RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 ARXQ96QS3 562 aa17.45■□□□□ 0.38
IVD-212ENST00000560660 SGIP1Q9BQI5 828 aa17.45■□□□□ 0.38
IVD-212ENST00000560660 POLR3AO14802 1390 aaPredicted RBP17.44■□□□□ 0.38
IVD-212ENST00000560660 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
IVD-212ENST00000560660 USP19O94966 1318 aa17.44■□□□□ 0.38
IVD-212ENST00000560660 ITSN1Q15811 1721 aa17.44■□□□□ 0.38
IVD-212ENST00000560660 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
IVD-212ENST00000560660 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
IVD-212ENST00000560660 CEP350Q5VT06 3117 aa17.43■□□□□ 0.38
IVD-212ENST00000560660 LRRC37A3O60309 1634 aa17.39■□□□□ 0.38
IVD-212ENST00000560660 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
IVD-212ENST00000560660 NLRP6P59044 892 aa17.37■□□□□ 0.37
IVD-212ENST00000560660 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
IVD-212ENST00000560660 CDCA7Q9BWT1 371 aaPredicted RBP17.37■□□□□ 0.37
IVD-212ENST00000560660 AXIN2Q9Y2T1 843 aa17.37■□□□□ 0.37
IVD-212ENST00000560660 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
IVD-212ENST00000560660 EXOC5O00471 708 aa17.36■□□□□ 0.37
IVD-212ENST00000560660 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
IVD-212ENST00000560660 BCL9O00512 1426 aa17.36■□□□□ 0.37
IVD-212ENST00000560660 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
IVD-212ENST00000560660 WDR17Q8IZU2 1322 aa17.34■□□□□ 0.37
IVD-212ENST00000560660 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.37
IVD-212ENST00000560660 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
IVD-212ENST00000560660 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
IVD-212ENST00000560660 CSB-PGBD3P0DP91 1061 aa17.32■□□□□ 0.36
IVD-212ENST00000560660 SRPK2P78362 688 aaKnown RBP17.32■□□□□ 0.36
IVD-212ENST00000560660 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
IVD-212ENST00000560660 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
IVD-212ENST00000560660 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
IVD-212ENST00000560660 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
IVD-212ENST00000560660 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
IVD-212ENST00000560660 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
IVD-212ENST00000560660 SOX12O15370 315 aa17.28■□□□□ 0.36
IVD-212ENST00000560660 POLD1P28340 1107 aa17.28■□□□□ 0.36
IVD-212ENST00000560660 CABP1Q9NZU7 370 aa17.28■□□□□ 0.36
IVD-212ENST00000560660 NLGN2Q8NFZ4 835 aa17.27■□□□□ 0.36
IVD-212ENST00000560660 LRRC4BQ9NT99 713 aa17.27■□□□□ 0.36
IVD-212ENST00000560660 COL18A1P39060 1754 aa17.27■□□□□ 0.35
IVD-212ENST00000560660 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
IVD-212ENST00000560660 ARHGEF25Q86VW2 580 aa17.26■□□□□ 0.35
IVD-212ENST00000560660 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
IVD-212ENST00000560660 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
IVD-212ENST00000560660 SLIT3O75094 1523 aa17.26■□□□□ 0.35
IVD-212ENST00000560660 SLC16A10Q8TF71 515 aa17.25■□□□□ 0.35
IVD-212ENST00000560660 YBX3P16989 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
IVD-212ENST00000560660 USP6P35125 1406 aa17.23■□□□□ 0.35
IVD-212ENST00000560660 GRIN3BO60391 1043 aa17.23■□□□□ 0.35
IVD-212ENST00000560660 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
IVD-212ENST00000560660 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
IVD-212ENST00000560660 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
IVD-212ENST00000560660 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
IVD-212ENST00000560660 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
IVD-212ENST00000560660 NHSQ6T4R5 1651 aa17.21■□□□□ 0.35
IVD-212ENST00000560660 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
IVD-212ENST00000560660 HSPA6P17066 643 aa17.21■□□□□ 0.35
IVD-212ENST00000560660 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
IVD-212ENST00000560660 TFCP2L1Q9NZI6 479 aa17.21■□□□□ 0.35
IVD-212ENST00000560660 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
IVD-212ENST00000560660 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.34
IVD-212ENST00000560660 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
IVD-212ENST00000560660 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
IVD-212ENST00000560660 ATP10DQ9P241 1426 aa17.2■□□□□ 0.34
IVD-212ENST00000560660 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
IVD-212ENST00000560660 KAT6BQ8WYB5 2073 aa17.18■□□□□ 0.34
IVD-212ENST00000560660 KCNQ4P56696 695 aa17.18■□□□□ 0.34
IVD-212ENST00000560660 ZNF526Q8TF50 670 aaPredicted RBP17.18■□□□□ 0.34
IVD-212ENST00000560660 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
IVD-212ENST00000560660 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
IVD-212ENST00000560660 TTC21BQ7Z4L5 1316 aa17.17■□□□□ 0.34
IVD-212ENST00000560660 BTAF1O14981 1849 aa17.17■□□□□ 0.34
IVD-212ENST00000560660 IL2RBP14784 551 aa17.16■□□□□ 0.34
IVD-212ENST00000560660 SLC27A3Q5K4L6 730 aa17.16■□□□□ 0.34
IVD-212ENST00000560660 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
IVD-212ENST00000560660 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
IVD-212ENST00000560660 MSH5O43196 834 aa17.14■□□□□ 0.33
IVD-212ENST00000560660 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
IVD-212ENST00000560660 ABCC6O95255 1503 aa17.12■□□□□ 0.33
IVD-212ENST00000560660 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
IVD-212ENST00000560660 COL24A1Q17RW2 1714 aa17.12■□□□□ 0.33
IVD-212ENST00000560660 SYTL4Q96C24 671 aaPredicted RBP17.11■□□□□ 0.33
IVD-212ENST00000560660 ERBB3P21860 1342 aa17.1■□□□□ 0.33
IVD-212ENST00000560660 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
IVD-212ENST00000560660 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
IVD-212ENST00000560660 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
IVD-212ENST00000560660 COL23A1Q86Y22 540 aaPredicted RBP17.09■□□□□ 0.33
IVD-212ENST00000560660 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
IVD-212ENST00000560660 NFAT5O94916 1531 aa17.08■□□□□ 0.32
IVD-212ENST00000560660 EVC2Q86UK5 1308 aa17.08■□□□□ 0.32
IVD-212ENST00000560660 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
IVD-212ENST00000560660 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.32
IVD-212ENST00000560660 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
IVD-212ENST00000560660 TUBGCP6Q96RT7 1819 aa17.06■□□□□ 0.32
IVD-212ENST00000560660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.06■□□□□ 0.32
IVD-212ENST00000560660 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
IVD-212ENST00000560660 ADCY9O60503 1353 aa17.05■□□□□ 0.32
IVD-212ENST00000560660 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
IVD-212ENST00000560660 WWC3Q9ULE0 1092 aa17.05■□□□□ 0.32
IVD-212ENST00000560660 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
IVD-212ENST00000560660 KIF3CO14782 793 aa17.04■□□□□ 0.32
IVD-212ENST00000560660 APLP1P51693 650 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms