RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 VARS2Q5ST30 1063 aaKnown RBP7.92□□□□□ -1.14
PCAT29-204ENST00000560655 HDGFL2Q7Z4V5 671 aaPredicted RBP7.92□□□□□ -1.14
PCAT29-204ENST00000560655 TXNDC2Q86VQ3 553 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 TCP11L2Q8N4U5 519 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 PDCD7Q8N8D1 485 aaKnown RBP7.92□□□□□ -1.14
PCAT29-204ENST00000560655 CFAP53Q96M91 514 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 PNPLA6Q8IY17 1366 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 ADAMTS13Q76LX8 1427 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 COL3A1P02461 1466 aaPredicted RBP7.92□□□□□ -1.14
PCAT29-204ENST00000560655 IQSEC2Q5JU85 1478 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 PTGER2P43116 358 aa7.91□□□□□ -1.14
PCAT29-204ENST00000560655 WDR63Q8IWG1 891 aa7.91□□□□□ -1.14
PCAT29-204ENST00000560655 PLEKHF1Q96S99 279 aa7.91□□□□□ -1.14
PCAT29-204ENST00000560655 CPSF1Q10570 1443 aaKnown RBP7.91□□□□□ -1.14
PCAT29-204ENST00000560655 UBR1Q8IWV7 1749 aa7.9□□□□□ -1.14
PCAT29-204ENST00000560655 NKTRP30414 1462 aaKnown RBP7.9□□□□□ -1.14
PCAT29-204ENST00000560655 ATP7BP35670 1465 aa7.9□□□□□ -1.14
PCAT29-204ENST00000560655 HOXB3P14651 431 aaPredicted RBP7.9□□□□□ -1.14
PCAT29-204ENST00000560655 NUDT16Q96DE0 195 aaKnown RBP7.9□□□□□ -1.14
PCAT29-204ENST00000560655 RRP7AQ9Y3A4 280 aaKnown RBP7.9□□□□□ -1.14
PCAT29-204ENST00000560655 PLEKHG1Q9ULL1 1385 aa7.89□□□□□ -1.15
PCAT29-204ENST00000560655 FANCIQ9NVI1 1328 aa7.89□□□□□ -1.15
PCAT29-204ENST00000560655 U2AF1L5P0DN76 240 aaPredicted RBP7.89□□□□□ -1.15
PCAT29-204ENST00000560655 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.15
PCAT29-204ENST00000560655 KNDC1Q76NI1 1749 aa7.89□□□□□ -1.15
PCAT29-204ENST00000560655 ARHGAP23Q9P227 1491 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 ROBO2Q9HCK4 1378 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 PRR36Q9H6K5 1346 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 NCKAP5LQ9HCH0 1330 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 BCAR3O75815 825 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 FBLN1P23142 703 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 ANKRD13DQ6ZTN6 518 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 POLKQ9UBT6 870 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 ANKRD26Q9UPS8 1709 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 CPS1P31327 1500 aa7.88□□□□□ -1.15
PCAT29-204ENST00000560655 PTPRUQ92729 1446 aa7.87□□□□□ -1.15
PCAT29-204ENST00000560655 KDM2BQ8NHM5 1336 aa7.87□□□□□ -1.15
PCAT29-204ENST00000560655 DIAPH1O60610 1272 aaKnown RBP7.87□□□□□ -1.15
PCAT29-204ENST00000560655 TMPOP42166 694 aaKnown RBP7.87□□□□□ -1.15
PCAT29-204ENST00000560655 NEUROD2Q15784 382 aa7.87□□□□□ -1.15
PCAT29-204ENST00000560655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.87□□□□□ -1.15
PCAT29-204ENST00000560655 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.87□□□□□ -1.15
PCAT29-204ENST00000560655 TBX22Q9Y458 520 aa7.87□□□□□ -1.15
PCAT29-204ENST00000560655 ADGRB2O60241 1585 aa7.87□□□□□ -1.15
PCAT29-204ENST00000560655 CDC42BPGQ6DT37 1551 aa7.87□□□□□ -1.15
PCAT29-204ENST00000560655 EDC4Q6P2E9 1401 aaKnown RBP7.86□□□□□ -1.15
PCAT29-204ENST00000560655 PPIP5K1Q6PFW1 1433 aa7.86□□□□□ -1.15
PCAT29-204ENST00000560655 PLEKHG3A1L390 1219 aa7.86□□□□□ -1.15
PCAT29-204ENST00000560655 TCERG1O14776 1098 aaKnown RBP7.86□□□□□ -1.15
PCAT29-204ENST00000560655 NUBP1P53384 320 aa7.86□□□□□ -1.15
PCAT29-204ENST00000560655 MKRN3Q13064 507 aaKnown RBP7.86□□□□□ -1.15
PCAT29-204ENST00000560655 NME9Q86XW9 330 aa7.86□□□□□ -1.15
PCAT29-204ENST00000560655 FAM212AQ96EL1 285 aa7.86□□□□□ -1.15
PCAT29-204ENST00000560655 SLIT1O75093 1534 aa7.86□□□□□ -1.15
PCAT29-204ENST00000560655 AATKQ6ZMQ8 1374 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 U2SURPO15042 1029 aaKnown RBP7.85□□□□□ -1.15
PCAT29-204ENST00000560655 FCHSD2O94868 740 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 RARSP54136 660 aaKnown RBP7.85□□□□□ -1.15
PCAT29-204ENST00000560655 PDE3AQ14432 1141 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 DOK7Q18PE1 504 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 ZNF687Q8N1G0 1237 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 PLCD3Q8N3E9 789 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 SLC26A8Q96RN1 970 aa7.85□□□□□ -1.15
PCAT29-204ENST00000560655 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.85□□□□□ -1.15
PCAT29-204ENST00000560655 IL16Q14005 1332 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 C3P01024 1663 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 IL13P35225 146 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 THEMISQ8N1K5 641 aaPredicted RBP7.84□□□□□ -1.15
PCAT29-204ENST00000560655 RSPH6AQ9H0K4 717 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.15
PCAT29-204ENST00000560655 PCDHB8Q9UN66 801 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 AMOTL2Q9Y2J4 779 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 EID1Q9Y6B2 187 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 KIF20BQ96Q89 1820 aa7.84□□□□□ -1.15
PCAT29-204ENST00000560655 MS4A1P11836 297 aa7.83□□□□□ -1.16
PCAT29-204ENST00000560655 PNNQ9H307 717 aaKnown RBP7.83□□□□□ -1.16
PCAT29-204ENST00000560655 MYH16Q9H6N6 1097 aa7.83□□□□□ -1.16
PCAT29-204ENST00000560655 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
PCAT29-204ENST00000560655 TTC21BQ7Z4L5 1316 aa7.82□□□□□ -1.16
PCAT29-204ENST00000560655 CT47B1P0C2W7 299 aaPredicted RBP7.82□□□□□ -1.16
PCAT29-204ENST00000560655 RIPK4P57078 832 aa7.82□□□□□ -1.16
PCAT29-204ENST00000560655 SSH2Q76I76 1423 aa7.82□□□□□ -1.16
PCAT29-204ENST00000560655 CENPQQ7L2Z9 268 aaPredicted RBP7.82□□□□□ -1.16
PCAT29-204ENST00000560655 MON2Q7Z3U7 1717 aa7.82□□□□□ -1.16
PCAT29-204ENST00000560655 PHACTR3Q96KR7 559 aa7.82□□□□□ -1.16
PCAT29-204ENST00000560655 AKAP12Q02952 1782 aa7.82□□□□□ -1.16
PCAT29-204ENST00000560655 ACEP12821 1306 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 IGHDP01880 384 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 PDE4AP27815 886 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 EXOSC9Q06265 439 aaKnown RBP7.81□□□□□ -1.16
PCAT29-204ENST00000560655 SKAP1Q86WV1 359 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 PANK1Q8TE04 598 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 COG3Q96JB2 828 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 BACH2Q9BYV9 841 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 TNNQ9UQP3 1299 aa7.81□□□□□ -1.16
PCAT29-204ENST00000560655 MAPK8IP3Q9UPT6 1336 aa7.8□□□□□ -1.16
PCAT29-204ENST00000560655 PTCH1Q13635 1447 aa7.8□□□□□ -1.16
PCAT29-204ENST00000560655 G3V3G9 751 aa7.8□□□□□ -1.16
PCAT29-204ENST00000560655 RIMBP2O15034 1052 aa7.8□□□□□ -1.16
PCAT29-204ENST00000560655 PYGBP11216 843 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms