RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 CHMP4CQ96CF2 233 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ZFP91Q96JP5 570 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 TBC1D32Q96NH3 1257 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 C22orf23Q9BZE7 217 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 NOL7Q9UMY1 257 aaKnown RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ATF5Q9Y2D1 282 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 TRPM1Q7Z4N2 1603 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ABCC11Q96J66 1382 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ANKRD18BA2A2Z9 1011 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 A6NNZ2 444 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 TUBB8Q3ZCM7 444 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 JAKMIP3Q5VZ66 844 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 DRC7Q8IY82 874 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 CPSF2Q9P2I0 782 aaKnown RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 FEZ2Q9UHY8 353 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 NEURL4Q96JN8 1562 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 PRAG1Q86YV5 1406 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ZBTB7CA1YPR0 619 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 U2SURPO15042 1029 aaKnown RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ZNF853P0CG23 659 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 SATB1Q01826 763 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 OS9Q13438 667 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ZKSCAN8Q15776 578 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF11Q86T75 865 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 STK11IPQ8N1F8 1099 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 GBP3Q9H0R5 595 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ZHX1Q9UKY1 873 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 KDM5AP29375 1690 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 DUOX2Q9NRD8 1548 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 ERLIN1O75477 346 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 CDR1P51861 262 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 SLFN5Q08AF3 891 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 GRIPAP1Q4V328 841 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 ZKSCAN2Q63HK3 967 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 FILIP1Q7Z7B0 1213 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 ZNF397Q8NF99 534 aaPredicted RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 PPM1EQ8WY54 764 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 PPP1R9BQ96SB3 815 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF3Q9H094 633 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 RRAGDQ9NQL2 400 aaPredicted RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 DDX49Q9Y6V7 483 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 UNC13BO14795 1591 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 ATP8B1O43520 1251 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 NF2P35240 595 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 DCTN1Q14203 1278 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 FAM135AQ9P2D6 1515 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 MAGI1Q96QZ7 1491 aaPredicted RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 SCAF11Q99590 1463 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC171Q6TFL3 1326 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 CACNB1Q02641 598 aaPredicted RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF8Q3BBV2 869 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF9Q3BBW0 867 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 SPATS2Q86XZ4 545 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC112Q8NEF3 446 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 GCC1Q96CN9 775 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 UTP14AQ9BVJ6 771 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 SWAP70Q9UH65 585 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 ZKSCAN5Q9Y2L8 839 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC172P0C7W6 258 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 IRX1P78414 480 aaPredicted RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 KLHL40Q2TBA0 621 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 HSP90B2PQ58FF3 399 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 RBM26Q5T8P6 1007 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 SMC5Q8IY18 1101 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 ANKRD20A12PQ8NF67 263 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 DCAF11Q8TEB1 546 aa2.85□□□□□ -1.95
RGPD1-204ENST00000559485 PUS7Q96PZ0 661 aaKnown RBP2.85□□□□□ -1.95
RGPD1-204ENST00000559485 SYNJ2O15056 1496 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 RNF17Q9BXT8 1623 aaKnown RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 GOLGA6L19H0YKK7 550 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 SRPK2P78362 688 aaKnown RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC27Q2M243 656 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 CT47A1Q5JQC4 288 aaPredicted RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 CNPY4Q8N129 248 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 STK31Q9BXU1 1019 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 MKRN1Q9UHC7 482 aaKnown RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 PRDM4Q9UKN5 801 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 CEP83Q9Y592 693 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 TTC37Q6PGP7 1564 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 ST20-MTHFSA0A0A6YYL1 179 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 GOLGA6L7A0A1B0GV03 622 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 KIAA0754O94854 1291 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 ATP6V1AP38606 617 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 CBX1P83916 185 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 DNAJC21Q5F1R6 531 aaKnown RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 APLFQ8IW19 511 aaPredicted RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 RUNDC1Q96C34 613 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 RMDN2Q96LZ7 410 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 SRRTQ9BXP5 876 aaKnown RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 GZF1Q9H116 711 aaPredicted RBP2.84□□□□□ -1.95
RGPD1-204ENST00000559485 SHROOM2Q13796 1616 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 KIAA1210Q9ULL0 1709 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 IL16Q14005 1332 aa2.84□□□□□ -1.95
RGPD1-204ENST00000559485 K7ELQ4 463 aaPredicted RBP2.84□□□□□ -1.96
RGPD1-204ENST00000559485 XRCC6P12956 609 aaKnown RBP eCLIP2.84□□□□□ -1.96
RGPD1-204ENST00000559485 AKAP17AQ02040 695 aaKnown RBP2.84□□□□□ -1.96
RGPD1-204ENST00000559485 MKRN4PQ13434 485 aaPredicted RBP2.84□□□□□ -1.96
RGPD1-204ENST00000559485 SETDB1Q15047 1291 aa2.84□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC191Q8NCU4 936 aa2.84□□□□□ -1.96
RGPD1-204ENST00000559485 DTNBP1Q96EV8 351 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms