RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 H3BM21 787 aa9.58□□□□□ -0.88
USP8-210ENST00000560379 ZFP42Q96MM3 310 aa9.58□□□□□ -0.88
USP8-210ENST00000560379 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
USP8-210ENST00000560379 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
USP8-210ENST00000560379 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
USP8-210ENST00000560379 NNTQ13423 1086 aa9.56□□□□□ -0.88
USP8-210ENST00000560379 MTMR2Q13614 643 aa9.56□□□□□ -0.88
USP8-210ENST00000560379 DESI1Q6ICB0 168 aa9.56□□□□□ -0.88
USP8-210ENST00000560379 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
USP8-210ENST00000560379 PROCA1Q8NCQ7 364 aaPredicted RBP9.56□□□□□ -0.88
USP8-210ENST00000560379 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
USP8-210ENST00000560379 TIMP2P16035 220 aa9.55□□□□□ -0.88
USP8-210ENST00000560379 MPNDQ8N594 471 aa9.55□□□□□ -0.88
USP8-210ENST00000560379 NPAS3Q8IXF0 933 aa9.54□□□□□ -0.88
USP8-210ENST00000560379 SLC16A10Q8TF71 515 aa9.54□□□□□ -0.88
USP8-210ENST00000560379 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
USP8-210ENST00000560379 PCDHB15Q9Y5E8 787 aa9.54□□□□□ -0.88
USP8-210ENST00000560379 URB2Q14146 1524 aaKnown RBP9.54□□□□□ -0.88
USP8-210ENST00000560379 SPDYE5A6NIY4 337 aa9.53□□□□□ -0.88
USP8-210ENST00000560379 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
USP8-210ENST00000560379 VARSP26640 1264 aaKnown RBP9.53□□□□□ -0.88
USP8-210ENST00000560379 RGS22Q8NE09 1264 aa9.53□□□□□ -0.88
USP8-210ENST00000560379 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
USP8-210ENST00000560379 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
USP8-210ENST00000560379 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
USP8-210ENST00000560379 TMCO4Q5TGY1 634 aa9.52□□□□□ -0.89
USP8-210ENST00000560379 RSBN1LQ6PCB5 846 aaPredicted RBP9.52□□□□□ -0.89
USP8-210ENST00000560379 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
USP8-210ENST00000560379 TBC1D2Q9BYX2 928 aa9.52□□□□□ -0.89
USP8-210ENST00000560379 MAP10Q9P2G4 905 aa9.52□□□□□ -0.89
USP8-210ENST00000560379 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
USP8-210ENST00000560379 F12P00748 615 aaPredicted RBP9.51□□□□□ -0.89
USP8-210ENST00000560379 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
USP8-210ENST00000560379 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
USP8-210ENST00000560379 IRF7Q92985 503 aa9.51□□□□□ -0.89
USP8-210ENST00000560379 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
USP8-210ENST00000560379 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
USP8-210ENST00000560379 IRF5Q13568 498 aa9.5□□□□□ -0.89
USP8-210ENST00000560379 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
USP8-210ENST00000560379 ZSCAN1Q8NBB4 408 aa9.5□□□□□ -0.89
USP8-210ENST00000560379 PURBQ96QR8 312 aaKnown RBP9.5□□□□□ -0.89
USP8-210ENST00000560379 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
USP8-210ENST00000560379 ADH1CP00326 375 aa9.49□□□□□ -0.89
USP8-210ENST00000560379 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
USP8-210ENST00000560379 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.49□□□□□ -0.89
USP8-210ENST00000560379 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
USP8-210ENST00000560379 NR3C2P08235 984 aa9.48□□□□□ -0.89
USP8-210ENST00000560379 GJA5P36382 358 aa9.48□□□□□ -0.89
USP8-210ENST00000560379 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
USP8-210ENST00000560379 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
USP8-210ENST00000560379 SNRKQ9NRH2 765 aa9.48□□□□□ -0.89
USP8-210ENST00000560379 BIVM-ERCC5R4GMW8 1640 aa9.48□□□□□ -0.89
USP8-210ENST00000560379 SPTLC1O15269 473 aa9.47□□□□□ -0.89
USP8-210ENST00000560379 CTHP32929 405 aa9.47□□□□□ -0.89
USP8-210ENST00000560379 MFAP1P55081 439 aaKnown RBP9.47□□□□□ -0.89
USP8-210ENST00000560379 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
USP8-210ENST00000560379 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
USP8-210ENST00000560379 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
USP8-210ENST00000560379 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
USP8-210ENST00000560379 IFT140Q96RY7 1462 aa9.46□□□□□ -0.9
USP8-210ENST00000560379 CUX1P39880 1505 aa9.46□□□□□ -0.9
USP8-210ENST00000560379 VSIG8P0DPA2 414 aa9.45□□□□□ -0.9
USP8-210ENST00000560379 ITPKCQ96DU7 683 aa9.45□□□□□ -0.9
USP8-210ENST00000560379 TOP2BQ02880 1626 aa9.45□□□□□ -0.9
USP8-210ENST00000560379 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
USP8-210ENST00000560379 RFC5P40937 340 aa9.44□□□□□ -0.9
USP8-210ENST00000560379 GRM5P41594 1212 aa9.44□□□□□ -0.9
USP8-210ENST00000560379 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
USP8-210ENST00000560379 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
USP8-210ENST00000560379 POLA1P09884 1462 aaPredicted RBP9.44□□□□□ -0.9
USP8-210ENST00000560379 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
USP8-210ENST00000560379 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
USP8-210ENST00000560379 ZIC2O95409 532 aaPredicted RBP9.42□□□□□ -0.9
USP8-210ENST00000560379 SCARF1Q14162 830 aa9.42□□□□□ -0.9
USP8-210ENST00000560379 FOXD4L5Q5VV16 416 aaPredicted RBP9.42□□□□□ -0.9
USP8-210ENST00000560379 FOXD4L4Q8WXT5 416 aaPredicted RBP9.42□□□□□ -0.9
USP8-210ENST00000560379 ZBTB3Q9H5J0 574 aa9.42□□□□□ -0.9
USP8-210ENST00000560379 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
USP8-210ENST00000560379 FGD5Q6ZNL6 1462 aa9.41□□□□□ -0.9
USP8-210ENST00000560379 WRNQ14191 1432 aaPredicted RBP eCLIP9.41□□□□□ -0.9
USP8-210ENST00000560379 RIC3Q7Z5B4 369 aa9.41□□□□□ -0.9
USP8-210ENST00000560379 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
USP8-210ENST00000560379 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
USP8-210ENST00000560379 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.9
USP8-210ENST00000560379 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
USP8-210ENST00000560379 QPCTQ16769 361 aa9.4□□□□□ -0.9
USP8-210ENST00000560379 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
USP8-210ENST00000560379 PRPF38BQ5VTL8 546 aaKnown RBP9.4□□□□□ -0.9
USP8-210ENST00000560379 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.9
USP8-210ENST00000560379 CALR3Q96L12 384 aaKnown RBP9.4□□□□□ -0.9
USP8-210ENST00000560379 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
USP8-210ENST00000560379 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.9
USP8-210ENST00000560379 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
USP8-210ENST00000560379 PDE4CQ08493 712 aa9.39□□□□□ -0.91
USP8-210ENST00000560379 CSPP1Q1MSJ5 1256 aa9.39□□□□□ -0.91
USP8-210ENST00000560379 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
USP8-210ENST00000560379 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
USP8-210ENST00000560379 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
USP8-210ENST00000560379 NR5A1Q13285 461 aa9.38□□□□□ -0.91
USP8-210ENST00000560379 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms