RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 POLR3GLQ9BT43 218 aa9.85□□□□□ -0.83
TUBGCP4-203ENST00000562053 TRPC5Q9UL62 973 aaPredicted RBP9.85□□□□□ -0.83
TUBGCP4-203ENST00000562053 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
TUBGCP4-203ENST00000562053 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 BLMP54132 1417 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 FYB1O15117 783 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 NPM3O75607 178 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 ZEB1P37275 1124 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 CHRNA2Q15822 529 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 VPS72Q15906 364 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 ARHGEF25Q86VW2 580 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 COG3Q96JB2 828 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 BTG4Q9NY30 223 aa9.84□□□□□ -0.83
TUBGCP4-203ENST00000562053 CRB1P82279 1406 aa9.83□□□□□ -0.84
TUBGCP4-203ENST00000562053 SMG6Q86US8 1419 aaKnown RBP9.83□□□□□ -0.84
TUBGCP4-203ENST00000562053 RBM6P78332 1123 aaKnown RBP9.83□□□□□ -0.84
TUBGCP4-203ENST00000562053 MAP2P11137 1827 aaKnown RBP9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 SOX12O15370 315 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 RXRBP28702 533 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 GGNBP2Q9H3C7 697 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 PANK3Q9H999 370 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 KIF24Q5T7B8 1368 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 SPATA31A5Q5VU36 1347 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 SPATA31A7Q8IWB4 1347 aa9.82□□□□□ -0.84
TUBGCP4-203ENST00000562053 RGPD2P0DJD1 1756 aa9.81□□□□□ -0.84
TUBGCP4-203ENST00000562053 EP400Q96L91 3159 aa9.81□□□□□ -0.84
TUBGCP4-203ENST00000562053 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
TUBGCP4-203ENST00000562053 ERBB3P21860 1342 aa9.81□□□□□ -0.84
TUBGCP4-203ENST00000562053 MAP3K19Q56UN5 1328 aa9.81□□□□□ -0.84
TUBGCP4-203ENST00000562053 WDR17Q8IZU2 1322 aa9.81□□□□□ -0.84
TUBGCP4-203ENST00000562053 FLT4P35916 1363 aa9.8□□□□□ -0.84
TUBGCP4-203ENST00000562053 NPC1L1Q9UHC9 1359 aa9.8□□□□□ -0.84
TUBGCP4-203ENST00000562053 DISP2A7MBM2 1401 aa9.8□□□□□ -0.84
TUBGCP4-203ENST00000562053 SPATA31A1Q5TZJ5 1347 aa9.8□□□□□ -0.84
TUBGCP4-203ENST00000562053 ZBTB7CA1YPR0 619 aa9.79□□□□□ -0.84
TUBGCP4-203ENST00000562053 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
TUBGCP4-203ENST00000562053 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
TUBGCP4-203ENST00000562053 SHANK3Q9BYB0 1731 aa9.79□□□□□ -0.84
TUBGCP4-203ENST00000562053 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
TUBGCP4-203ENST00000562053 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
TUBGCP4-203ENST00000562053 RGPD1P0DJD0 1748 aa9.78□□□□□ -0.84
TUBGCP4-203ENST00000562053 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 NCAPD2Q15021 1401 aa9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 TNS2Q63HR2 1409 aa9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 HOXC9P31274 260 aa9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 CCDC9Q9Y3X0 531 aaKnown RBP9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
TUBGCP4-203ENST00000562053 INSRP06213 1382 aa9.76□□□□□ -0.85
TUBGCP4-203ENST00000562053 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
TUBGCP4-203ENST00000562053 ONECUT3O60422 494 aaPredicted RBP9.76□□□□□ -0.85
TUBGCP4-203ENST00000562053 IP6K1Q92551 441 aa9.76□□□□□ -0.85
TUBGCP4-203ENST00000562053 FBLN1P23142 703 aa9.75□□□□□ -0.85
TUBGCP4-203ENST00000562053 FAM98CQ17RN3 349 aaKnown RBP9.75□□□□□ -0.85
TUBGCP4-203ENST00000562053 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
TUBGCP4-203ENST00000562053 TCP11L2Q8N4U5 519 aa9.75□□□□□ -0.85
TUBGCP4-203ENST00000562053 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
TUBGCP4-203ENST00000562053 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
TUBGCP4-203ENST00000562053 COL3A1P02461 1466 aaPredicted RBP9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 MEGF6O75095 1541 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 SOCS7O14512 581 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 AMPHP49418 695 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 EVA1CP58658 441 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 TOM1L2Q6ZVM7 507 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 SEPT12Q8IYM1 358 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 ANKRD24Q8TF21 1146 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
TUBGCP4-203ENST00000562053 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
TUBGCP4-203ENST00000562053 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
TUBGCP4-203ENST00000562053 USP35Q9P2H5 1018 aa9.73□□□□□ -0.85
TUBGCP4-203ENST00000562053 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
TUBGCP4-203ENST00000562053 NHSQ6T4R5 1651 aa9.72□□□□□ -0.85
TUBGCP4-203ENST00000562053 MORC1Q86VD1 984 aa9.72□□□□□ -0.85
TUBGCP4-203ENST00000562053 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
TUBGCP4-203ENST00000562053 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
TUBGCP4-203ENST00000562053 RGPD3A6NKT7 1758 aaPredicted RBP9.72□□□□□ -0.85
TUBGCP4-203ENST00000562053 RGPD4Q7Z3J3 1758 aa9.72□□□□□ -0.85
TUBGCP4-203ENST00000562053 DOT1LQ8TEK3 1739 aa9.71□□□□□ -0.85
TUBGCP4-203ENST00000562053 A0A0G2JS52 829 aa9.71□□□□□ -0.86
TUBGCP4-203ENST00000562053 TNNT2P45379 298 aaPredicted RBP9.71□□□□□ -0.86
TUBGCP4-203ENST00000562053 MYT1Q01538 1121 aa9.71□□□□□ -0.86
TUBGCP4-203ENST00000562053 HSP90AB2PQ58FF8 381 aa9.71□□□□□ -0.86
TUBGCP4-203ENST00000562053 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
TUBGCP4-203ENST00000562053 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.86
TUBGCP4-203ENST00000562053 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
TUBGCP4-203ENST00000562053 KRT27Q7Z3Y8 459 aa9.7□□□□□ -0.86
TUBGCP4-203ENST00000562053 CDCA7Q9BWT1 371 aaPredicted RBP9.7□□□□□ -0.86
TUBGCP4-203ENST00000562053 PLEKHG2Q9H7P9 1386 aa9.7□□□□□ -0.86
TUBGCP4-203ENST00000562053 BCL9O00512 1426 aa9.7□□□□□ -0.86
TUBGCP4-203ENST00000562053 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
TUBGCP4-203ENST00000562053 TOGARAM1Q9Y4F4 1720 aa9.69□□□□□ -0.86
TUBGCP4-203ENST00000562053 RREB1Q92766 1687 aa9.68□□□□□ -0.86
TUBGCP4-203ENST00000562053 IGSF1Q8N6C5 1336 aa9.68□□□□□ -0.86
TUBGCP4-203ENST00000562053 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
TUBGCP4-203ENST00000562053 IL2RBP14784 551 aa9.68□□□□□ -0.86
TUBGCP4-203ENST00000562053 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
TUBGCP4-203ENST00000562053 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
TUBGCP4-203ENST00000562053 KDRP35968 1356 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms