RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 AMPHP49418 695 aa22.28■■□□□ 1.16
LRRC28-217ENST00000560213 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
LRRC28-217ENST00000560213 RRS1Q15050 365 aaKnown RBP22.28■■□□□ 1.16
LRRC28-217ENST00000560213 VPS72Q15906 364 aa22.28■■□□□ 1.16
LRRC28-217ENST00000560213 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
LRRC28-217ENST00000560213 ATRNO75882 1429 aa22.28■■□□□ 1.16
LRRC28-217ENST00000560213 NRAPQ86VF7 1730 aa22.28■■□□□ 1.16
LRRC28-217ENST00000560213 MAP3K19Q56UN5 1328 aa22.28■■□□□ 1.16
LRRC28-217ENST00000560213 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
LRRC28-217ENST00000560213 RBM6P78332 1123 aaKnown RBP22.27■■□□□ 1.16
LRRC28-217ENST00000560213 CC2D1BQ5T0F9 858 aaKnown RBP22.27■■□□□ 1.16
LRRC28-217ENST00000560213 RGPD5Q99666 1765 aa22.26■■□□□ 1.15
LRRC28-217ENST00000560213 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
LRRC28-217ENST00000560213 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
LRRC28-217ENST00000560213 IP6K1Q92551 441 aa22.25■■□□□ 1.15
LRRC28-217ENST00000560213 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
LRRC28-217ENST00000560213 NPC1L1Q9UHC9 1359 aa22.24■■□□□ 1.15
LRRC28-217ENST00000560213 COL5A2P05997 1499 aaPredicted RBP22.23■■□□□ 1.15
LRRC28-217ENST00000560213 ABCC6O95255 1503 aa22.23■■□□□ 1.15
LRRC28-217ENST00000560213 CSB-PGBD3P0DP91 1061 aa22.23■■□□□ 1.15
LRRC28-217ENST00000560213 PPM1GO15355 546 aaPredicted RBP22.22■■□□□ 1.15
LRRC28-217ENST00000560213 HOXC9P31274 260 aa22.22■■□□□ 1.15
LRRC28-217ENST00000560213 LARP1Q6PKG0 1096 aaKnown RBP22.22■■□□□ 1.15
LRRC28-217ENST00000560213 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
LRRC28-217ENST00000560213 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
LRRC28-217ENST00000560213 POLKQ9UBT6 870 aa22.2■■□□□ 1.14
LRRC28-217ENST00000560213 SPATA31A5Q5VU36 1347 aa22.2■■□□□ 1.14
LRRC28-217ENST00000560213 SPATA31A7Q8IWB4 1347 aa22.2■■□□□ 1.14
LRRC28-217ENST00000560213 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
LRRC28-217ENST00000560213 BLMP54132 1417 aaPredicted RBP22.2■■□□□ 1.14
LRRC28-217ENST00000560213 ANKRD24Q8TF21 1146 aa22.19■■□□□ 1.14
LRRC28-217ENST00000560213 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
LRRC28-217ENST00000560213 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
LRRC28-217ENST00000560213 WDR17Q8IZU2 1322 aa22.19■■□□□ 1.14
LRRC28-217ENST00000560213 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
LRRC28-217ENST00000560213 FLT4P35916 1363 aa22.18■■□□□ 1.14
LRRC28-217ENST00000560213 SPATA31A1Q5TZJ5 1347 aa22.18■■□□□ 1.14
LRRC28-217ENST00000560213 GLI3P10071 1580 aa22.17■■□□□ 1.14
LRRC28-217ENST00000560213 CRB1P82279 1406 aa22.17■■□□□ 1.14
LRRC28-217ENST00000560213 ERBB3P21860 1342 aa22.17■■□□□ 1.14
LRRC28-217ENST00000560213 ILDR2Q71H61 639 aa22.17■■□□□ 1.14
LRRC28-217ENST00000560213 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
LRRC28-217ENST00000560213 PEAK1Q9H792 1746 aa22.15■■□□□ 1.14
LRRC28-217ENST00000560213 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
LRRC28-217ENST00000560213 NLRP2Q9NX02 1062 aa22.15■■□□□ 1.14
LRRC28-217ENST00000560213 FAM98CQ17RN3 349 aaKnown RBP22.14■■□□□ 1.13
LRRC28-217ENST00000560213 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.13
LRRC28-217ENST00000560213 INSRP06213 1382 aa22.13■■□□□ 1.13
LRRC28-217ENST00000560213 A0A0G2JS52 829 aa22.13■■□□□ 1.13
LRRC28-217ENST00000560213 MYT1Q01538 1121 aa22.13■■□□□ 1.13
LRRC28-217ENST00000560213 THRAP3Q9Y2W1 955 aaKnown RBP22.13■■□□□ 1.13
LRRC28-217ENST00000560213 CDK12Q9NYV4 1490 aaPredicted RBP22.13■■□□□ 1.13
LRRC28-217ENST00000560213 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
LRRC28-217ENST00000560213 SMG6Q86US8 1419 aaKnown RBP22.12■■□□□ 1.13
LRRC28-217ENST00000560213 MTHFSP49914 203 aa22.11■■□□□ 1.13
LRRC28-217ENST00000560213 BARGINQ6ZT62 677 aa22.11■■□□□ 1.13
LRRC28-217ENST00000560213 SEPT12Q8IYM1 358 aa22.1■■□□□ 1.13
LRRC28-217ENST00000560213 RGS12O14924 1447 aa22.09■■□□□ 1.13
LRRC28-217ENST00000560213 FAM208AQ9UK61 1670 aaKnown RBP22.08■■□□□ 1.13
LRRC28-217ENST00000560213 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
LRRC28-217ENST00000560213 NBPF6Q5VWK0 638 aa22.06■■□□□ 1.12
LRRC28-217ENST00000560213 NBPF4Q96M43 638 aa22.06■■□□□ 1.12
LRRC28-217ENST00000560213 PPP2R1AP30153 589 aa22.05■■□□□ 1.12
LRRC28-217ENST00000560213 RALBP1Q15311 655 aa22.05■■□□□ 1.12
LRRC28-217ENST00000560213 CDCA7Q9BWT1 371 aaPredicted RBP22.05■■□□□ 1.12
LRRC28-217ENST00000560213 PARD3Q8TEW0 1356 aa22.04■■□□□ 1.12
LRRC28-217ENST00000560213 EIF4A2Q14240 407 aaKnown RBP22.04■■□□□ 1.12
LRRC28-217ENST00000560213 THSD7AQ9UPZ6 1657 aa22.02■■□□□ 1.12
LRRC28-217ENST00000560213 IL2RBP14784 551 aa22.02■■□□□ 1.12
LRRC28-217ENST00000560213 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
LRRC28-217ENST00000560213 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
LRRC28-217ENST00000560213 CFAP53Q96M91 514 aa22.01■■□□□ 1.11
LRRC28-217ENST00000560213 EYA1Q99502 592 aa22.01■■□□□ 1.11
LRRC28-217ENST00000560213 PDE3BQ13370 1112 aa22■■□□□ 1.11
LRRC28-217ENST00000560213 KRT27Q7Z3Y8 459 aa22■■□□□ 1.11
LRRC28-217ENST00000560213 WNK3Q9BYP7 1800 aa21.99■■□□□ 1.11
LRRC28-217ENST00000560213 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
LRRC28-217ENST00000560213 DDB1Q16531 1140 aa21.99■■□□□ 1.11
LRRC28-217ENST00000560213 EXOC5O00471 708 aa21.98■■□□□ 1.11
LRRC28-217ENST00000560213 IL13P35225 146 aa21.98■■□□□ 1.11
LRRC28-217ENST00000560213 DISP2A7MBM2 1401 aa21.97■■□□□ 1.11
LRRC28-217ENST00000560213 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
LRRC28-217ENST00000560213 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
LRRC28-217ENST00000560213 PRKRIP1Q9H875 184 aaPredicted RBP21.96■■□□□ 1.11
LRRC28-217ENST00000560213 TATP17735 454 aaPredicted RBP21.95■■□□□ 1.1
LRRC28-217ENST00000560213 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
LRRC28-217ENST00000560213 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
LRRC28-217ENST00000560213 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
LRRC28-217ENST00000560213 NCAPD2Q15021 1401 aa21.92■■□□□ 1.1
LRRC28-217ENST00000560213 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
LRRC28-217ENST00000560213 U2SURPO15042 1029 aaKnown RBP21.91■■□□□ 1.1
LRRC28-217ENST00000560213 ANP32CO43423 234 aa21.91■■□□□ 1.1
LRRC28-217ENST00000560213 FAM182BQ5T319 152 aa21.91■■□□□ 1.1
LRRC28-217ENST00000560213 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
LRRC28-217ENST00000560213 NUDCQ9Y266 331 aa21.91■■□□□ 1.1
LRRC28-217ENST00000560213 MEGF6O75095 1541 aa21.9■■□□□ 1.1
LRRC28-217ENST00000560213 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
LRRC28-217ENST00000560213 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.09
LRRC28-217ENST00000560213 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.09
LRRC28-217ENST00000560213 TNS2Q63HR2 1409 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms