RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
HERC1-209ENST00000560519 BCL9O00512 1426 aa13.88□□□□□ -0.19
HERC1-209ENST00000560519 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
HERC1-209ENST00000560519 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
HERC1-209ENST00000560519 DDB1Q16531 1140 aa13.87□□□□□ -0.19
HERC1-209ENST00000560519 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
HERC1-209ENST00000560519 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
HERC1-209ENST00000560519 MYOM1P52179 1685 aa13.87□□□□□ -0.19
HERC1-209ENST00000560519 WDR17Q8IZU2 1322 aa13.87□□□□□ -0.19
HERC1-209ENST00000560519 NFAT5O94916 1531 aa13.86□□□□□ -0.19
HERC1-209ENST00000560519 NLRP6P59044 892 aa13.86□□□□□ -0.19
HERC1-209ENST00000560519 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
HERC1-209ENST00000560519 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
HERC1-209ENST00000560519 TNS2Q63HR2 1409 aa13.85□□□□□ -0.19
HERC1-209ENST00000560519 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
HERC1-209ENST00000560519 PLSCR1O15162 318 aa13.85□□□□□ -0.19
HERC1-209ENST00000560519 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
HERC1-209ENST00000560519 TTC21AQ8NDW8 1320 aa13.85□□□□□ -0.19
HERC1-209ENST00000560519 KCNQ2O43526 872 aa13.83□□□□□ -0.2
HERC1-209ENST00000560519 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
HERC1-209ENST00000560519 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
HERC1-209ENST00000560519 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
HERC1-209ENST00000560519 CCDC7Q96M83 1385 aa13.83□□□□□ -0.2
HERC1-209ENST00000560519 YY1P25490 414 aa13.82□□□□□ -0.2
HERC1-209ENST00000560519 BCL11BQ9C0K0 894 aaPredicted RBP13.82□□□□□ -0.2
HERC1-209ENST00000560519 QSER1Q2KHR3 1735 aa13.81□□□□□ -0.2
HERC1-209ENST00000560519 PAPPAQ13219 1627 aa13.81□□□□□ -0.2
HERC1-209ENST00000560519 BTAF1O14981 1849 aa13.8□□□□□ -0.2
HERC1-209ENST00000560519 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
HERC1-209ENST00000560519 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
HERC1-209ENST00000560519 CARD10Q9BWT7 1032 aa13.79□□□□□ -0.2
HERC1-209ENST00000560519 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
HERC1-209ENST00000560519 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
HERC1-209ENST00000560519 ARHGEF25Q86VW2 580 aa13.78□□□□□ -0.2
HERC1-209ENST00000560519 CHD4Q14839 1912 aa13.77□□□□□ -0.21
HERC1-209ENST00000560519 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
HERC1-209ENST00000560519 STK32BQ9NY57 414 aa13.76□□□□□ -0.21
HERC1-209ENST00000560519 AXIN2Q9Y2T1 843 aa13.76□□□□□ -0.21
HERC1-209ENST00000560519 EXOC5O00471 708 aa13.75□□□□□ -0.21
HERC1-209ENST00000560519 MARCH10Q8NA82 808 aaPredicted RBP13.75□□□□□ -0.21
HERC1-209ENST00000560519 L3MBTL2Q969R5 705 aa13.75□□□□□ -0.21
HERC1-209ENST00000560519 DOT1LQ8TEK3 1739 aa13.75□□□□□ -0.21
HERC1-209ENST00000560519 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
HERC1-209ENST00000560519 ERBB3P21860 1342 aa13.74□□□□□ -0.21
HERC1-209ENST00000560519 SOX12O15370 315 aa13.74□□□□□ -0.21
HERC1-209ENST00000560519 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
HERC1-209ENST00000560519 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
HERC1-209ENST00000560519 COL24A1Q17RW2 1714 aa13.73□□□□□ -0.21
HERC1-209ENST00000560519 LY75O60449 1722 aa13.72□□□□□ -0.21
HERC1-209ENST00000560519 CD163L1Q9NR16 1453 aa13.72□□□□□ -0.21
HERC1-209ENST00000560519 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.21
HERC1-209ENST00000560519 SLC15A2Q16348 729 aa13.71□□□□□ -0.21
HERC1-209ENST00000560519 MTFR1LQ9H019 292 aa13.71□□□□□ -0.21
HERC1-209ENST00000560519 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
HERC1-209ENST00000560519 ZBTB7AO95365 584 aa13.7□□□□□ -0.22
HERC1-209ENST00000560519 IL2RBP14784 551 aa13.69□□□□□ -0.22
HERC1-209ENST00000560519 PTF1AQ7RTS3 328 aa13.69□□□□□ -0.22
HERC1-209ENST00000560519 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
HERC1-209ENST00000560519 MAP3K5Q99683 1374 aa13.69□□□□□ -0.22
HERC1-209ENST00000560519 PTGER2P43116 358 aa13.68□□□□□ -0.22
HERC1-209ENST00000560519 PROM2Q8N271 834 aa13.68□□□□□ -0.22
HERC1-209ENST00000560519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
HERC1-209ENST00000560519 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
HERC1-209ENST00000560519 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
HERC1-209ENST00000560519 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
HERC1-209ENST00000560519 FHDC1Q9C0D6 1143 aaPredicted RBP13.66□□□□□ -0.22
HERC1-209ENST00000560519 PDGFDQ9GZP0 370 aaPredicted RBP13.66□□□□□ -0.22
HERC1-209ENST00000560519 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
HERC1-209ENST00000560519 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
HERC1-209ENST00000560519 ANKRD24Q8TF21 1146 aa13.65□□□□□ -0.22
HERC1-209ENST00000560519 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
HERC1-209ENST00000560519 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
HERC1-209ENST00000560519 C5P01031 1676 aa13.65□□□□□ -0.22
HERC1-209ENST00000560519 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
HERC1-209ENST00000560519 NME9Q86XW9 330 aa13.64□□□□□ -0.23
HERC1-209ENST00000560519 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
HERC1-209ENST00000560519 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
HERC1-209ENST00000560519 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
HERC1-209ENST00000560519 SYT17Q9BSW7 474 aa13.64□□□□□ -0.23
HERC1-209ENST00000560519 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
HERC1-209ENST00000560519 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
HERC1-209ENST00000560519 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
HERC1-209ENST00000560519 ARXQ96QS3 562 aa13.63□□□□□ -0.23
HERC1-209ENST00000560519 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
HERC1-209ENST00000560519 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
HERC1-209ENST00000560519 SMG6Q86US8 1419 aaKnown RBP13.62□□□□□ -0.23
HERC1-209ENST00000560519 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
HERC1-209ENST00000560519 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
HERC1-209ENST00000560519 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
HERC1-209ENST00000560519 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
HERC1-209ENST00000560519 POLD1P28340 1107 aa13.6□□□□□ -0.23
HERC1-209ENST00000560519 ZNF784Q8NCA9 323 aaPredicted RBP13.6□□□□□ -0.23
HERC1-209ENST00000560519 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
HERC1-209ENST00000560519 UTRNP46939 3433 aa13.59□□□□□ -0.23
HERC1-209ENST00000560519 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
HERC1-209ENST00000560519 IP6K1Q92551 441 aa13.59□□□□□ -0.23
HERC1-209ENST00000560519 COG3Q96JB2 828 aa13.58□□□□□ -0.24
HERC1-209ENST00000560519 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
HERC1-209ENST00000560519 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.24
HERC1-209ENST00000560519 MEGF6O75095 1541 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms