RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 SLFNL1Q499Z3 407 aa10.04□□□□□ -0.8
HMG20A-211ENST00000560867 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
HMG20A-211ENST00000560867 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
HMG20A-211ENST00000560867 MRGPRX2Q96LB1 330 aa10.03□□□□□ -0.8
HMG20A-211ENST00000560867 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
HMG20A-211ENST00000560867 DHX9Q08211 1270 aaKnown RBP10.02□□□□□ -0.81
HMG20A-211ENST00000560867 NR5A1Q13285 461 aa10.02□□□□□ -0.81
HMG20A-211ENST00000560867 VASH1Q7L8A9 365 aaPredicted RBP10.02□□□□□ -0.81
HMG20A-211ENST00000560867 ADH1CP00326 375 aa10.01□□□□□ -0.81
HMG20A-211ENST00000560867 RNF135Q8IUD6 432 aa10.01□□□□□ -0.81
HMG20A-211ENST00000560867 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
HMG20A-211ENST00000560867 UCN2Q96RP3 112 aa10.01□□□□□ -0.81
HMG20A-211ENST00000560867 KCTD15Q96SI1 283 aaPredicted RBP10.01□□□□□ -0.81
HMG20A-211ENST00000560867 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
HMG20A-211ENST00000560867 PKD2L1Q9P0L9 805 aa10.01□□□□□ -0.81
HMG20A-211ENST00000560867 ATP9BO43861 1147 aa10□□□□□ -0.81
HMG20A-211ENST00000560867 GDF9O60383 454 aa10□□□□□ -0.81
HMG20A-211ENST00000560867 PLEKHM2Q8IWE5 1019 aa10□□□□□ -0.81
HMG20A-211ENST00000560867 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
HMG20A-211ENST00000560867 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
HMG20A-211ENST00000560867 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
HMG20A-211ENST00000560867 CYP4X1Q8N118 509 aa9.97□□□□□ -0.81
HMG20A-211ENST00000560867 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
HMG20A-211ENST00000560867 TLL2Q9Y6L7 1015 aa9.97□□□□□ -0.81
HMG20A-211ENST00000560867 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.82
HMG20A-211ENST00000560867 GRM5P41594 1212 aa9.96□□□□□ -0.82
HMG20A-211ENST00000560867 INTS6LQ5JSJ4 861 aaKnown RBP9.96□□□□□ -0.82
HMG20A-211ENST00000560867 PLPP7Q8NBV4 271 aa9.96□□□□□ -0.82
HMG20A-211ENST00000560867 TOR4AQ9NXH8 423 aa9.96□□□□□ -0.82
HMG20A-211ENST00000560867 MAFBQ9Y5Q3 323 aaPredicted RBP9.96□□□□□ -0.82
HMG20A-211ENST00000560867 SKIP12755 728 aa9.95□□□□□ -0.82
HMG20A-211ENST00000560867 FSHRP23945 695 aa9.95□□□□□ -0.82
HMG20A-211ENST00000560867 FOXC1Q12948 553 aa9.95□□□□□ -0.82
HMG20A-211ENST00000560867 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
HMG20A-211ENST00000560867 USP17L5A8MUK1 530 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 ARID5BQ14865 1188 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
HMG20A-211ENST00000560867 DOLKQ9UPQ8 538 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 EMILIN1Q9Y6C2 1016 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 WASF2Q9Y6W5 498 aa9.94□□□□□ -0.82
HMG20A-211ENST00000560867 ALDH1A1P00352 501 aa9.93□□□□□ -0.82
HMG20A-211ENST00000560867 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
HMG20A-211ENST00000560867 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
HMG20A-211ENST00000560867 TRIM67Q6ZTA4 783 aa9.93□□□□□ -0.82
HMG20A-211ENST00000560867 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 PIK3CDO00329 1044 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 EML3Q32P44 896 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 PBXIP1Q96AQ6 731 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
HMG20A-211ENST00000560867 ATP5J2-PTCD1G3V325 749 aa9.91□□□□□ -0.82
HMG20A-211ENST00000560867 USP4Q13107 963 aa9.91□□□□□ -0.82
HMG20A-211ENST00000560867 LAPTM4AQ15012 233 aa9.91□□□□□ -0.82
HMG20A-211ENST00000560867 TRIM50Q86XT4 487 aa9.91□□□□□ -0.82
HMG20A-211ENST00000560867 NNTQ13423 1086 aa9.9□□□□□ -0.82
HMG20A-211ENST00000560867 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
HMG20A-211ENST00000560867 PCDHB11Q9Y5F2 797 aa9.9□□□□□ -0.82
HMG20A-211ENST00000560867 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
HMG20A-211ENST00000560867 TNFRSF10AO00220 468 aa9.89□□□□□ -0.83
HMG20A-211ENST00000560867 MYCP01106 439 aaPredicted RBP9.89□□□□□ -0.83
HMG20A-211ENST00000560867 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
HMG20A-211ENST00000560867 ERVK-9P63128 1117 aa9.89□□□□□ -0.83
HMG20A-211ENST00000560867 NOD1Q9Y239 953 aa9.89□□□□□ -0.83
HMG20A-211ENST00000560867 ATP1A2P50993 1020 aa9.88□□□□□ -0.83
HMG20A-211ENST00000560867 NCOA4Q13772 614 aa9.88□□□□□ -0.83
HMG20A-211ENST00000560867 PPP1R26Q5T8A7 1209 aaPredicted RBP9.88□□□□□ -0.83
HMG20A-211ENST00000560867 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
HMG20A-211ENST00000560867 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
HMG20A-211ENST00000560867 SMPD1P17405 629 aa9.87□□□□□ -0.83
HMG20A-211ENST00000560867 MYT1Q01538 1121 aa9.87□□□□□ -0.83
HMG20A-211ENST00000560867 ARID3AQ99856 593 aa9.87□□□□□ -0.83
HMG20A-211ENST00000560867 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
HMG20A-211ENST00000560867 NR3C2P08235 984 aa9.86□□□□□ -0.83
HMG20A-211ENST00000560867 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
HMG20A-211ENST00000560867 ESF1Q9H501 851 aaKnown RBP9.86□□□□□ -0.83
HMG20A-211ENST00000560867 FAM196BA6NMK8 535 aa9.85□□□□□ -0.83
HMG20A-211ENST00000560867 J3QL48 77 aa9.85□□□□□ -0.83
HMG20A-211ENST00000560867 NRG2O14511 850 aaPredicted RBP9.85□□□□□ -0.83
HMG20A-211ENST00000560867 ATG7O95352 703 aa9.84□□□□□ -0.83
HMG20A-211ENST00000560867 PDE4CQ08493 712 aa9.84□□□□□ -0.83
HMG20A-211ENST00000560867 ELOAQ14241 798 aaKnown RBP9.84□□□□□ -0.83
HMG20A-211ENST00000560867 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
HMG20A-211ENST00000560867 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
HMG20A-211ENST00000560867 CYP2U1Q7Z449 544 aa9.84□□□□□ -0.83
HMG20A-211ENST00000560867 ARXQ96QS3 562 aa9.84□□□□□ -0.83
HMG20A-211ENST00000560867 MKRN1Q9UHC7 482 aaKnown RBP9.84□□□□□ -0.83
HMG20A-211ENST00000560867 ACIN1Q9UKV3 1341 aaKnown RBP9.83□□□□□ -0.84
HMG20A-211ENST00000560867 AVPP01185 164 aa9.83□□□□□ -0.84
HMG20A-211ENST00000560867 RAB15P59190 212 aa9.83□□□□□ -0.84
HMG20A-211ENST00000560867 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
HMG20A-211ENST00000560867 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
HMG20A-211ENST00000560867 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
HMG20A-211ENST00000560867 LILRA1O75019 489 aa9.82□□□□□ -0.84
HMG20A-211ENST00000560867 DGAT1O75907 488 aa9.82□□□□□ -0.84
HMG20A-211ENST00000560867 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms