RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CRB1P82279 1406 aa15.36■□□□□ 0.05
SPG11-216ENST00000559347 FAM208AQ9UK61 1670 aaKnown RBP15.36■□□□□ 0.05
SPG11-216ENST00000559347 NME9Q86XW9 330 aa15.36■□□□□ 0.05
SPG11-216ENST00000559347 KCNH5Q8NCM2 988 aa15.36■□□□□ 0.05
SPG11-216ENST00000559347 BLMP54132 1417 aaPredicted RBP15.35■□□□□ 0.05
SPG11-216ENST00000559347 A0A0G2JS52 829 aa15.35■□□□□ 0.05
SPG11-216ENST00000559347 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
SPG11-216ENST00000559347 MYT1Q01538 1121 aa15.35■□□□□ 0.05
SPG11-216ENST00000559347 LARP1Q6PKG0 1096 aaKnown RBP15.35■□□□□ 0.05
SPG11-216ENST00000559347 ARHGEF25Q86VW2 580 aa15.35■□□□□ 0.05
SPG11-216ENST00000559347 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
SPG11-216ENST00000559347 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
SPG11-216ENST00000559347 SOX12O15370 315 aa15.33■□□□□ 0.04
SPG11-216ENST00000559347 PEAK1Q9H792 1746 aa15.33■□□□□ 0.04
SPG11-216ENST00000559347 ANKRD26Q9UPS8 1709 aa15.33■□□□□ 0.04
SPG11-216ENST00000559347 EVA1CP58658 441 aa15.32■□□□□ 0.04
SPG11-216ENST00000559347 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
SPG11-216ENST00000559347 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
SPG11-216ENST00000559347 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
SPG11-216ENST00000559347 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
SPG11-216ENST00000559347 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
SPG11-216ENST00000559347 SBF2Q86WG5 1849 aa15.31■□□□□ 0.04
SPG11-216ENST00000559347 WDR17Q8IZU2 1322 aa15.3■□□□□ 0.04
SPG11-216ENST00000559347 TCP11L2Q8N4U5 519 aa15.3■□□□□ 0.04
SPG11-216ENST00000559347 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
SPG11-216ENST00000559347 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
SPG11-216ENST00000559347 THRAP3Q9Y2W1 955 aaKnown RBP15.29■□□□□ 0.04
SPG11-216ENST00000559347 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
SPG11-216ENST00000559347 NSD3Q9BZ95 1437 aa15.27■□□□□ 0.04
SPG11-216ENST00000559347 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPG11-216ENST00000559347 RREB1Q92766 1687 aa15.27■□□□□ 0.03
SPG11-216ENST00000559347 ERBB3P21860 1342 aa15.26■□□□□ 0.03
SPG11-216ENST00000559347 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
SPG11-216ENST00000559347 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
SPG11-216ENST00000559347 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
SPG11-216ENST00000559347 COG3Q96JB2 828 aa15.25■□□□□ 0.03
SPG11-216ENST00000559347 RGPD3A6NKT7 1758 aaPredicted RBP15.25■□□□□ 0.03
SPG11-216ENST00000559347 RGPD4Q7Z3J3 1758 aa15.25■□□□□ 0.03
SPG11-216ENST00000559347 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
SPG11-216ENST00000559347 OVOS2A0A0G2JMS6 1433 aa15.24■□□□□ 0.03
SPG11-216ENST00000559347 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
SPG11-216ENST00000559347 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
SPG11-216ENST00000559347 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
SPG11-216ENST00000559347 NUP188Q5SRE5 1749 aa15.23■□□□□ 0.03
SPG11-216ENST00000559347 MAP2P11137 1827 aaKnown RBP15.22■□□□□ 0.03
SPG11-216ENST00000559347 FYB1O15117 783 aa15.22■□□□□ 0.03
SPG11-216ENST00000559347 CSB-PGBD3P0DP91 1061 aa15.22■□□□□ 0.03
SPG11-216ENST00000559347 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
SPG11-216ENST00000559347 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
SPG11-216ENST00000559347 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
SPG11-216ENST00000559347 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
SPG11-216ENST00000559347 MAP3K19Q56UN5 1328 aa15.21■□□□□ 0.03
SPG11-216ENST00000559347 DEFB132Q7Z7B7 95 aa15.21■□□□□ 0.03
SPG11-216ENST00000559347 CARD14Q9BXL6 1004 aa15.21■□□□□ 0.03
SPG11-216ENST00000559347 NHSQ6T4R5 1651 aa15.21■□□□□ 0.03
SPG11-216ENST00000559347 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
SPG11-216ENST00000559347 FAM196AQ6ZSG2 479 aa15.2■□□□□ 0.02
SPG11-216ENST00000559347 ANKRD24Q8TF21 1146 aa15.2■□□□□ 0.02
SPG11-216ENST00000559347 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
SPG11-216ENST00000559347 IP6K1Q92551 441 aa15.19■□□□□ 0.02
SPG11-216ENST00000559347 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
SPG11-216ENST00000559347 FBLN1P23142 703 aa15.18■□□□□ 0.02
SPG11-216ENST00000559347 HOXC9P31274 260 aa15.18■□□□□ 0.02
SPG11-216ENST00000559347 BAG6P46379 1132 aa15.18■□□□□ 0.02
SPG11-216ENST00000559347 DDB1Q16531 1140 aa15.18■□□□□ 0.02
SPG11-216ENST00000559347 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
SPG11-216ENST00000559347 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
SPG11-216ENST00000559347 BCL9O00512 1426 aa15.17■□□□□ 0.02
SPG11-216ENST00000559347 KIF24Q5T7B8 1368 aa15.16■□□□□ 0.02
SPG11-216ENST00000559347 TRIM37O94972 964 aa15.16■□□□□ 0.02
SPG11-216ENST00000559347 RRS1Q15050 365 aaKnown RBP15.16■□□□□ 0.02
SPG11-216ENST00000559347 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
SPG11-216ENST00000559347 CGNL1Q0VF96 1302 aa15.16■□□□□ 0.02
SPG11-216ENST00000559347 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
SPG11-216ENST00000559347 FLT4P35916 1363 aa15.15■□□□□ 0.02
SPG11-216ENST00000559347 C11orf95C9JLR9 678 aaPredicted RBP15.15■□□□□ 0.02
SPG11-216ENST00000559347 AMPHP49418 695 aa15.15■□□□□ 0.02
SPG11-216ENST00000559347 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
SPG11-216ENST00000559347 BTAF1O14981 1849 aa15.14■□□□□ 0.01
SPG11-216ENST00000559347 PKD1L3Q7Z443 1732 aa15.14■□□□□ 0.01
SPG11-216ENST00000559347 INSRP06213 1382 aa15.13■□□□□ 0.01
SPG11-216ENST00000559347 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
SPG11-216ENST00000559347 MEGF6O75095 1541 aa15.13■□□□□ 0.01
SPG11-216ENST00000559347 IL2RBP14784 551 aa15.13■□□□□ 0.01
SPG11-216ENST00000559347 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
SPG11-216ENST00000559347 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
SPG11-216ENST00000559347 LTV1Q96GA3 475 aaPredicted RBP15.12■□□□□ 0.01
SPG11-216ENST00000559347 LRP5O75197 1615 aa15.12■□□□□ 0.01
SPG11-216ENST00000559347 KIF7Q2M1P5 1343 aa15.12■□□□□ 0.01
SPG11-216ENST00000559347 NSD2O96028 1365 aa15.11■□□□□ 0.01
SPG11-216ENST00000559347 EXOC5O00471 708 aa15.1■□□□□ 0.01
SPG11-216ENST00000559347 APBA3O96018 575 aa15.1■□□□□ 0.01
SPG11-216ENST00000559347 EZH2Q15910 746 aaKnown RBP15.1■□□□□ 0.01
SPG11-216ENST00000559347 CAMKK2Q96RR4 588 aa15.1■□□□□ 0.01
SPG11-216ENST00000559347 PANK3Q9H999 370 aa15.1■□□□□ 0.01
SPG11-216ENST00000559347 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
SPG11-216ENST00000559347 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
SPG11-216ENST00000559347 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0
SPG11-216ENST00000559347 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
SPG11-216ENST00000559347 KAT6BQ8WYB5 2073 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms