RNA–Protein interactions for RNA: ENST00000560350.5

USP3-AS1-206, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 407 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-206ENST00000560350 SPATA31D1Q6ZQQ2 1576 aa11.27□□□□□ -0.61
USP3-AS1-206ENST00000560350 NOS1P29475 1434 aa11.26□□□□□ -0.61
USP3-AS1-206ENST00000560350 CEP170BQ9Y4F5 1589 aaPredicted RBP11.26□□□□□ -0.61
USP3-AS1-206ENST00000560350 ZC3H13Q5T200 1668 aaKnown RBP11.26□□□□□ -0.61
USP3-AS1-206ENST00000560350 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 UGGT1Q9NYU2 1555 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 CAMSAP1Q5T5Y3 1602 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 MROH1Q8NDA8 1641 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 TRIM52Q96A61 297 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 NAIPQ13075 1403 aa11.25□□□□□ -0.61
USP3-AS1-206ENST00000560350 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
USP3-AS1-206ENST00000560350 DEPDC5O75140 1603 aa11.22□□□□□ -0.61
USP3-AS1-206ENST00000560350 HRCP23327 699 aa11.22□□□□□ -0.61
USP3-AS1-206ENST00000560350 DNAJB2P25686 324 aa11.22□□□□□ -0.61
USP3-AS1-206ENST00000560350 ZNF516Q92618 1163 aa11.22□□□□□ -0.61
USP3-AS1-206ENST00000560350 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
USP3-AS1-206ENST00000560350 MED14O60244 1454 aa11.21□□□□□ -0.61
USP3-AS1-206ENST00000560350 NPHP4O75161 1426 aaPredicted RBP11.21□□□□□ -0.61
USP3-AS1-206ENST00000560350 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
USP3-AS1-206ENST00000560350 FCHSD2O94868 740 aa11.21□□□□□ -0.61
USP3-AS1-206ENST00000560350 LTKP29376 864 aa11.21□□□□□ -0.61
USP3-AS1-206ENST00000560350 RBM46Q8TBY0 533 aaKnown RBP11.21□□□□□ -0.61
USP3-AS1-206ENST00000560350 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
USP3-AS1-206ENST00000560350 MYO3AQ8NEV4 1616 aa11.2□□□□□ -0.62
USP3-AS1-206ENST00000560350 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
USP3-AS1-206ENST00000560350 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
USP3-AS1-206ENST00000560350 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
USP3-AS1-206ENST00000560350 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
USP3-AS1-206ENST00000560350 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
USP3-AS1-206ENST00000560350 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
USP3-AS1-206ENST00000560350 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 BCANQ96GW7 911 aa11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 SLIT1O75093 1534 aa11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
USP3-AS1-206ENST00000560350 KCNA6P17658 529 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 COPS2P61201 443 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 STRCQ7RTU9 1775 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 UNC13BO14795 1591 aa11.16□□□□□ -0.62
USP3-AS1-206ENST00000560350 TOM1O60784 492 aa11.15□□□□□ -0.62
USP3-AS1-206ENST00000560350 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
USP3-AS1-206ENST00000560350 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
USP3-AS1-206ENST00000560350 RPGRIP1LQ68CZ1 1315 aa11.14□□□□□ -0.63
USP3-AS1-206ENST00000560350 HIC1Q14526 733 aa11.13□□□□□ -0.63
USP3-AS1-206ENST00000560350 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
USP3-AS1-206ENST00000560350 PXYLP1Q8TE99 480 aa11.13□□□□□ -0.63
USP3-AS1-206ENST00000560350 TET3O43151 1660 aa11.13□□□□□ -0.63
USP3-AS1-206ENST00000560350 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
USP3-AS1-206ENST00000560350 CEP152O94986 1710 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 RIMS2Q9UQ26 1411 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 ZPR1O75312 459 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 SLC26A8Q96RN1 970 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 PCDHB3Q9Y5E6 796 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 CPS1P31327 1500 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 IQGAP3Q86VI3 1631 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 LTBP4Q8N2S1 1624 aa11.12□□□□□ -0.63
USP3-AS1-206ENST00000560350 GPR37O15354 613 aa11.11□□□□□ -0.63
USP3-AS1-206ENST00000560350 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
USP3-AS1-206ENST00000560350 OATP04181 439 aa11.1□□□□□ -0.63
USP3-AS1-206ENST00000560350 BLOC1S3Q6QNY0 202 aa11.1□□□□□ -0.63
USP3-AS1-206ENST00000560350 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
USP3-AS1-206ENST00000560350 SYNMO15061 1565 aa11.1□□□□□ -0.63
USP3-AS1-206ENST00000560350 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
USP3-AS1-206ENST00000560350 KDM5AP29375 1690 aaKnown RBP11.09□□□□□ -0.63
USP3-AS1-206ENST00000560350 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
USP3-AS1-206ENST00000560350 SLC10A3P09131 477 aa11.09□□□□□ -0.63
USP3-AS1-206ENST00000560350 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
USP3-AS1-206ENST00000560350 ADGRB3O60242 1522 aa11.09□□□□□ -0.63
USP3-AS1-206ENST00000560350 NEURL4Q96JN8 1562 aa11.08□□□□□ -0.64
USP3-AS1-206ENST00000560350 ACTN4O43707 911 aaKnown RBP11.08□□□□□ -0.64
USP3-AS1-206ENST00000560350 FECHP22830 423 aa11.08□□□□□ -0.64
USP3-AS1-206ENST00000560350 METTL3Q86U44 580 aaKnown RBP11.08□□□□□ -0.64
USP3-AS1-206ENST00000560350 RAB3GAP2Q9H2M9 1393 aa11.07□□□□□ -0.64
USP3-AS1-206ENST00000560350 GNPATO15228 680 aa11.07□□□□□ -0.64
USP3-AS1-206ENST00000560350 CFHP08603 1231 aa11.07□□□□□ -0.64
USP3-AS1-206ENST00000560350 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
USP3-AS1-206ENST00000560350 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
USP3-AS1-206ENST00000560350 PIK3C2BO00750 1634 aa11.06□□□□□ -0.64
USP3-AS1-206ENST00000560350 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
USP3-AS1-206ENST00000560350 NUTM2DQ5VT03 806 aaPredicted RBP11.06□□□□□ -0.64
USP3-AS1-206ENST00000560350 GCC2Q8IWJ2 1684 aa11.05□□□□□ -0.64
USP3-AS1-206ENST00000560350 CCDC144AA2RUR9 1427 aa11.05□□□□□ -0.64
USP3-AS1-206ENST00000560350 GGCXP38435 758 aa11.05□□□□□ -0.64
USP3-AS1-206ENST00000560350 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms