RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 AMPHP49418 695 aa6.03□□□□□ -1.44
SNX1-205ENST00000559339 FOXD4L1Q9NU39 408 aa6.03□□□□□ -1.44
SNX1-205ENST00000559339 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.02□□□□□ -1.45
SNX1-205ENST00000559339 CGNL1Q0VF96 1302 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 WDR17Q8IZU2 1322 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 CRB1P82279 1406 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 C11orf95C9JLR9 678 aaPredicted RBP6.02□□□□□ -1.45
SNX1-205ENST00000559339 FYB1O15117 783 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 POTEDQ86YR6 584 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 CDCA7Q9BWT1 371 aaPredicted RBP6.02□□□□□ -1.45
SNX1-205ENST00000559339 ZRANB1Q9UGI0 708 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 AXIN2Q9Y2T1 843 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 SLIT3O75094 1523 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 ABCA3Q99758 1704 aa6.02□□□□□ -1.45
SNX1-205ENST00000559339 NRKQ7Z2Y5 1582 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 CAMTA1Q9Y6Y1 1673 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 FAM196AQ6ZSG2 479 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 CARD10Q9BWT7 1032 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 GGNBP2Q9H3C7 697 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 NLRP2Q9NX02 1062 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 COL5A2P05997 1499 aaPredicted RBP6.01□□□□□ -1.45
SNX1-205ENST00000559339 PLCH1Q4KWH8 1693 aa6.01□□□□□ -1.45
SNX1-205ENST00000559339 ERBB3P21860 1342 aa6□□□□□ -1.45
SNX1-205ENST00000559339 BLMP54132 1417 aaPredicted RBP6□□□□□ -1.45
SNX1-205ENST00000559339 PHRF1Q9P1Y6 1649 aaKnown RBP6□□□□□ -1.45
SNX1-205ENST00000559339 DDB1Q16531 1140 aa6□□□□□ -1.45
SNX1-205ENST00000559339 ANKRD24Q8TF21 1146 aa6□□□□□ -1.45
SNX1-205ENST00000559339 IP6K1Q92551 441 aa6□□□□□ -1.45
SNX1-205ENST00000559339 CARD14Q9BXL6 1004 aa6□□□□□ -1.45
SNX1-205ENST00000559339 KNSTRNQ9Y448 316 aa6□□□□□ -1.45
SNX1-205ENST00000559339 CCDC7Q96M83 1385 aa6□□□□□ -1.45
SNX1-205ENST00000559339 GLI3P10071 1580 aa6□□□□□ -1.45
SNX1-205ENST00000559339 PIK3C2AO00443 1686 aa6□□□□□ -1.45
SNX1-205ENST00000559339 MAP3K19Q56UN5 1328 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 OVOS2A0A0J9YW53 1432 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 OVOS2Q6IE36 1432 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 NSD3Q9BZ95 1437 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 EP400Q96L91 3159 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 AKAP12Q02952 1782 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 EXOC5O00471 708 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 PPM1GO15355 546 aaPredicted RBP5.99□□□□□ -1.45
SNX1-205ENST00000559339 IL2RBP14784 551 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 BAG6P46379 1132 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 FAM182BQ5T319 152 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 LTV1Q96GA3 475 aaPredicted RBP5.99□□□□□ -1.45
SNX1-205ENST00000559339 PANK3Q9H999 370 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 MON2Q7Z3U7 1717 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 CRYBG1Q9Y4K1 1723 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 ABCC6O95255 1503 aa5.99□□□□□ -1.45
SNX1-205ENST00000559339 SMG6Q86US8 1419 aaKnown RBP5.99□□□□□ -1.45
SNX1-205ENST00000559339 RTL1A6NKG5 1358 aa5.98□□□□□ -1.45
SNX1-205ENST00000559339 KIF24Q5T7B8 1368 aa5.98□□□□□ -1.45
SNX1-205ENST00000559339 ZBTB22O15209 634 aa5.98□□□□□ -1.45
SNX1-205ENST00000559339 HOXC9P31274 260 aa5.98□□□□□ -1.45
SNX1-205ENST00000559339 RRS1Q15050 365 aaKnown RBP5.98□□□□□ -1.45
SNX1-205ENST00000559339 NFAT5O94916 1531 aa5.98□□□□□ -1.45
SNX1-205ENST00000559339 KIF7Q2M1P5 1343 aa5.98□□□□□ -1.45
SNX1-205ENST00000559339 NRAPQ86VF7 1730 aa5.97□□□□□ -1.45
SNX1-205ENST00000559339 TRIM37O94972 964 aa5.97□□□□□ -1.45
SNX1-205ENST00000559339 APBA3O96018 575 aa5.97□□□□□ -1.45
SNX1-205ENST00000559339 FBLN1P23142 703 aa5.97□□□□□ -1.45
SNX1-205ENST00000559339 MORC1Q86VD1 984 aa5.97□□□□□ -1.45
SNX1-205ENST00000559339 LMO7Q8WWI1 1683 aa5.97□□□□□ -1.45
SNX1-205ENST00000559339 NSD2O96028 1365 aa5.96□□□□□ -1.45
SNX1-205ENST00000559339 FLT4P35916 1363 aa5.96□□□□□ -1.45
SNX1-205ENST00000559339 SLC4A2P04920 1241 aa5.96□□□□□ -1.46
SNX1-205ENST00000559339 TNNT2P45379 298 aaPredicted RBP5.96□□□□□ -1.46
SNX1-205ENST00000559339 HSP90AB2PQ58FF8 381 aa5.96□□□□□ -1.46
SNX1-205ENST00000559339 DEFB132Q7Z7B7 95 aa5.96□□□□□ -1.46
SNX1-205ENST00000559339 RAPGEF4Q8WZA2 1011 aa5.96□□□□□ -1.46
SNX1-205ENST00000559339 OVOS2A0A0G2JMS6 1433 aa5.96□□□□□ -1.46
SNX1-205ENST00000559339 INSRP06213 1382 aa5.95□□□□□ -1.46
SNX1-205ENST00000559339 EMILIN1Q9Y6C2 1016 aa5.95□□□□□ -1.46
SNX1-205ENST00000559339 WASHC2AQ641Q2 1341 aa5.95□□□□□ -1.46
SNX1-205ENST00000559339 USP54Q70EL1 1684 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 THSD7AQ9UPZ6 1657 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 PARD3Q8TEW0 1356 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 TATP17735 454 aaPredicted RBP5.94□□□□□ -1.46
SNX1-205ENST00000559339 EN1Q05925 392 aaPredicted RBP5.94□□□□□ -1.46
SNX1-205ENST00000559339 NBPF14Q5TI25 921 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 NBPF6Q5VWK0 638 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 MARCH10Q8NA82 808 aaPredicted RBP5.94□□□□□ -1.46
SNX1-205ENST00000559339 ZCRB1Q8TBF4 217 aaKnown RBP5.94□□□□□ -1.46
SNX1-205ENST00000559339 DDX54Q8TDD1 881 aaKnown RBP5.94□□□□□ -1.46
SNX1-205ENST00000559339 NBPF4Q96M43 638 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 BCL11BQ9C0K0 894 aaPredicted RBP5.94□□□□□ -1.46
SNX1-205ENST00000559339 POLKQ9UBT6 870 aa5.94□□□□□ -1.46
SNX1-205ENST00000559339 COL18A1P39060 1754 aa5.93□□□□□ -1.46
SNX1-205ENST00000559339 DISP2A7MBM2 1401 aa5.93□□□□□ -1.46
SNX1-205ENST00000559339 PLSCR1O15162 318 aa5.93□□□□□ -1.46
SNX1-205ENST00000559339 ZEB1P37275 1124 aaPredicted RBP5.93□□□□□ -1.46
SNX1-205ENST00000559339 AMER1Q5JTC6 1135 aaPredicted RBP5.93□□□□□ -1.46
SNX1-205ENST00000559339 BCL9O00512 1426 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 TNS2Q63HR2 1409 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 MYOM1P52179 1685 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 PER1O15534 1290 aaPredicted RBP5.92□□□□□ -1.46
SNX1-205ENST00000559339 MYCNP04198 464 aaPredicted RBP5.92□□□□□ -1.46
SNX1-205ENST00000559339 EZH2Q15910 746 aaKnown RBP5.92□□□□□ -1.46
SNX1-205ENST00000559339 CC2D1BQ5T0F9 858 aaKnown RBP5.92□□□□□ -1.46
SNX1-205ENST00000559339 USHBP1Q8N6Y0 703 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms