RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 BLMP54132 1417 aaPredicted RBP18.31■□□□□ 0.52
HMBOX1-213ENST00000560269 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
HMBOX1-213ENST00000560269 HSP90AB2PQ58FF8 381 aa18.3■□□□□ 0.52
HMBOX1-213ENST00000560269 PNISRQ8TF01 805 aaKnown RBP18.3■□□□□ 0.52
HMBOX1-213ENST00000560269 RGPD5Q99666 1765 aa18.3■□□□□ 0.52
HMBOX1-213ENST00000560269 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
HMBOX1-213ENST00000560269 COL14A1Q05707 1796 aaKnown RBP18.29■□□□□ 0.52
HMBOX1-213ENST00000560269 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
HMBOX1-213ENST00000560269 PRDM11Q9NQV5 511 aa18.28■□□□□ 0.52
HMBOX1-213ENST00000560269 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
HMBOX1-213ENST00000560269 IL13P35225 146 aa18.27■□□□□ 0.52
HMBOX1-213ENST00000560269 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.52
HMBOX1-213ENST00000560269 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.52
HMBOX1-213ENST00000560269 CHRNA2Q15822 529 aa18.26■□□□□ 0.51
HMBOX1-213ENST00000560269 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
HMBOX1-213ENST00000560269 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
HMBOX1-213ENST00000560269 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
HMBOX1-213ENST00000560269 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
HMBOX1-213ENST00000560269 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
HMBOX1-213ENST00000560269 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
HMBOX1-213ENST00000560269 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
HMBOX1-213ENST00000560269 LRP6O75581 1613 aa18.24■□□□□ 0.51
HMBOX1-213ENST00000560269 WDR43Q15061 677 aaKnown RBP eCLIP18.24■□□□□ 0.51
HMBOX1-213ENST00000560269 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
HMBOX1-213ENST00000560269 ADAMTS2O95450 1211 aa18.22■□□□□ 0.51
HMBOX1-213ENST00000560269 FAM9BQ8IZU0 186 aa18.22■□□□□ 0.51
HMBOX1-213ENST00000560269 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
HMBOX1-213ENST00000560269 ERBB3P21860 1342 aa18.22■□□□□ 0.51
HMBOX1-213ENST00000560269 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.51
HMBOX1-213ENST00000560269 NWD2Q9ULI1 1742 aa18.21■□□□□ 0.51
HMBOX1-213ENST00000560269 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
HMBOX1-213ENST00000560269 RGPD2P0DJD1 1756 aa18.21■□□□□ 0.51
HMBOX1-213ENST00000560269 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
HMBOX1-213ENST00000560269 LTV1Q96GA3 475 aaPredicted RBP18.2■□□□□ 0.5
HMBOX1-213ENST00000560269 EYA1Q99502 592 aa18.2■□□□□ 0.5
HMBOX1-213ENST00000560269 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
HMBOX1-213ENST00000560269 IGSF1Q8N6C5 1336 aa18.2■□□□□ 0.5
HMBOX1-213ENST00000560269 SLIT2O94813 1529 aa18.19■□□□□ 0.5
HMBOX1-213ENST00000560269 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
HMBOX1-213ENST00000560269 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMBOX1-213ENST00000560269 NCAPD2Q15021 1401 aa18.19■□□□□ 0.5
HMBOX1-213ENST00000560269 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
HMBOX1-213ENST00000560269 WDR17Q8IZU2 1322 aa18.18■□□□□ 0.5
HMBOX1-213ENST00000560269 NBPF6Q5VWK0 638 aa18.17■□□□□ 0.5
HMBOX1-213ENST00000560269 NBPF4Q96M43 638 aa18.17■□□□□ 0.5
HMBOX1-213ENST00000560269 KDRP35968 1356 aa18.17■□□□□ 0.5
HMBOX1-213ENST00000560269 FCHSD2O94868 740 aa18.16■□□□□ 0.5
HMBOX1-213ENST00000560269 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
HMBOX1-213ENST00000560269 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.49
HMBOX1-213ENST00000560269 EVA1CP58658 441 aa18.14■□□□□ 0.49
HMBOX1-213ENST00000560269 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
HMBOX1-213ENST00000560269 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
HMBOX1-213ENST00000560269 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
HMBOX1-213ENST00000560269 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
HMBOX1-213ENST00000560269 HMOX1P09601 288 aa18.13■□□□□ 0.49
HMBOX1-213ENST00000560269 AEBP1Q8IUX7 1158 aa18.13■□□□□ 0.49
HMBOX1-213ENST00000560269 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
HMBOX1-213ENST00000560269 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
HMBOX1-213ENST00000560269 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
HMBOX1-213ENST00000560269 CRB1P82279 1406 aa18.13■□□□□ 0.49
HMBOX1-213ENST00000560269 MEX3CQ5U5Q3 659 aaKnown RBP18.12■□□□□ 0.49
HMBOX1-213ENST00000560269 STRN4Q9NRL3 753 aa18.12■□□□□ 0.49
HMBOX1-213ENST00000560269 NLRP2Q9NX02 1062 aa18.12■□□□□ 0.49
HMBOX1-213ENST00000560269 BCL9LQ86UU0 1499 aa18.12■□□□□ 0.49
HMBOX1-213ENST00000560269 LARP1Q6PKG0 1096 aaKnown RBP18.11■□□□□ 0.49
HMBOX1-213ENST00000560269 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
HMBOX1-213ENST00000560269 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
HMBOX1-213ENST00000560269 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
HMBOX1-213ENST00000560269 CARD10Q9BWT7 1032 aa18.11■□□□□ 0.49
HMBOX1-213ENST00000560269 PRKAR2BP31323 418 aa18.1■□□□□ 0.49
HMBOX1-213ENST00000560269 UNC5CLQ8IV45 518 aa18.1■□□□□ 0.49
HMBOX1-213ENST00000560269 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
HMBOX1-213ENST00000560269 PLEKHG2Q9H7P9 1386 aa18.09■□□□□ 0.49
HMBOX1-213ENST00000560269 WNK3Q9BYP7 1800 aa18.07■□□□□ 0.48
HMBOX1-213ENST00000560269 AFF2P51816 1311 aa18.07■□□□□ 0.48
HMBOX1-213ENST00000560269 PARP4Q9UKK3 1724 aaKnown RBP18.06■□□□□ 0.48
HMBOX1-213ENST00000560269 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
HMBOX1-213ENST00000560269 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
HMBOX1-213ENST00000560269 USP21Q9UK80 565 aa18.06■□□□□ 0.48
HMBOX1-213ENST00000560269 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
HMBOX1-213ENST00000560269 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
HMBOX1-213ENST00000560269 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
HMBOX1-213ENST00000560269 NEFMP07197 916 aa18.05■□□□□ 0.48
HMBOX1-213ENST00000560269 VPS72Q15906 364 aa18.05■□□□□ 0.48
HMBOX1-213ENST00000560269 MEGF6O75095 1541 aa18.04■□□□□ 0.48
HMBOX1-213ENST00000560269 APAF1O14727 1248 aa18.04■□□□□ 0.48
HMBOX1-213ENST00000560269 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
HMBOX1-213ENST00000560269 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
HMBOX1-213ENST00000560269 PKD1L3Q7Z443 1732 aa18.03■□□□□ 0.48
HMBOX1-213ENST00000560269 HNRNPUQ00839 825 aaKnown RBP eCLIP18.03■□□□□ 0.48
HMBOX1-213ENST00000560269 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
HMBOX1-213ENST00000560269 RAPGEF4Q8WZA2 1011 aa18.03■□□□□ 0.48
HMBOX1-213ENST00000560269 DISP2A7MBM2 1401 aa18.03■□□□□ 0.48
HMBOX1-213ENST00000560269 ATRNO75882 1429 aa18.03■□□□□ 0.48
HMBOX1-213ENST00000560269 OVOS2A0A0G2JMS6 1433 aa18.02■□□□□ 0.48
HMBOX1-213ENST00000560269 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
HMBOX1-213ENST00000560269 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
HMBOX1-213ENST00000560269 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.47
HMBOX1-213ENST00000560269 IL2RBP14784 551 aa18.01■□□□□ 0.47
HMBOX1-213ENST00000560269 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms