1585 aa10.53□□□□□ -0.72
CNEP1R1-204ENST00000562576 COL14A1Q05707 1796 aaKnown RBP10.53□□□□□ -0.72
CNEP1R1-204ENST00000562576 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
CNEP1R1-204ENST00000562576 NRXN1Q9ULB1 1477 aa10.53□□□□□ -0.72
CNEP1R1-204ENST00000562576 KIF1AQ12756 1690 aa10.53□□□□□ -0.72
CNEP1R1-204ENST00000562576 ARHGEF10O15013 1369 aa10.52□□□□□ -0.72
CNEP1R1-204ENST00000562576 GIGYF1O75420 1035 aaPredicted RBP10.52□□□□□ -0.73
CNEP1R1-204ENST00000562576 PDE3BQ13370 1112 aa10.52□□□□□ -0.73
CNEP1R1-204ENST00000562576 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
CNEP1R1-204ENST00000562576 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
CNEP1R1-204ENST00000562576 ZC3H6P61129 1189 aaKnown RBP10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 NUTM2GQ5VZR2 741 aa10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 PRDM11Q9NQV5 511 aa10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 KIF1BO60333 1816 aa10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 ROCK1Q13464 1354 aa10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 KIAA0232Q92628 1395 aa10.51□□□□□ -0.73
CNEP1R1-204ENST00000562576 RGL3Q3MIN7 710 aa10.5□□□□□ -0.73
CNEP1R1-204ENST00000562576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.737e-6■■□□□ 12.8
CNEP1R1-204ENST00000562576 ABCC11Q96J66 1382 aa10.5□□□□□ -0.73
CNEP1R1-204ENST00000562576 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
CNEP1R1-204ENST00000562576 PPLO60437 1756 aa10.49□□□□□ -0.73
CNEP1R1-204ENST00000562576 PRR36Q9H6K5 1346 aa10.49□□□□□ -0.73
CNEP1R1-204ENST00000562576 HIRIP3Q9BW71 556 aaPredicted RBP10.48□□□□□ -0.73
CNEP1R1-204ENST00000562576 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
CNEP1R1-204ENST00000562576 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
CNEP1R1-204ENST00000562576 RPGRIP1LQ68CZ1 1315 aa10.48□□□□□ -0.73
CNEP1R1-204ENST00000562576 RRBP1Q9P2E9 1410 aaKnown RBP10.48□□□□□ -0.73
CNEP1R1-204ENST00000562576 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 IFT172Q9UG01 1749 aa10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 CHD4Q14839 1912 aa10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 YTHDC2Q9H6S0 1430 aaKnown RBP10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 CRYBG1Q9Y4K1 1723 aa10.47□□□□□ -0.73
CNEP1R1-204ENST00000562576 GOLGB1Q14789 3259 aaKnown RBP10.46□□□□□ -0.73
CNEP1R1-204ENST00000562576 EVA1CP58658 441 aa10.46□□□□□ -0.73
CNEP1R1-204ENST00000562576 GPR162Q16538 588 aa10.46□□□□□ -0.73
CNEP1R1-204ENST00000562576 PPARGC1BQ86YN6 1023 aaKnown RBP10.46□□□□□ -0.73
CNEP1R1-204ENST00000562576 PRAM1Q96QH2 718 aa10.46□□□□□ -0.73
CNEP1R1-204ENST00000562576 ACIN1Q9UKV3 1341 aaKnown RBP10.46□□□□□ -0.73
CNEP1R1-204ENST00000562576 SHANK3Q9BYB0 1731 aa10.45□□□□□ -0.74
CNEP1R1-204ENST00000562576 SSH2Q76I76 1423 aa10.44□□□□□ -0.74
CNEP1R1-204ENST00000562576 PLSCR1O15162 318 aa10.44□□□□□ -0.74
CNEP1R1-204ENST00000562576 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
CNEP1R1-204ENST00000562576 TCP11L2Q8N4U5 519 aa10.44□□□□□ -0.74
CNEP1R1-204ENST00000562576 ARXQ96QS3 562 aa10.44□□□□□ -0.74
CNEP1R1-204ENST00000562576 SLC15A2Q16348 729 aa10.43□□□□□ -0.74
CNEP1R1-204ENST00000562576 KNDC1Q76NI1 1749 aa10.42□□□□□ -0.74
CNEP1R1-204ENST00000562576 PEAK1Q9H792 1746 aa10.42□□□□□ -0.74
CNEP1R1-204ENST00000562576 G3V3G9 751 aa10.42□□□□□ -0.74
CNEP1R1-204ENST00000562576 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
CNEP1R1-204ENST00000562576 NLGN2Q8NFZ4 835 aa10.42□□□□□ -0.74
CNEP1R1-204ENST00000562576 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
CNEP1R1-204ENST00000562576 MINK1Q8N4C8 1332 aaPredicted RBP10.41□□□□□ -0.74
CNEP1R1-204ENST00000562576 TXNRD1Q16881 649 aa10.41□□□□□ -0.74
CNEP1R1-204ENST00000562576 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms