RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SERPINC1P01008 464 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
RPAP1-204ENST00000562303 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
RPAP1-204ENST00000562303 CAVIN1Q6NZI2 390 aaKnown RBP13.34□□□□□ -0.27
RPAP1-204ENST00000562303 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.27
RPAP1-204ENST00000562303 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.27
RPAP1-204ENST00000562303 TSPY26PQ9H489 355 aa13.33□□□□□ -0.27
RPAP1-204ENST00000562303 SEPT7Q16181 437 aaKnown RBP13.33□□□□□ -0.28
RPAP1-204ENST00000562303 CDK19Q9BWU1 502 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
RPAP1-204ENST00000562303 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 NEBLO76041 1014 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 MBD3O95983 291 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 TDO2P48775 406 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 LRRCC1Q9C099 1032 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
RPAP1-204ENST00000562303 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 GCC1Q96CN9 775 aa13.33□□□□□ -0.28
RPAP1-204ENST00000562303 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
RPAP1-204ENST00000562303 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
RPAP1-204ENST00000562303 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
RPAP1-204ENST00000562303 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
RPAP1-204ENST00000562303 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
RPAP1-204ENST00000562303 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
RPAP1-204ENST00000562303 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-204ENST00000562303 RABEP1Q15276 862 aa13.32□□□□□ -0.28
RPAP1-204ENST00000562303 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
RPAP1-204ENST00000562303 ME1P48163 572 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 AXDND1Q5T1B0 1012 aaPredicted RBP13.31□□□□□ -0.28
RPAP1-204ENST00000562303 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 PDZRN3Q9UPQ7 1066 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 DESP17661 470 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
RPAP1-204ENST00000562303 AACSQ86V21 672 aa13.31□□□□□ -0.28
RPAP1-204ENST00000562303 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
RPAP1-204ENST00000562303 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
RPAP1-204ENST00000562303 LRP2BPQ9P2M1 347 aa13.3□□□□□ -0.28
RPAP1-204ENST00000562303 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
RPAP1-204ENST00000562303 USP5P45974 858 aa13.3□□□□□ -0.28
RPAP1-204ENST00000562303 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
RPAP1-204ENST00000562303 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 MRE11P49959 708 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 TXLNBQ8N3L3 684 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 PIBF1Q8WXW3 757 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 TSPYL1Q9H0U9 437 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 CDKL5O76039 1030 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 GOLGA6L10A6NI86 522 aa13.29□□□□□ -0.28
RPAP1-204ENST00000562303 XPCQ01831 940 aaPredicted RBP13.29□□□□□ -0.28
RPAP1-204ENST00000562303 SPC24Q8NBT2 197 aa13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CCDC97Q96F63 343 aaPredicted RBP13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CCDC85AQ96PX6 553 aaPredicted RBP13.28□□□□□ -0.28
RPAP1-204ENST00000562303 BRD4O60885 1362 aaPredicted RBP13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CT47B1P0C2W7 299 aaPredicted RBP13.28□□□□□ -0.28
RPAP1-204ENST00000562303 ENOX2Q16206 610 aaKnown RBP13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CWC15Q9P013 229 aaKnown RBP13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CUX1P39880 1505 aa13.28□□□□□ -0.28
RPAP1-204ENST00000562303 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
RPAP1-204ENST00000562303 TRAK2O60296 914 aa13.28□□□□□ -0.28
RPAP1-204ENST00000562303 CHMP4BP1P59074 171 aa13.28□□□□□ -0.28
RPAP1-204ENST00000562303 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.28
RPAP1-204ENST00000562303 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.28
RPAP1-204ENST00000562303 TNMDQ9H2S6 317 aa13.27□□□□□ -0.28
RPAP1-204ENST00000562303 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.28
RPAP1-204ENST00000562303 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.28
RPAP1-204ENST00000562303 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
RPAP1-204ENST00000562303 NFKBIBQ15653 356 aa13.27□□□□□ -0.29
RPAP1-204ENST00000562303 CDCA7LQ96GN5 454 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 SRGAP3O43295 1099 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 STARD3NLO95772 234 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 LARP1BQ659C4 914 aaKnown RBP13.26□□□□□ -0.29
RPAP1-204ENST00000562303 ABCF2Q9UG63 623 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 ZC3H6P61129 1189 aaKnown RBP13.26□□□□□ -0.29
RPAP1-204ENST00000562303 BLOC1S2Q6QNY1 142 aa13.26□□□□□ -0.29
RPAP1-204ENST00000562303 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
RPAP1-204ENST00000562303 SSR1P43307 286 aaKnown RBP13.25□□□□□ -0.29
RPAP1-204ENST00000562303 AIDAQ96BJ3 306 aa13.25□□□□□ -0.29
RPAP1-204ENST00000562303 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
RPAP1-204ENST00000562303 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
RPAP1-204ENST00000562303 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
RPAP1-204ENST00000562303 SCAPERQ9BY12 1400 aa13.25□□□□□ -0.29
RPAP1-204ENST00000562303 KRT85P78386 507 aa13.25□□□□□ -0.29
RPAP1-204ENST00000562303 TNIP1Q15025 636 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 TAX1BP1Q86VP1 789 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 ZPR1O75312 459 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 EZRP15311 586 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms