RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 NCBP3Q53F19 620 aaKnown RBP35.25■■■■□ 3.23
AP4E1-207ENST00000561441 RRP7AQ9Y3A4 280 aaKnown RBP35.24■■■■□ 3.23
AP4E1-207ENST00000561441 MAPK8IP3Q9UPT6 1336 aa35.24■■■■□ 3.23
AP4E1-207ENST00000561441 PRKAR2BP31323 418 aa35.24■■■■□ 3.23
AP4E1-207ENST00000561441 SOS2Q07890 1332 aaPredicted RBP35.24■■■■□ 3.23
AP4E1-207ENST00000561441 NEUROD2Q15784 382 aa35.21■■■■□ 3.23
AP4E1-207ENST00000561441 PHF23Q9BUL5 403 aaPredicted RBP35.21■■■■□ 3.23
AP4E1-207ENST00000561441 MED1Q15648 1581 aaPredicted RBP35.21■■■■□ 3.23
AP4E1-207ENST00000561441 PLEKHG5O94827 1062 aa35.21■■■■□ 3.23
AP4E1-207ENST00000561441 GOLGA2Q08379 1002 aa35.21■■■■□ 3.23
AP4E1-207ENST00000561441 WWC1Q8IX03 1113 aa35.21■■■■□ 3.23
AP4E1-207ENST00000561441 IP6K1Q92551 441 aa35.21■■■■□ 3.23
AP4E1-207ENST00000561441 ARHGEF10O15013 1369 aa35.2■■■■□ 3.23
AP4E1-207ENST00000561441 CCDC27Q2M243 656 aa35.2■■■■□ 3.23
AP4E1-207ENST00000561441 ARHGEF25Q86VW2 580 aa35.2■■■■□ 3.23
AP4E1-207ENST00000561441 AEBP2Q6ZN18 517 aaPredicted RBP35.19■■■■□ 3.22
AP4E1-207ENST00000561441 TMPOP42166 694 aaKnown RBP35.18■■■■□ 3.22
AP4E1-207ENST00000561441 LTN1O94822 1766 aa35.18■■■■□ 3.22
AP4E1-207ENST00000561441 RGPD1P0DJD0 1748 aa35.18■■■■□ 3.22
AP4E1-207ENST00000561441 PHRF1Q9P1Y6 1649 aaKnown RBP35.16■■■■□ 3.22
AP4E1-207ENST00000561441 NEFMP07197 916 aa35.16■■■■□ 3.22
AP4E1-207ENST00000561441 SULT6B1Q6IMI4 303 aa35.16■■■■□ 3.22
AP4E1-207ENST00000561441 AEBP1Q8IUX7 1158 aa35.14■■■■□ 3.22
AP4E1-207ENST00000561441 PHACTR3Q96KR7 559 aa35.14■■■■□ 3.22
AP4E1-207ENST00000561441 SUPT16HQ9Y5B9 1047 aaKnown RBP35.14■■■■□ 3.22
AP4E1-207ENST00000561441 SLFN5Q08AF3 891 aa35.14■■■■□ 3.22
AP4E1-207ENST00000561441 NHSL1Q5SYE7 1610 aa35.13■■■■□ 3.21
AP4E1-207ENST00000561441 ZBTB7CA1YPR0 619 aa35.13■■■■□ 3.21
AP4E1-207ENST00000561441 EYA1Q99502 592 aa35.13■■■■□ 3.21
AP4E1-207ENST00000561441 IGSF1Q8N6C5 1336 aa35.12■■■■□ 3.21
AP4E1-207ENST00000561441 WDR63Q8IWG1 891 aa35.1■■■■□ 3.21
AP4E1-207ENST00000561441 TRMT2AQ8IZ69 625 aaKnown RBP35.1■■■■□ 3.21
AP4E1-207ENST00000561441 CABLES1Q8TDN4 633 aa35.1■■■■□ 3.21
AP4E1-207ENST00000561441 SPINK5Q9NQ38 1064 aaPredicted RBP35.1■■■■□ 3.21
AP4E1-207ENST00000561441 RIPK4P57078 832 aa35.09■■■■□ 3.21
AP4E1-207ENST00000561441 DUSP27Q5VZP5 1158 aa35.09■■■■□ 3.21
AP4E1-207ENST00000561441 LTV1Q96GA3 475 aaPredicted RBP35.09■■■■□ 3.21
AP4E1-207ENST00000561441 E9PSI1 815 aa35.08■■■■□ 3.21
AP4E1-207ENST00000561441 TRIM35Q9UPQ4 493 aa35.08■■■■□ 3.21
AP4E1-207ENST00000561441 KDRP35968 1356 aa35.08■■■■□ 3.21
AP4E1-207ENST00000561441 ZC3H6P61129 1189 aaKnown RBP35.07■■■■□ 3.21
AP4E1-207ENST00000561441 NFE2L2Q16236 605 aa35.07■■■■□ 3.21
AP4E1-207ENST00000561441 CRYBG1Q9Y4K1 1723 aa35.05■■■■□ 3.2
AP4E1-207ENST00000561441 ROBO1Q9Y6N7 1651 aa35.04■■■■□ 3.2
AP4E1-207ENST00000561441 AXIN2Q9Y2T1 843 aa35.01■■■■□ 3.19
AP4E1-207ENST00000561441 CPDO75976 1380 aa34.98■■■■□ 3.19
AP4E1-207ENST00000561441 AHDC1Q5TGY3 1603 aaPredicted RBP34.97■■■■□ 3.19
AP4E1-207ENST00000561441 RCAN3Q9UKA8 241 aa34.97■■■■□ 3.19
AP4E1-207ENST00000561441 NBPF6Q5VWK0 638 aa34.96■■■■□ 3.19
AP4E1-207ENST00000561441 ANKRD24Q8TF21 1146 aa34.96■■■■□ 3.19
AP4E1-207ENST00000561441 NBPF4Q96M43 638 aa34.96■■■■□ 3.19
AP4E1-207ENST00000561441 NEFLP07196 543 aa34.95■■■■□ 3.19
AP4E1-207ENST00000561441 TOM1O60784 492 aa34.95■■■■□ 3.18
AP4E1-207ENST00000561441 KIAA0232Q92628 1395 aa34.94■■■■□ 3.18
AP4E1-207ENST00000561441 LRRC59Q96AG4 307 aaKnown RBP34.93■■■■□ 3.18
AP4E1-207ENST00000561441 IL16Q14005 1332 aa34.93■■■■□ 3.18
AP4E1-207ENST00000561441 RNF123Q5XPI4 1314 aa34.93■■■■□ 3.18
AP4E1-207ENST00000561441 ABCC6O95255 1503 aa34.92■■■■□ 3.18
AP4E1-207ENST00000561441 USHBP1Q8N6Y0 703 aa34.92■■■■□ 3.18
AP4E1-207ENST00000561441 COL18A1P39060 1754 aa34.91■■■■□ 3.18
AP4E1-207ENST00000561441 LMOD3Q0VAK6 560 aa34.91■■■■□ 3.18
AP4E1-207ENST00000561441 FKBP8Q14318 412 aa34.91■■■■□ 3.18
AP4E1-207ENST00000561441 ERBB3P21860 1342 aa34.9■■■■□ 3.18
AP4E1-207ENST00000561441 CHRNA2Q15822 529 aa34.9■■■■□ 3.18
AP4E1-207ENST00000561441 MYH16Q9H6N6 1097 aa34.89■■■■□ 3.18
AP4E1-207ENST00000561441 NCAPD2Q15021 1401 aa34.88■■■■□ 3.17
AP4E1-207ENST00000561441 HAP1P54257 671 aaPredicted RBP34.88■■■■□ 3.17
AP4E1-207ENST00000561441 MTHFSDQ2M296 383 aaKnown RBP34.88■■■■□ 3.17
AP4E1-207ENST00000561441 ABCA3Q99758 1704 aa34.86■■■■□ 3.17
AP4E1-207ENST00000561441 RGPD5Q99666 1765 aa34.84■■■■□ 3.17
AP4E1-207ENST00000561441 CALD1Q05682 793 aaKnown RBP34.84■■■■□ 3.17
AP4E1-207ENST00000561441 GAS2L2Q8NHY3 880 aa34.84■■■■□ 3.17
AP4E1-207ENST00000561441 THUMPD2Q9BTF0 503 aaKnown RBP34.84■■■■□ 3.17
AP4E1-207ENST00000561441 PRDM11Q9NQV5 511 aa34.84■■■■□ 3.17
AP4E1-207ENST00000561441 PIP4K2BP78356 416 aa34.83■■■■□ 3.17
AP4E1-207ENST00000561441 RGPD2P0DJD1 1756 aa34.82■■■■□ 3.17
AP4E1-207ENST00000561441 DLG5Q8TDM6 1919 aa34.82■■■■□ 3.17
AP4E1-207ENST00000561441 FAM83GA6ND36 823 aa34.82■■■■□ 3.16
AP4E1-207ENST00000561441 CAMTA1Q9Y6Y1 1673 aa34.82■■■■□ 3.16
AP4E1-207ENST00000561441 UBAP1LF5GYI3 381 aa34.81■■■■□ 3.16
AP4E1-207ENST00000561441 FANCIQ9NVI1 1328 aa34.81■■■■□ 3.16
AP4E1-207ENST00000561441 IRX6P78412 446 aaPredicted RBP34.8■■■■□ 3.16
AP4E1-207ENST00000561441 TSR2Q969E8 191 aaKnown RBP34.79■■■■□ 3.16
AP4E1-207ENST00000561441 LMO7Q8WWI1 1683 aa34.78■■■■□ 3.16
AP4E1-207ENST00000561441 DCTN1Q14203 1278 aa34.78■■■■□ 3.16
AP4E1-207ENST00000561441 RRP1P56182 461 aaKnown RBP34.77■■■■□ 3.16
AP4E1-207ENST00000561441 CSB-PGBD3P0DP91 1061 aa34.76■■■■□ 3.15
AP4E1-207ENST00000561441 IFT57Q9NWB7 429 aa34.76■■■■□ 3.15
AP4E1-207ENST00000561441 NLRP2Q9NX02 1062 aa34.76■■■■□ 3.15
AP4E1-207ENST00000561441 COL16A1Q07092 1604 aaPredicted RBP34.76■■■■□ 3.15
AP4E1-207ENST00000561441 PHLPP1O60346 1717 aa34.76■■■■□ 3.15
AP4E1-207ENST00000561441 COL22A1Q8NFW1 1626 aaPredicted RBP34.75■■■■□ 3.15
AP4E1-207ENST00000561441 ZNF853P0CG23 659 aa34.74■■■■□ 3.15
AP4E1-207ENST00000561441 MCM10Q7L590 875 aa34.73■■■■□ 3.15
AP4E1-207ENST00000561441 HTATSF1O43719 755 aaKnown RBP34.73■■■■□ 3.15
AP4E1-207ENST00000561441 GNAI1P63096 354 aa34.73■■■■□ 3.15
AP4E1-207ENST00000561441 CERKQ8TCT0 537 aa34.73■■■■□ 3.15
AP4E1-207ENST00000561441 LAS1LQ9Y4W2 734 aaKnown RBP34.72■■■■□ 3.15
AP4E1-207ENST00000561441 RTF1Q92541 710 aaKnown RBP34.71■■■■□ 3.15
AP4E1-207ENST00000561441 CFAP44Q96MT7 982 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms