RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 USP47Q96K76 1375 aa22.84■■□□□ 1.25
CERNA1-201ENST00000559779 COL18A1P39060 1754 aa22.84■■□□□ 1.25
CERNA1-201ENST00000559779 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.25
CERNA1-201ENST00000559779 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.25
CERNA1-201ENST00000559779 EDC4Q6P2E9 1401 aaKnown RBP22.82■■□□□ 1.24
CERNA1-201ENST00000559779 USP31Q70CQ4 1352 aa22.82■■□□□ 1.24
CERNA1-201ENST00000559779 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
CERNA1-201ENST00000559779 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
CERNA1-201ENST00000559779 TRIM37O94972 964 aa22.81■■□□□ 1.24
CERNA1-201ENST00000559779 TMF1P82094 1093 aa22.81■■□□□ 1.24
CERNA1-201ENST00000559779 NFAT5O94916 1531 aa22.81■■□□□ 1.24
CERNA1-201ENST00000559779 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
CERNA1-201ENST00000559779 EN1Q05925 392 aaPredicted RBP22.8■■□□□ 1.24
CERNA1-201ENST00000559779 RGPD5Q99666 1765 aa22.79■■□□□ 1.24
CERNA1-201ENST00000559779 PARP4Q9UKK3 1724 aaKnown RBP22.77■■□□□ 1.24
CERNA1-201ENST00000559779 DDB1Q16531 1140 aa22.76■■□□□ 1.23
CERNA1-201ENST00000559779 CCER1Q8TC90 406 aaPredicted RBP22.76■■□□□ 1.23
CERNA1-201ENST00000559779 USP54Q70EL1 1684 aa22.76■■□□□ 1.23
CERNA1-201ENST00000559779 TNS1Q9HBL0 1735 aaKnown RBP22.75■■□□□ 1.23
CERNA1-201ENST00000559779 APBA3O96018 575 aa22.74■■□□□ 1.23
CERNA1-201ENST00000559779 CARD10Q9BWT7 1032 aa22.74■■□□□ 1.23
CERNA1-201ENST00000559779 CDCA8Q53HL2 280 aa22.73■■□□□ 1.23
CERNA1-201ENST00000559779 LTN1O94822 1766 aa22.73■■□□□ 1.23
CERNA1-201ENST00000559779 ABCC6O95255 1503 aa22.72■■□□□ 1.23
CERNA1-201ENST00000559779 EZH2Q15910 746 aaKnown RBP22.72■■□□□ 1.23
CERNA1-201ENST00000559779 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
CERNA1-201ENST00000559779 ANKRD36BQ8N2N9 1353 aa22.72■■□□□ 1.23
CERNA1-201ENST00000559779 OVOS2A0A0J9YW53 1432 aa22.72■■□□□ 1.23
CERNA1-201ENST00000559779 OVOS2Q6IE36 1432 aa22.72■■□□□ 1.23
CERNA1-201ENST00000559779 LRRC37A3O60309 1634 aa22.71■■□□□ 1.23
CERNA1-201ENST00000559779 COG3Q96JB2 828 aa22.71■■□□□ 1.23
CERNA1-201ENST00000559779 DISP2A7MBM2 1401 aa22.71■■□□□ 1.23
CERNA1-201ENST00000559779 NLRP2Q9NX02 1062 aa22.7■■□□□ 1.22
CERNA1-201ENST00000559779 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.22
CERNA1-201ENST00000559779 OVOS2A0A0G2JMS6 1433 aa22.69■■□□□ 1.22
CERNA1-201ENST00000559779 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
CERNA1-201ENST00000559779 PSDA5PKW4 1024 aaPredicted RBP22.69■■□□□ 1.22
CERNA1-201ENST00000559779 C11orf95C9JLR9 678 aaPredicted RBP22.69■■□□□ 1.22
CERNA1-201ENST00000559779 ERBB3P21860 1342 aa22.68■■□□□ 1.22
CERNA1-201ENST00000559779 CAMKK2Q96RR4 588 aa22.68■■□□□ 1.22
CERNA1-201ENST00000559779 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
CERNA1-201ENST00000559779 EXOC5O00471 708 aa22.66■■□□□ 1.22
CERNA1-201ENST00000559779 MARCH10Q8NA82 808 aaPredicted RBP22.64■■□□□ 1.21
CERNA1-201ENST00000559779 LTV1Q96GA3 475 aaPredicted RBP22.64■■□□□ 1.21
CERNA1-201ENST00000559779 PEAK1Q9H792 1746 aa22.64■■□□□ 1.21
CERNA1-201ENST00000559779 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
CERNA1-201ENST00000559779 R3HDM1Q15032 1099 aaKnown RBP22.63■■□□□ 1.21
CERNA1-201ENST00000559779 IP6K1Q92551 441 aa22.63■■□□□ 1.21
CERNA1-201ENST00000559779 GGNBP2Q9H3C7 697 aa22.63■■□□□ 1.21
CERNA1-201ENST00000559779 FYB1O15117 783 aa22.62■■□□□ 1.21
CERNA1-201ENST00000559779 FBLN1P23142 703 aa22.62■■□□□ 1.21
CERNA1-201ENST00000559779 AMPHP49418 695 aa22.62■■□□□ 1.21
CERNA1-201ENST00000559779 MAP3K19Q56UN5 1328 aa22.61■■□□□ 1.21
CERNA1-201ENST00000559779 POLR3GLQ9BT43 218 aa22.61■■□□□ 1.21
CERNA1-201ENST00000559779 IL2RBP14784 551 aa22.6■■□□□ 1.21
CERNA1-201ENST00000559779 SBF2Q86WG5 1849 aa22.59■■□□□ 1.21
CERNA1-201ENST00000559779 HOXC9P31274 260 aa22.58■■□□□ 1.21
CERNA1-201ENST00000559779 BCL11BQ9C0K0 894 aaPredicted RBP22.58■■□□□ 1.21
CERNA1-201ENST00000559779 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
CERNA1-201ENST00000559779 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
CERNA1-201ENST00000559779 RRS1Q15050 365 aaKnown RBP22.57■■□□□ 1.2
CERNA1-201ENST00000559779 NBPF14Q5TI25 921 aa22.57■■□□□ 1.2
CERNA1-201ENST00000559779 PTF1AQ7RTS3 328 aa22.57■■□□□ 1.2
CERNA1-201ENST00000559779 MYOM1P52179 1685 aa22.57■■□□□ 1.2
CERNA1-201ENST00000559779 RREB1Q92766 1687 aa22.56■■□□□ 1.2
CERNA1-201ENST00000559779 CARD14Q9BXL6 1004 aa22.56■■□□□ 1.2
CERNA1-201ENST00000559779 KIF20BQ96Q89 1820 aa22.56■■□□□ 1.2
CERNA1-201ENST00000559779 BCL9O00512 1426 aa22.55■■□□□ 1.2
CERNA1-201ENST00000559779 NSD3Q9BZ95 1437 aa22.55■■□□□ 1.2
CERNA1-201ENST00000559779 FAM208AQ9UK61 1670 aaKnown RBP22.54■■□□□ 1.2
CERNA1-201ENST00000559779 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
CERNA1-201ENST00000559779 PLSCR1O15162 318 aa22.53■■□□□ 1.2
CERNA1-201ENST00000559779 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
CERNA1-201ENST00000559779 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
CERNA1-201ENST00000559779 ACSBG1Q96GR2 724 aa22.51■■□□□ 1.19
CERNA1-201ENST00000559779 SRCAPQ6ZRS2 3230 aa22.51■■□□□ 1.19
CERNA1-201ENST00000559779 LRP5O75197 1615 aa22.5■■□□□ 1.19
CERNA1-201ENST00000559779 KCNQ2O43526 872 aa22.5■■□□□ 1.19
CERNA1-201ENST00000559779 DDX54Q8TDD1 881 aaKnown RBP22.49■■□□□ 1.19
CERNA1-201ENST00000559779 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
CERNA1-201ENST00000559779 RGPD3A6NKT7 1758 aaPredicted RBP22.48■■□□□ 1.19
CERNA1-201ENST00000559779 RGPD4Q7Z3J3 1758 aa22.48■■□□□ 1.19
CERNA1-201ENST00000559779 RGPD2P0DJD1 1756 aa22.48■■□□□ 1.19
CERNA1-201ENST00000559779 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
CERNA1-201ENST00000559779 HSP90AB2PQ58FF8 381 aa22.46■■□□□ 1.19
CERNA1-201ENST00000559779 PPM1GO15355 546 aaPredicted RBP22.45■■□□□ 1.18
CERNA1-201ENST00000559779 NBPF6Q5VWK0 638 aa22.45■■□□□ 1.18
CERNA1-201ENST00000559779 USHBP1Q8N6Y0 703 aa22.45■■□□□ 1.18
CERNA1-201ENST00000559779 NBPF4Q96M43 638 aa22.45■■□□□ 1.18
CERNA1-201ENST00000559779 FLT4P35916 1363 aa22.45■■□□□ 1.18
CERNA1-201ENST00000559779 NHSQ6T4R5 1651 aa22.45■■□□□ 1.18
CERNA1-201ENST00000559779 TXNRD1Q16881 649 aa22.44■■□□□ 1.18
CERNA1-201ENST00000559779 PROM2Q8N271 834 aa22.44■■□□□ 1.18
CERNA1-201ENST00000559779 INSRP06213 1382 aa22.43■■□□□ 1.18
CERNA1-201ENST00000559779 EMILIN1Q9Y6C2 1016 aa22.43■■□□□ 1.18
CERNA1-201ENST00000559779 KIF24Q5T7B8 1368 aa22.42■■□□□ 1.18
CERNA1-201ENST00000559779 ZCRB1Q8TBF4 217 aaKnown RBP22.42■■□□□ 1.18
CERNA1-201ENST00000559779 RAPGEF4Q8WZA2 1011 aa22.41■■□□□ 1.18
CERNA1-201ENST00000559779 KAT6BQ8WYB5 2073 aa22.41■■□□□ 1.18
CERNA1-201ENST00000559779 MEGF6O75095 1541 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms