RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 AKAP12Q02952 1782 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 NME9Q86XW9 330 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
PSME1-208ENST00000561059 MARCH10Q8NA82 808 aaPredicted RBP19.05■□□□□ 0.64
PSME1-208ENST00000561059 SLC12A5Q9H2X9 1139 aa19.05■□□□□ 0.64
PSME1-208ENST00000561059 NFAT5O94916 1531 aa19.05■□□□□ 0.64
PSME1-208ENST00000561059 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
PSME1-208ENST00000561059 RREB1Q92766 1687 aa19.04■□□□□ 0.64
PSME1-208ENST00000561059 TONSLQ96HA7 1378 aa19.04■□□□□ 0.64
PSME1-208ENST00000561059 PEAK1Q9H792 1746 aa19.03■□□□□ 0.64
PSME1-208ENST00000561059 NBPF14Q5TI25 921 aa19.03■□□□□ 0.64
PSME1-208ENST00000561059 RGPD5Q99666 1765 aa19.03■□□□□ 0.64
PSME1-208ENST00000561059 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
PSME1-208ENST00000561059 CARD10Q9BWT7 1032 aa19.02■□□□□ 0.64
PSME1-208ENST00000561059 SBNO2Q9Y2G9 1366 aa19.01■□□□□ 0.63
PSME1-208ENST00000561059 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
PSME1-208ENST00000561059 ANO8Q9HCE9 1232 aaPredicted RBP18.99■□□□□ 0.63
PSME1-208ENST00000561059 HDGFL2Q7Z4V5 671 aaPredicted RBP18.98■□□□□ 0.63
PSME1-208ENST00000561059 BCL11BQ9C0K0 894 aaPredicted RBP18.98■□□□□ 0.63
PSME1-208ENST00000561059 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
PSME1-208ENST00000561059 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
PSME1-208ENST00000561059 NLRP2Q9NX02 1062 aa18.97■□□□□ 0.63
PSME1-208ENST00000561059 A0A1W2PP64 1363 aa18.96■□□□□ 0.63
PSME1-208ENST00000561059 EXOC5O00471 708 aa18.96■□□□□ 0.63
PSME1-208ENST00000561059 PROM2Q8N271 834 aa18.96■□□□□ 0.63
PSME1-208ENST00000561059 CDCA7Q9BWT1 371 aaPredicted RBP18.96■□□□□ 0.63
PSME1-208ENST00000561059 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
PSME1-208ENST00000561059 KCNQ2O43526 872 aa18.95■□□□□ 0.62
PSME1-208ENST00000561059 ACSBG1Q96GR2 724 aa18.95■□□□□ 0.62
PSME1-208ENST00000561059 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
PSME1-208ENST00000561059 SBF2Q86WG5 1849 aa18.95■□□□□ 0.62
PSME1-208ENST00000561059 ST20-MTHFSA0A0A6YYL1 179 aa18.94■□□□□ 0.62
PSME1-208ENST00000561059 PLSCR1O15162 318 aa18.94■□□□□ 0.62
PSME1-208ENST00000561059 ANKRD24Q8TF21 1146 aa18.94■□□□□ 0.62
PSME1-208ENST00000561059 ERBB3P21860 1342 aa18.94■□□□□ 0.62
PSME1-208ENST00000561059 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
PSME1-208ENST00000561059 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
PSME1-208ENST00000561059 FBLN1P23142 703 aa18.93■□□□□ 0.62
PSME1-208ENST00000561059 TERF2IPQ9NYB0 399 aa18.93■□□□□ 0.62
PSME1-208ENST00000561059 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
PSME1-208ENST00000561059 TESK2Q96S53 571 aa18.92■□□□□ 0.62
PSME1-208ENST00000561059 SPON1Q9HCB6 807 aa18.92■□□□□ 0.62
PSME1-208ENST00000561059 PPP1R1BQ9UD71 204 aaPredicted RBP18.92■□□□□ 0.62
PSME1-208ENST00000561059 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
PSME1-208ENST00000561059 LTN1O94822 1766 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 ZBTB7AO95365 584 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 IL2RBP14784 551 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 TXNRD1Q16881 649 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 BCL9O00512 1426 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 ABCC6O95255 1503 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 USP54Q70EL1 1684 aa18.89■□□□□ 0.61
PSME1-208ENST00000561059 RGPD3A6NKT7 1758 aaPredicted RBP18.86■□□□□ 0.61
PSME1-208ENST00000561059 RGPD4Q7Z3J3 1758 aa18.86■□□□□ 0.61
PSME1-208ENST00000561059 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
PSME1-208ENST00000561059 IP6K1Q92551 441 aa18.85■□□□□ 0.61
PSME1-208ENST00000561059 MAP3K19Q56UN5 1328 aa18.84■□□□□ 0.61
PSME1-208ENST00000561059 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
PSME1-208ENST00000561059 COG3Q96JB2 828 aa18.84■□□□□ 0.61
PSME1-208ENST00000561059 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
PSME1-208ENST00000561059 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
PSME1-208ENST00000561059 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
PSME1-208ENST00000561059 CASZ1Q86V15 1759 aa18.83■□□□□ 0.6
PSME1-208ENST00000561059 AMPHP49418 695 aa18.82■□□□□ 0.6
PSME1-208ENST00000561059 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
PSME1-208ENST00000561059 NHSQ6T4R5 1651 aa18.82■□□□□ 0.6
PSME1-208ENST00000561059 USP47Q96K76 1375 aa18.81■□□□□ 0.6
PSME1-208ENST00000561059 HOXC9P31274 260 aa18.81■□□□□ 0.6
PSME1-208ENST00000561059 RRS1Q15050 365 aaKnown RBP18.81■□□□□ 0.6
PSME1-208ENST00000561059 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
PSME1-208ENST00000561059 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
PSME1-208ENST00000561059 PTGER2P43116 358 aa18.79■□□□□ 0.6
PSME1-208ENST00000561059 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
PSME1-208ENST00000561059 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
PSME1-208ENST00000561059 KCNQ4P56696 695 aa18.78■□□□□ 0.6
PSME1-208ENST00000561059 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
PSME1-208ENST00000561059 LRRC4BQ9NT99 713 aa18.78■□□□□ 0.6
PSME1-208ENST00000561059 FYB1O15117 783 aa18.77■□□□□ 0.6
PSME1-208ENST00000561059 YY1P25490 414 aa18.77■□□□□ 0.6
PSME1-208ENST00000561059 TMF1P82094 1093 aa18.77■□□□□ 0.6
PSME1-208ENST00000561059 ZNF827Q17R98 1081 aa18.77■□□□□ 0.6
PSME1-208ENST00000561059 BTAF1O14981 1849 aa18.77■□□□□ 0.59
PSME1-208ENST00000561059 MYOM1P52179 1685 aa18.76■□□□□ 0.59
PSME1-208ENST00000561059 PRIM1P49642 420 aaKnown RBP18.75■□□□□ 0.59
PSME1-208ENST00000561059 UTRNP46939 3433 aa18.75■□□□□ 0.59
PSME1-208ENST00000561059 MEGF6O75095 1541 aa18.74■□□□□ 0.59
PSME1-208ENST00000561059 NBPF6Q5VWK0 638 aa18.74■□□□□ 0.59
PSME1-208ENST00000561059 NBPF4Q96M43 638 aa18.74■□□□□ 0.59
PSME1-208ENST00000561059 KAT6BQ8WYB5 2073 aa18.73■□□□□ 0.59
PSME1-208ENST00000561059 RGPD2P0DJD1 1756 aa18.73■□□□□ 0.59
PSME1-208ENST00000561059 FHDC1Q9C0D6 1143 aaPredicted RBP18.73■□□□□ 0.59
PSME1-208ENST00000561059 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
PSME1-208ENST00000561059 ZCRB1Q8TBF4 217 aaKnown RBP18.72■□□□□ 0.59
PSME1-208ENST00000561059 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
PSME1-208ENST00000561059 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
PSME1-208ENST00000561059 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms