RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SCARF2Q96GP6 870 aaPredicted RBP7.62□□□□□ -1.19
CASC4-210ENST00000559550 TSEN34Q9BSV6 310 aaKnown RBP7.62□□□□□ -1.19
CASC4-210ENST00000559550 MARSP56192 900 aaKnown RBP7.61□□□□□ -1.19
CASC4-210ENST00000559550 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
CASC4-210ENST00000559550 BEGAINQ9BUH8 593 aa7.61□□□□□ -1.19
CASC4-210ENST00000559550 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 CTHP32929 405 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 PLA2G4EQ3MJ16 856 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 LYPD4Q6UWN0 246 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 FAM117AQ9C073 453 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 MAP10Q9P2G4 905 aa7.6□□□□□ -1.19
CASC4-210ENST00000559550 FIGNL2A6NMB9 653 aa7.59□□□□□ -1.19
CASC4-210ENST00000559550 ITGA6P23229 1130 aa7.58□□□□□ -1.2
CASC4-210ENST00000559550 VWA5B2Q8N398 1253 aa7.58□□□□□ -1.2
CASC4-210ENST00000559550 SPOCK3Q9BQ16 436 aa7.58□□□□□ -1.2
CASC4-210ENST00000559550 CFAP99D6REC4 459 aa7.57□□□□□ -1.2
CASC4-210ENST00000559550 MSTNO14793 375 aa7.57□□□□□ -1.2
CASC4-210ENST00000559550 FSHRP23945 695 aa7.57□□□□□ -1.2
CASC4-210ENST00000559550 SH3RF1Q7Z6J0 888 aa7.57□□□□□ -1.2
CASC4-210ENST00000559550 MAP4K5Q9Y4K4 846 aa7.57□□□□□ -1.2
CASC4-210ENST00000559550 SPINT1O43278 529 aa7.56□□□□□ -1.2
CASC4-210ENST00000559550 ADAMTS2O95450 1211 aa7.56□□□□□ -1.2
CASC4-210ENST00000559550 PROCP04070 461 aa7.56□□□□□ -1.2
CASC4-210ENST00000559550 SV2AQ7L0J3 742 aa7.56□□□□□ -1.2
CASC4-210ENST00000559550 BPHLQ86WA6 291 aaPredicted RBP7.56□□□□□ -1.2
CASC4-210ENST00000559550 Q6ZVU0 165 aa7.55□□□□□ -1.2
CASC4-210ENST00000559550 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
CASC4-210ENST00000559550 TBC1D2Q9BYX2 928 aa7.55□□□□□ -1.2
CASC4-210ENST00000559550 EMILIN1Q9Y6C2 1016 aa7.55□□□□□ -1.2
CASC4-210ENST00000559550 CELA2BP08218 269 aaPredicted RBP7.54□□□□□ -1.2
CASC4-210ENST00000559550 TRMT44Q8IYL2 757 aaKnown RBP7.54□□□□□ -1.2
CASC4-210ENST00000559550 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
CASC4-210ENST00000559550 SENP3-EIF4A1A0A087X0R7 540 aa7.53□□□□□ -1.2
CASC4-210ENST00000559550 CDC14CA4D256 554 aa7.53□□□□□ -1.2
CASC4-210ENST00000559550 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
CASC4-210ENST00000559550 CBLBQ13191 982 aa7.53□□□□□ -1.2
CASC4-210ENST00000559550 AGERQ15109 404 aa7.53□□□□□ -1.2
CASC4-210ENST00000559550 CCDC116Q8IYX3 515 aa7.53□□□□□ -1.2
CASC4-210ENST00000559550 GJA5P36382 358 aa7.52□□□□□ -1.21
CASC4-210ENST00000559550 GAS6Q14393 721 aa7.52□□□□□ -1.21
CASC4-210ENST00000559550 DDRGK1Q96HY6 314 aa7.52□□□□□ -1.21
CASC4-210ENST00000559550 PCDHB15Q9Y5E8 787 aa7.52□□□□□ -1.21
CASC4-210ENST00000559550 MYSM1Q5VVJ2 828 aa7.51□□□□□ -1.21
CASC4-210ENST00000559550 VASH1Q7L8A9 365 aaPredicted RBP7.51□□□□□ -1.21
CASC4-210ENST00000559550 SH3BP5LQ7L8J4 393 aa7.51□□□□□ -1.21
CASC4-210ENST00000559550 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
CASC4-210ENST00000559550 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
CASC4-210ENST00000559550 PPP1R26Q5T8A7 1209 aaPredicted RBP7.5□□□□□ -1.21
CASC4-210ENST00000559550 RSBN1LQ6PCB5 846 aaPredicted RBP7.5□□□□□ -1.21
CASC4-210ENST00000559550 HRCP23327 699 aa7.49□□□□□ -1.21
CASC4-210ENST00000559550 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
CASC4-210ENST00000559550 Q8N3U1 123 aa7.49□□□□□ -1.21
CASC4-210ENST00000559550 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
CASC4-210ENST00000559550 LIMD1Q9UGP4 676 aa7.49□□□□□ -1.21
CASC4-210ENST00000559550 MAP3K10Q02779 954 aa7.48□□□□□ -1.21
CASC4-210ENST00000559550 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
CASC4-210ENST00000559550 RIC3Q7Z5B4 369 aa7.48□□□□□ -1.21
CASC4-210ENST00000559550 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
CASC4-210ENST00000559550 PHF20L1A8MW92 1017 aa7.47□□□□□ -1.21
CASC4-210ENST00000559550 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
CASC4-210ENST00000559550 RSPH6AQ9H0K4 717 aa7.47□□□□□ -1.21
CASC4-210ENST00000559550 CUEDC1Q9NWM3 386 aaPredicted RBP7.47□□□□□ -1.21
CASC4-210ENST00000559550 K7ELQ4 463 aaPredicted RBP7.46□□□□□ -1.22
CASC4-210ENST00000559550 CLK2P49760 499 aaKnown RBP7.46□□□□□ -1.22
CASC4-210ENST00000559550 PROCA1Q8NCQ7 364 aaPredicted RBP7.46□□□□□ -1.22
CASC4-210ENST00000559550 RNF217Q8TC41 542 aa7.46□□□□□ -1.22
CASC4-210ENST00000559550 SKIV2LQ15477 1246 aaKnown RBP7.45□□□□□ -1.22
CASC4-210ENST00000559550 CSPP1Q1MSJ5 1256 aa7.45□□□□□ -1.22
CASC4-210ENST00000559550 AGBL1Q96MI9 1066 aa7.45□□□□□ -1.22
CASC4-210ENST00000559550 ZBTB3Q9H5J0 574 aa7.45□□□□□ -1.22
CASC4-210ENST00000559550 ENAMQ9NRM1 1142 aa7.45□□□□□ -1.22
CASC4-210ENST00000559550 PGPEP1Q9NXJ5 209 aa7.45□□□□□ -1.22
CASC4-210ENST00000559550 QPCTQ16769 361 aa7.44□□□□□ -1.22
CASC4-210ENST00000559550 FBXO31Q5XUX0 539 aaPredicted RBP7.44□□□□□ -1.22
CASC4-210ENST00000559550 ARMC2Q8NEN0 867 aa7.44□□□□□ -1.22
CASC4-210ENST00000559550 CABLES1Q8TDN4 633 aa7.44□□□□□ -1.22
CASC4-210ENST00000559550 INSM2Q96T92 566 aaPredicted RBP7.44□□□□□ -1.22
CASC4-210ENST00000559550 ERFEQ4G0M1 354 aa7.43□□□□□ -1.22
CASC4-210ENST00000559550 PRPF38BQ5VTL8 546 aaKnown RBP7.43□□□□□ -1.22
CASC4-210ENST00000559550 BEND7Q8N7W2 519 aaPredicted RBP7.43□□□□□ -1.22
CASC4-210ENST00000559550 MAGEB6P1A0A0J9YX57 407 aa7.42□□□□□ -1.22
CASC4-210ENST00000559550 BAG6P46379 1132 aa7.42□□□□□ -1.22
CASC4-210ENST00000559550 NBPF14Q5TI25 921 aa7.42□□□□□ -1.22
CASC4-210ENST00000559550 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
CASC4-210ENST00000559550 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
CASC4-210ENST00000559550 FOXD4L5Q5VV16 416 aaPredicted RBP7.41□□□□□ -1.22
CASC4-210ENST00000559550 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.41□□□□□ -1.22
CASC4-210ENST00000559550 GOPCQ9HD26 462 aa7.41□□□□□ -1.22
CASC4-210ENST00000559550 MBIPQ9NS73 344 aa7.41□□□□□ -1.22
CASC4-210ENST00000559550 LILRB3O75022 631 aa7.4□□□□□ -1.22
CASC4-210ENST00000559550 BCRP11274 1271 aa7.4□□□□□ -1.22
CASC4-210ENST00000559550 RELBQ01201 579 aa7.4□□□□□ -1.22
CASC4-210ENST00000559550 RTL5Q5HYW3 569 aaPredicted RBP7.4□□□□□ -1.22
CASC4-210ENST00000559550 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
CASC4-210ENST00000559550 IGF1RP08069 1367 aa7.4□□□□□ -1.22
CASC4-210ENST00000559550 ACDQ96AP0 544 aa7.39□□□□□ -1.23
CASC4-210ENST00000559550 PCMTD1Q96MG8 357 aaPredicted RBP7.39□□□□□ -1.23
CASC4-210ENST00000559550 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
CASC4-210ENST00000559550 KRBA1A5PL33 1030 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms