RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
CHRNA3-208ENST00000561128 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
CHRNA3-208ENST00000561128 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
CHRNA3-208ENST00000561128 ABCC6O95255 1503 aa17.83■□□□□ 0.45
CHRNA3-208ENST00000561128 ANKRD36BQ8N2N9 1353 aa17.83■□□□□ 0.45
CHRNA3-208ENST00000561128 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
CHRNA3-208ENST00000561128 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
CHRNA3-208ENST00000561128 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.44
CHRNA3-208ENST00000561128 RGPD1P0DJD0 1748 aa17.83■□□□□ 0.44
CHRNA3-208ENST00000561128 EVA1CP58658 441 aa17.82■□□□□ 0.44
CHRNA3-208ENST00000561128 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
CHRNA3-208ENST00000561128 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
CHRNA3-208ENST00000561128 FBLN1P23142 703 aa17.8■□□□□ 0.44
CHRNA3-208ENST00000561128 TCP11L2Q8N4U5 519 aa17.8■□□□□ 0.44
CHRNA3-208ENST00000561128 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
CHRNA3-208ENST00000561128 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
CHRNA3-208ENST00000561128 WDR17Q8IZU2 1322 aa17.79■□□□□ 0.44
CHRNA3-208ENST00000561128 TMF1P82094 1093 aa17.79■□□□□ 0.44
CHRNA3-208ENST00000561128 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
CHRNA3-208ENST00000561128 CARD14Q9BXL6 1004 aa17.76■□□□□ 0.43
CHRNA3-208ENST00000561128 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
CHRNA3-208ENST00000561128 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
CHRNA3-208ENST00000561128 RGPD2P0DJD1 1756 aa17.75■□□□□ 0.43
CHRNA3-208ENST00000561128 ERBB3P21860 1342 aa17.74■□□□□ 0.43
CHRNA3-208ENST00000561128 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
CHRNA3-208ENST00000561128 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
CHRNA3-208ENST00000561128 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
CHRNA3-208ENST00000561128 SBF2Q86WG5 1849 aa17.73■□□□□ 0.43
CHRNA3-208ENST00000561128 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
CHRNA3-208ENST00000561128 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
CHRNA3-208ENST00000561128 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
CHRNA3-208ENST00000561128 RREB1Q92766 1687 aa17.72■□□□□ 0.43
CHRNA3-208ENST00000561128 FYB1O15117 783 aa17.72■□□□□ 0.43
CHRNA3-208ENST00000561128 TRIM37O94972 964 aa17.71■□□□□ 0.43
CHRNA3-208ENST00000561128 PTF1AQ7RTS3 328 aa17.71■□□□□ 0.43
CHRNA3-208ENST00000561128 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
CHRNA3-208ENST00000561128 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
CHRNA3-208ENST00000561128 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
CHRNA3-208ENST00000561128 EN1Q05925 392 aaPredicted RBP17.7■□□□□ 0.42
CHRNA3-208ENST00000561128 CARD10Q9BWT7 1032 aa17.7■□□□□ 0.42
CHRNA3-208ENST00000561128 TNS2Q63HR2 1409 aa17.7■□□□□ 0.42
CHRNA3-208ENST00000561128 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
CHRNA3-208ENST00000561128 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
CHRNA3-208ENST00000561128 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
CHRNA3-208ENST00000561128 PDE3BQ13370 1112 aa17.68■□□□□ 0.42
CHRNA3-208ENST00000561128 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
CHRNA3-208ENST00000561128 MARCH10Q8NA82 808 aaPredicted RBP17.68■□□□□ 0.42
CHRNA3-208ENST00000561128 COG3Q96JB2 828 aa17.68■□□□□ 0.42
CHRNA3-208ENST00000561128 SHANK3Q9BYB0 1731 aa17.68■□□□□ 0.42
CHRNA3-208ENST00000561128 CCDC7Q96M83 1385 aa17.67■□□□□ 0.42
CHRNA3-208ENST00000561128 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
CHRNA3-208ENST00000561128 SF3B2Q13435 895 aaKnown RBP17.67■□□□□ 0.42
CHRNA3-208ENST00000561128 FAM196AQ6ZSG2 479 aa17.67■□□□□ 0.42
CHRNA3-208ENST00000561128 HOXC9P31274 260 aa17.66■□□□□ 0.42
CHRNA3-208ENST00000561128 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
CHRNA3-208ENST00000561128 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
CHRNA3-208ENST00000561128 IP6K1Q92551 441 aa17.66■□□□□ 0.42
CHRNA3-208ENST00000561128 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
CHRNA3-208ENST00000561128 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
CHRNA3-208ENST00000561128 BAG6P46379 1132 aa17.65■□□□□ 0.42
CHRNA3-208ENST00000561128 DDB1Q16531 1140 aa17.65■□□□□ 0.42
CHRNA3-208ENST00000561128 CDCA8Q53HL2 280 aa17.65■□□□□ 0.42
CHRNA3-208ENST00000561128 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
CHRNA3-208ENST00000561128 MEGF6O75095 1541 aa17.64■□□□□ 0.41
CHRNA3-208ENST00000561128 CAMKK2Q96RR4 588 aa17.63■□□□□ 0.41
CHRNA3-208ENST00000561128 NHSQ6T4R5 1651 aa17.63■□□□□ 0.41
CHRNA3-208ENST00000561128 RTL1A6NKG5 1358 aa17.63■□□□□ 0.41
CHRNA3-208ENST00000561128 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
CHRNA3-208ENST00000561128 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
CHRNA3-208ENST00000561128 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
CHRNA3-208ENST00000561128 APBA3O96018 575 aa17.61■□□□□ 0.41
CHRNA3-208ENST00000561128 EMILIN1Q9Y6C2 1016 aa17.61■□□□□ 0.41
CHRNA3-208ENST00000561128 BCL9O00512 1426 aa17.6■□□□□ 0.41
CHRNA3-208ENST00000561128 AMPHP49418 695 aa17.59■□□□□ 0.41
CHRNA3-208ENST00000561128 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
CHRNA3-208ENST00000561128 IL2RBP14784 551 aa17.58■□□□□ 0.4
CHRNA3-208ENST00000561128 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
CHRNA3-208ENST00000561128 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
CHRNA3-208ENST00000561128 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.4
CHRNA3-208ENST00000561128 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
CHRNA3-208ENST00000561128 KCNQ2O43526 872 aa17.57■□□□□ 0.4
CHRNA3-208ENST00000561128 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
CHRNA3-208ENST00000561128 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
CHRNA3-208ENST00000561128 LRP5O75197 1615 aa17.57■□□□□ 0.4
CHRNA3-208ENST00000561128 BTAF1O14981 1849 aa17.56■□□□□ 0.4
CHRNA3-208ENST00000561128 INSRP06213 1382 aa17.56■□□□□ 0.4
CHRNA3-208ENST00000561128 FLT4P35916 1363 aa17.56■□□□□ 0.4
CHRNA3-208ENST00000561128 PANK3Q9H999 370 aa17.56■□□□□ 0.4
CHRNA3-208ENST00000561128 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
CHRNA3-208ENST00000561128 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
CHRNA3-208ENST00000561128 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
CHRNA3-208ENST00000561128 EXOC5O00471 708 aa17.54■□□□□ 0.4
CHRNA3-208ENST00000561128 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
CHRNA3-208ENST00000561128 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
CHRNA3-208ENST00000561128 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
CHRNA3-208ENST00000561128 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
CHRNA3-208ENST00000561128 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.4
CHRNA3-208ENST00000561128 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.4
CHRNA3-208ENST00000561128 PAPPAQ13219 1627 aa17.52■□□□□ 0.4
CHRNA3-208ENST00000561128 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms