RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 IP6K1Q92551 441 aa20.11■□□□□ 0.81
SNRPA1-207ENST00000559309 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
SNRPA1-207ENST00000559309 ZC3H6P61129 1189 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-207ENST00000559309 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-207ENST00000559309 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-207ENST00000559309 UPF1Q92900 1129 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNRPA1-207ENST00000559309 MYBBP1AQ9BQG0 1328 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-207ENST00000559309 HOXC9P31274 260 aa20.09■□□□□ 0.81
SNRPA1-207ENST00000559309 AXIN2Q9Y2T1 843 aa20.09■□□□□ 0.81
SNRPA1-207ENST00000559309 COL5A2P05997 1499 aaPredicted RBP20.08■□□□□ 0.81
SNRPA1-207ENST00000559309 BCL9LQ86UU0 1499 aa20.08■□□□□ 0.81
SNRPA1-207ENST00000559309 RXRBP28702 533 aa20.08■□□□□ 0.81
SNRPA1-207ENST00000559309 RGPD1P0DJD0 1748 aa20.07■□□□□ 0.8
SNRPA1-207ENST00000559309 PRDM11Q9NQV5 511 aa20.07■□□□□ 0.8
SNRPA1-207ENST00000559309 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
SNRPA1-207ENST00000559309 NUTM2BA6NNL0 878 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 NUTM2EB1AL46 878 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 SOX12O15370 315 aa20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 TNNT2P45379 298 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 MTHFSP49914 203 aa20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 NCAPD2Q15021 1401 aa20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 NUTM2AQ8IVF1 878 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-207ENST00000559309 ANP32CO43423 234 aa20.05■□□□□ 0.8
SNRPA1-207ENST00000559309 ADAMTS2O95450 1211 aa20.05■□□□□ 0.8
SNRPA1-207ENST00000559309 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
SNRPA1-207ENST00000559309 CHRNA2Q15822 529 aa20.04■□□□□ 0.8
SNRPA1-207ENST00000559309 HSP90AB2PQ58FF8 381 aa20.04■□□□□ 0.8
SNRPA1-207ENST00000559309 ERBB3P21860 1342 aa20.03■□□□□ 0.8
SNRPA1-207ENST00000559309 AFF2P51816 1311 aa20.03■□□□□ 0.8
SNRPA1-207ENST00000559309 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
SNRPA1-207ENST00000559309 AMPHP49418 695 aa20.01■□□□□ 0.79
SNRPA1-207ENST00000559309 RGPD2P0DJD1 1756 aa20■□□□□ 0.79
SNRPA1-207ENST00000559309 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
SNRPA1-207ENST00000559309 BTG4Q9NY30 223 aa20■□□□□ 0.79
SNRPA1-207ENST00000559309 IL13P35225 146 aa19.99■□□□□ 0.79
SNRPA1-207ENST00000559309 WDR17Q8IZU2 1322 aa19.99■□□□□ 0.79
SNRPA1-207ENST00000559309 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-207ENST00000559309 C8orf37Q96NL8 207 aa19.98■□□□□ 0.79
SNRPA1-207ENST00000559309 ATRNO75882 1429 aa19.98■□□□□ 0.79
SNRPA1-207ENST00000559309 UNC5CLQ8IV45 518 aa19.97■□□□□ 0.79
SNRPA1-207ENST00000559309 ANKRD24Q8TF21 1146 aa19.97■□□□□ 0.79
SNRPA1-207ENST00000559309 NGLY1Q96IV0 654 aa19.97■□□□□ 0.79
SNRPA1-207ENST00000559309 CRB1P82279 1406 aa19.96■□□□□ 0.79
SNRPA1-207ENST00000559309 RBM6P78332 1123 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-207ENST00000559309 CCDC184Q52MB2 194 aa19.96■□□□□ 0.79
SNRPA1-207ENST00000559309 QTRT2Q9H974 415 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-207ENST00000559309 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
SNRPA1-207ENST00000559309 KDRP35968 1356 aa19.95■□□□□ 0.79
SNRPA1-207ENST00000559309 WNK3Q9BYP7 1800 aa19.95■□□□□ 0.78
SNRPA1-207ENST00000559309 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
SNRPA1-207ENST00000559309 SRCAPQ6ZRS2 3230 aa19.95■□□□□ 0.78
SNRPA1-207ENST00000559309 VPS72Q15906 364 aa19.94■□□□□ 0.78
SNRPA1-207ENST00000559309 GLI3P10071 1580 aa19.94■□□□□ 0.78
SNRPA1-207ENST00000559309 PPM1GO15355 546 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 MIER1Q8N108 512 aa19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 USP21Q9UK80 565 aa19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 SPATA31A5Q5VU36 1347 aa19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 SPATA31A7Q8IWB4 1347 aa19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 PLEKHG2Q9H7P9 1386 aa19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 RGS12O14924 1447 aa19.93■□□□□ 0.78
SNRPA1-207ENST00000559309 NBPF6Q5VWK0 638 aa19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 LARP1Q6PKG0 1096 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 NBPF4Q96M43 638 aa19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 EYA1Q99502 592 aa19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 CARD10Q9BWT7 1032 aa19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
SNRPA1-207ENST00000559309 ZBTB7CA1YPR0 619 aa19.91■□□□□ 0.78
SNRPA1-207ENST00000559309 SPATA31A1Q5TZJ5 1347 aa19.91■□□□□ 0.78
SNRPA1-207ENST00000559309 THSD7AQ9UPZ6 1657 aa19.9■□□□□ 0.78
SNRPA1-207ENST00000559309 PNISRQ8TF01 805 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-207ENST00000559309 ONECUT3O60422 494 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-207ENST00000559309 STRN4Q9NRL3 753 aa19.87■□□□□ 0.77
SNRPA1-207ENST00000559309 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-207ENST00000559309 THRAP3Q9Y2W1 955 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-207ENST00000559309 PARP4Q9UKK3 1724 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-207ENST00000559309 PKD1L3Q7Z443 1732 aa19.86■□□□□ 0.77
SNRPA1-207ENST00000559309 BARGINQ6ZT62 677 aa19.86■□□□□ 0.77
SNRPA1-207ENST00000559309 LTV1Q96GA3 475 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-207ENST00000559309 EVA1CP58658 441 aa19.85■□□□□ 0.77
SNRPA1-207ENST00000559309 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-207ENST00000559309 SHANK3Q9BYB0 1731 aa19.85■□□□□ 0.77
SNRPA1-207ENST00000559309 TOM1L2Q6ZVM7 507 aa19.84■□□□□ 0.77
SNRPA1-207ENST00000559309 MEGF6O75095 1541 aa19.84■□□□□ 0.77
SNRPA1-207ENST00000559309 AEBP1Q8IUX7 1158 aa19.83■□□□□ 0.77
SNRPA1-207ENST00000559309 RSPH6AQ9H0K4 717 aa19.83■□□□□ 0.77
SNRPA1-207ENST00000559309 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
SNRPA1-207ENST00000559309 NLRP2Q9NX02 1062 aa19.83■□□□□ 0.77
SNRPA1-207ENST00000559309 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
SNRPA1-207ENST00000559309 OVOS2A0A0G2JMS6 1433 aa19.83■□□□□ 0.76
SNRPA1-207ENST00000559309 CSB-PGBD3P0DP91 1061 aa19.82■□□□□ 0.76
SNRPA1-207ENST00000559309 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
SNRPA1-207ENST00000559309 LRRC37A3O60309 1634 aa19.82■□□□□ 0.76
SNRPA1-207ENST00000559309 FCHSD2O94868 740 aa19.81■□□□□ 0.76
SNRPA1-207ENST00000559309 USHBP1Q8N6Y0 703 aa19.81■□□□□ 0.76
SNRPA1-207ENST00000559309 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
SNRPA1-207ENST00000559309 SULT6B1Q6IMI4 303 aa19.8■□□□□ 0.76
SNRPA1-207ENST00000559309 EP400Q96L91 3159 aa19.8■□□□□ 0.76
SNRPA1-207ENST00000559309 CDCA7Q9BWT1 371 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms