RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 PPP1R1BQ9UD71 204 aaPredicted RBP11.04□□□□□ -0.64
APH1B-209ENST00000560716 CCDC61Q9Y6R9 512 aa11.04□□□□□ -0.64
APH1B-209ENST00000560716 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
APH1B-209ENST00000560716 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
APH1B-209ENST00000560716 ZNF784Q8NCA9 323 aaPredicted RBP11.03□□□□□ -0.64
APH1B-209ENST00000560716 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
APH1B-209ENST00000560716 ACEP12821 1306 aa11.03□□□□□ -0.64
APH1B-209ENST00000560716 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
APH1B-209ENST00000560716 NHSQ6T4R5 1651 aa11.02□□□□□ -0.64
APH1B-209ENST00000560716 GCP02774 474 aa11.02□□□□□ -0.65
APH1B-209ENST00000560716 PROM2Q8N271 834 aa11.02□□□□□ -0.65
APH1B-209ENST00000560716 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
APH1B-209ENST00000560716 ABCC6O95255 1503 aa11.02□□□□□ -0.65
APH1B-209ENST00000560716 UTRNP46939 3433 aa11.02□□□□□ -0.65
APH1B-209ENST00000560716 NLRP13Q86W25 1043 aa11.01□□□□□ -0.65
APH1B-209ENST00000560716 CDCA7Q9BWT1 371 aaPredicted RBP11.01□□□□□ -0.65
APH1B-209ENST00000560716 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
APH1B-209ENST00000560716 ABTB2Q8N961 1025 aa11□□□□□ -0.65
APH1B-209ENST00000560716 CDK19Q9BWU1 502 aa11□□□□□ -0.65
APH1B-209ENST00000560716 USP35Q9P2H5 1018 aa11□□□□□ -0.65
APH1B-209ENST00000560716 PIK3C2AO00443 1686 aa11□□□□□ -0.65
APH1B-209ENST00000560716 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
APH1B-209ENST00000560716 QRICH2Q9H0J4 1663 aa10.99□□□□□ -0.65
APH1B-209ENST00000560716 SYT17Q9BSW7 474 aa10.99□□□□□ -0.65
APH1B-209ENST00000560716 C1QTNF8P60827 252 aa10.98□□□□□ -0.65
APH1B-209ENST00000560716 DDB1Q16531 1140 aa10.98□□□□□ -0.65
APH1B-209ENST00000560716 MTFR1LQ9H019 292 aa10.98□□□□□ -0.65
APH1B-209ENST00000560716 SLC15A2Q16348 729 aa10.97□□□□□ -0.65
APH1B-209ENST00000560716 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
APH1B-209ENST00000560716 PDGFDQ9GZP0 370 aaPredicted RBP10.97□□□□□ -0.65
APH1B-209ENST00000560716 WDR17Q8IZU2 1322 aa10.97□□□□□ -0.65
APH1B-209ENST00000560716 USP6P35125 1406 aa10.97□□□□□ -0.65
APH1B-209ENST00000560716 BTAF1O14981 1849 aa10.96□□□□□ -0.65
APH1B-209ENST00000560716 MARCH10Q8NA82 808 aaPredicted RBP10.96□□□□□ -0.65
APH1B-209ENST00000560716 DCAF11Q8TEB1 546 aa10.96□□□□□ -0.65
APH1B-209ENST00000560716 PPIP5K1Q6PFW1 1433 aa10.95□□□□□ -0.66
APH1B-209ENST00000560716 TXNRD1Q16881 649 aa10.95□□□□□ -0.66
APH1B-209ENST00000560716 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
APH1B-209ENST00000560716 PTF1AQ7RTS3 328 aa10.95□□□□□ -0.66
APH1B-209ENST00000560716 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
APH1B-209ENST00000560716 FHDC1Q9C0D6 1143 aaPredicted RBP10.95□□□□□ -0.66
APH1B-209ENST00000560716 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
APH1B-209ENST00000560716 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
APH1B-209ENST00000560716 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
APH1B-209ENST00000560716 NFAT5O94916 1531 aa10.94□□□□□ -0.66
APH1B-209ENST00000560716 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
APH1B-209ENST00000560716 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
APH1B-209ENST00000560716 ZBTB7AO95365 584 aa10.93□□□□□ -0.66
APH1B-209ENST00000560716 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
APH1B-209ENST00000560716 STK32BQ9NY57 414 aa10.93□□□□□ -0.66
APH1B-209ENST00000560716 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
APH1B-209ENST00000560716 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
APH1B-209ENST00000560716 LY75O60449 1722 aa10.92□□□□□ -0.66
APH1B-209ENST00000560716 MON2Q7Z3U7 1717 aa10.92□□□□□ -0.66
APH1B-209ENST00000560716 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
APH1B-209ENST00000560716 TOM1L2Q6ZVM7 507 aa10.91□□□□□ -0.66
APH1B-209ENST00000560716 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
APH1B-209ENST00000560716 ARXQ96QS3 562 aa10.91□□□□□ -0.66
APH1B-209ENST00000560716 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
APH1B-209ENST00000560716 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.66
APH1B-209ENST00000560716 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
APH1B-209ENST00000560716 FAM208AQ9UK61 1670 aaKnown RBP10.89□□□□□ -0.67
APH1B-209ENST00000560716 EXOC5O00471 708 aa10.89□□□□□ -0.67
APH1B-209ENST00000560716 NLRP6P59044 892 aa10.89□□□□□ -0.67
APH1B-209ENST00000560716 LTN1O94822 1766 aa10.89□□□□□ -0.67
APH1B-209ENST00000560716 TTC21AQ8NDW8 1320 aa10.88□□□□□ -0.67
APH1B-209ENST00000560716 CENPJQ9HC77 1338 aaPredicted RBP10.88□□□□□ -0.67
APH1B-209ENST00000560716 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
APH1B-209ENST00000560716 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
APH1B-209ENST00000560716 USP31Q70CQ4 1352 aa10.87□□□□□ -0.67
APH1B-209ENST00000560716 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
APH1B-209ENST00000560716 CABP1Q9NZU7 370 aa10.86□□□□□ -0.67
APH1B-209ENST00000560716 TTC21BQ7Z4L5 1316 aa10.85□□□□□ -0.67
APH1B-209ENST00000560716 KAT6BQ8WYB5 2073 aa10.85□□□□□ -0.67
APH1B-209ENST00000560716 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
APH1B-209ENST00000560716 SRPK2P78362 688 aaKnown RBP10.85□□□□□ -0.67
APH1B-209ENST00000560716 NBPF1Q3BBV0 1214 aa10.85□□□□□ -0.67
APH1B-209ENST00000560716 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
APH1B-209ENST00000560716 CABP2Q9NPB3 220 aa10.85□□□□□ -0.67
APH1B-209ENST00000560716 GOLGB1Q14789 3259 aaKnown RBP10.84□□□□□ -0.67
APH1B-209ENST00000560716 LRRC4BQ9NT99 713 aa10.84□□□□□ -0.67
APH1B-209ENST00000560716 ERBB3P21860 1342 aa10.84□□□□□ -0.67
APH1B-209ENST00000560716 ZNF827Q17R98 1081 aa10.83□□□□□ -0.68
APH1B-209ENST00000560716 TAF1LQ8IZX4 1826 aa10.82□□□□□ -0.68
APH1B-209ENST00000560716 PNPLA7Q6ZV29 1317 aa10.82□□□□□ -0.68
APH1B-209ENST00000560716 EVC2Q86UK5 1308 aa10.82□□□□□ -0.68
APH1B-209ENST00000560716 DOT1LQ8TEK3 1739 aa10.81□□□□□ -0.68
APH1B-209ENST00000560716 ADCY9O60503 1353 aa10.81□□□□□ -0.68
APH1B-209ENST00000560716 SBNO2Q9Y2G9 1366 aa10.81□□□□□ -0.68
APH1B-209ENST00000560716 GRIN3BO60391 1043 aa10.81□□□□□ -0.68
APH1B-209ENST00000560716 IL2RBP14784 551 aa10.81□□□□□ -0.68
APH1B-209ENST00000560716 GPR162Q16538 588 aa10.81□□□□□ -0.68
APH1B-209ENST00000560716 POLD1P28340 1107 aa10.79□□□□□ -0.68
APH1B-209ENST00000560716 CD163L1Q9NR16 1453 aa10.79□□□□□ -0.68
APH1B-209ENST00000560716 C5P01031 1676 aa10.79□□□□□ -0.68
APH1B-209ENST00000560716 NSD2O96028 1365 aa10.78□□□□□ -0.68
APH1B-209ENST00000560716 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
APH1B-209ENST00000560716 CSB-PGBD3P0DP91 1061 aa10.78□□□□□ -0.68
APH1B-209ENST00000560716 ANKRD36BQ8N2N9 1353 aa10.77□□□□□ -0.68
APH1B-209ENST00000560716 CICQ96RK0 1608 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms