RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 NEFLP07196 543 aa17.93■□□□□ 0.46
CSHL1-209ENST00000560999 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
CSHL1-209ENST00000560999 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
CSHL1-209ENST00000560999 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 USP6P35125 1406 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
CSHL1-209ENST00000560999 THSD7AQ9UPZ6 1657 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 ONECUT3O60422 494 aaPredicted RBP17.9■□□□□ 0.46
CSHL1-209ENST00000560999 KRT27Q7Z3Y8 459 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 DEFB132Q7Z7B7 95 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 ABTB2Q8N961 1025 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
CSHL1-209ENST00000560999 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.46
CSHL1-209ENST00000560999 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.46
CSHL1-209ENST00000560999 ERICH6BQ5W0A0 696 aa17.88■□□□□ 0.45
CSHL1-209ENST00000560999 LMO7Q8WWI1 1683 aa17.88■□□□□ 0.45
CSHL1-209ENST00000560999 SSH2Q76I76 1423 aa17.87■□□□□ 0.45
CSHL1-209ENST00000560999 NLRP13Q86W25 1043 aa17.87■□□□□ 0.45
CSHL1-209ENST00000560999 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
CSHL1-209ENST00000560999 FYB1O15117 783 aa17.87■□□□□ 0.45
CSHL1-209ENST00000560999 CAMTA1Q9Y6Y1 1673 aa17.86■□□□□ 0.45
CSHL1-209ENST00000560999 USP19O94966 1318 aa17.86■□□□□ 0.45
CSHL1-209ENST00000560999 SRCAPQ6ZRS2 3230 aa17.86■□□□□ 0.45
CSHL1-209ENST00000560999 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
CSHL1-209ENST00000560999 CCDC125Q86Z20 511 aa17.85■□□□□ 0.45
CSHL1-209ENST00000560999 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
CSHL1-209ENST00000560999 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
CSHL1-209ENST00000560999 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
CSHL1-209ENST00000560999 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
CSHL1-209ENST00000560999 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
CSHL1-209ENST00000560999 SPATA31A1Q5TZJ5 1347 aa17.84■□□□□ 0.45
CSHL1-209ENST00000560999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.83■□□□□ 0.45
CSHL1-209ENST00000560999 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
CSHL1-209ENST00000560999 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.44
CSHL1-209ENST00000560999 GGNBP2Q9H3C7 697 aa17.83■□□□□ 0.44
CSHL1-209ENST00000560999 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
CSHL1-209ENST00000560999 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
CSHL1-209ENST00000560999 SLIT3O75094 1523 aa17.82■□□□□ 0.44
CSHL1-209ENST00000560999 GCP02774 474 aa17.81■□□□□ 0.44
CSHL1-209ENST00000560999 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
CSHL1-209ENST00000560999 LARP1Q6PKG0 1096 aaKnown RBP17.81■□□□□ 0.44
CSHL1-209ENST00000560999 CPDO75976 1380 aa17.81■□□□□ 0.44
CSHL1-209ENST00000560999 USP54Q70EL1 1684 aa17.81■□□□□ 0.44
CSHL1-209ENST00000560999 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
CSHL1-209ENST00000560999 RGPD1P0DJD0 1748 aa17.8■□□□□ 0.44
CSHL1-209ENST00000560999 NLRP6P59044 892 aa17.8■□□□□ 0.44
CSHL1-209ENST00000560999 NME9Q86XW9 330 aa17.8■□□□□ 0.44
CSHL1-209ENST00000560999 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
CSHL1-209ENST00000560999 EVA1CP58658 441 aa17.79■□□□□ 0.44
CSHL1-209ENST00000560999 OVOS2A0A0J9YW53 1432 aa17.78■□□□□ 0.44
CSHL1-209ENST00000560999 OVOS2Q6IE36 1432 aa17.78■□□□□ 0.44
CSHL1-209ENST00000560999 USP31Q70CQ4 1352 aa17.78■□□□□ 0.44
CSHL1-209ENST00000560999 COG3Q96JB2 828 aa17.77■□□□□ 0.44
CSHL1-209ENST00000560999 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.43
CSHL1-209ENST00000560999 SOX12O15370 315 aa17.76■□□□□ 0.43
CSHL1-209ENST00000560999 COL18A1P39060 1754 aa17.76■□□□□ 0.43
CSHL1-209ENST00000560999 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
CSHL1-209ENST00000560999 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
CSHL1-209ENST00000560999 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
CSHL1-209ENST00000560999 EN1Q05925 392 aaPredicted RBP17.74■□□□□ 0.43
CSHL1-209ENST00000560999 MAP2P11137 1827 aaKnown RBP17.74■□□□□ 0.43
CSHL1-209ENST00000560999 BAG6P46379 1132 aa17.73■□□□□ 0.43
CSHL1-209ENST00000560999 FKBP8Q14318 412 aa17.73■□□□□ 0.43
CSHL1-209ENST00000560999 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
CSHL1-209ENST00000560999 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
CSHL1-209ENST00000560999 TRIM37O94972 964 aa17.72■□□□□ 0.43
CSHL1-209ENST00000560999 MTHFSP49914 203 aa17.72■□□□□ 0.43
CSHL1-209ENST00000560999 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
CSHL1-209ENST00000560999 TCP11L2Q8N4U5 519 aa17.72■□□□□ 0.43
CSHL1-209ENST00000560999 CRB1P82279 1406 aa17.71■□□□□ 0.43
CSHL1-209ENST00000560999 NFAT5O94916 1531 aa17.71■□□□□ 0.43
CSHL1-209ENST00000560999 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
CSHL1-209ENST00000560999 WNK3Q9BYP7 1800 aa17.71■□□□□ 0.43
CSHL1-209ENST00000560999 PDE3BQ13370 1112 aa17.71■□□□□ 0.43
CSHL1-209ENST00000560999 AXIN2Q9Y2T1 843 aa17.71■□□□□ 0.43
CSHL1-209ENST00000560999 CFAP53Q96M91 514 aa17.69■□□□□ 0.42
CSHL1-209ENST00000560999 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
CSHL1-209ENST00000560999 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
CSHL1-209ENST00000560999 NUDCQ9Y266 331 aa17.68■□□□□ 0.42
CSHL1-209ENST00000560999 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
CSHL1-209ENST00000560999 FAM196AQ6ZSG2 479 aa17.67■□□□□ 0.42
CSHL1-209ENST00000560999 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
CSHL1-209ENST00000560999 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
CSHL1-209ENST00000560999 COL3A1P02461 1466 aaPredicted RBP17.67■□□□□ 0.42
CSHL1-209ENST00000560999 PEAK1Q9H792 1746 aa17.66■□□□□ 0.42
CSHL1-209ENST00000560999 LTN1O94822 1766 aa17.65■□□□□ 0.42
CSHL1-209ENST00000560999 APBA3O96018 575 aa17.65■□□□□ 0.42
CSHL1-209ENST00000560999 THRAP3Q9Y2W1 955 aaKnown RBP17.65■□□□□ 0.42
CSHL1-209ENST00000560999 WDR17Q8IZU2 1322 aa17.64■□□□□ 0.42
CSHL1-209ENST00000560999 RREB1Q92766 1687 aa17.64■□□□□ 0.41
CSHL1-209ENST00000560999 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
CSHL1-209ENST00000560999 NUP188Q5SRE5 1749 aa17.64■□□□□ 0.41
CSHL1-209ENST00000560999 FBLN1P23142 703 aa17.63■□□□□ 0.41
CSHL1-209ENST00000560999 R3HDM1Q15032 1099 aaKnown RBP17.63■□□□□ 0.41
CSHL1-209ENST00000560999 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
CSHL1-209ENST00000560999 CAMKK2Q96RR4 588 aa17.63■□□□□ 0.41
CSHL1-209ENST00000560999 LRP5O75197 1615 aa17.63■□□□□ 0.41
CSHL1-209ENST00000560999 NGEFQ8N5V2 710 aa17.62■□□□□ 0.41
CSHL1-209ENST00000560999 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
CSHL1-209ENST00000560999 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms