RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 WDR17Q8IZU2 1322 aa23.41■■□□□ 1.34
CDC42BPB-205ENST00000559245 PLSCR1O15162 318 aa23.41■■□□□ 1.34
CDC42BPB-205ENST00000559245 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
CDC42BPB-205ENST00000559245 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
CDC42BPB-205ENST00000559245 CPSF1Q10570 1443 aaKnown RBP23.41■■□□□ 1.34
CDC42BPB-205ENST00000559245 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
CDC42BPB-205ENST00000559245 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
CDC42BPB-205ENST00000559245 PTF1AQ7RTS3 328 aa23.38■■□□□ 1.33
CDC42BPB-205ENST00000559245 BCL11BQ9C0K0 894 aaPredicted RBP23.38■■□□□ 1.33
CDC42BPB-205ENST00000559245 TTC21BQ7Z4L5 1316 aa23.37■■□□□ 1.33
CDC42BPB-205ENST00000559245 ARHGEF25Q86VW2 580 aa23.37■■□□□ 1.33
CDC42BPB-205ENST00000559245 MARCH10Q8NA82 808 aaPredicted RBP23.37■■□□□ 1.33
CDC42BPB-205ENST00000559245 ZNF692Q9BU19 519 aaPredicted RBP23.37■■□□□ 1.33
CDC42BPB-205ENST00000559245 YY1P25490 414 aa23.36■■□□□ 1.33
CDC42BPB-205ENST00000559245 KCNH5Q8NCM2 988 aa23.36■■□□□ 1.33
CDC42BPB-205ENST00000559245 CDCA7Q9BWT1 371 aaPredicted RBP23.36■■□□□ 1.33
CDC42BPB-205ENST00000559245 ANO8Q9HCE9 1232 aaPredicted RBP23.36■■□□□ 1.33
CDC42BPB-205ENST00000559245 NINLQ9Y2I6 1382 aa23.36■■□□□ 1.33
CDC42BPB-205ENST00000559245 BCL9O00512 1426 aa23.34■■□□□ 1.33
CDC42BPB-205ENST00000559245 MON2Q7Z3U7 1717 aa23.34■■□□□ 1.33
CDC42BPB-205ENST00000559245 SOX12O15370 315 aa23.34■■□□□ 1.33
CDC42BPB-205ENST00000559245 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
CDC42BPB-205ENST00000559245 TTC21AQ8NDW8 1320 aa23.33■■□□□ 1.33
CDC42BPB-205ENST00000559245 NFAT5O94916 1531 aa23.33■■□□□ 1.33
CDC42BPB-205ENST00000559245 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
CDC42BPB-205ENST00000559245 PROM2Q8N271 834 aa23.32■■□□□ 1.32
CDC42BPB-205ENST00000559245 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
CDC42BPB-205ENST00000559245 ROCK2O75116 1388 aaKnown RBP23.31■■□□□ 1.32
CDC42BPB-205ENST00000559245 DCAF8L1A6NGE4 600 aa23.31■■□□□ 1.32
CDC42BPB-205ENST00000559245 LTN1O94822 1766 aa23.29■■□□□ 1.32
CDC42BPB-205ENST00000559245 KTN1Q86UP2 1357 aaKnown RBP23.29■■□□□ 1.32
CDC42BPB-205ENST00000559245 ABCC6O95255 1503 aa23.29■■□□□ 1.32
CDC42BPB-205ENST00000559245 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
CDC42BPB-205ENST00000559245 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
CDC42BPB-205ENST00000559245 MYOM1P52179 1685 aa23.28■■□□□ 1.32
CDC42BPB-205ENST00000559245 EXOC5O00471 708 aa23.28■■□□□ 1.32
CDC42BPB-205ENST00000559245 USP54Q70EL1 1684 aa23.28■■□□□ 1.32
CDC42BPB-205ENST00000559245 CCDC7Q96M83 1385 aa23.27■■□□□ 1.32
CDC42BPB-205ENST00000559245 NHSQ6T4R5 1651 aa23.27■■□□□ 1.32
CDC42BPB-205ENST00000559245 TXNRD1Q16881 649 aa23.26■■□□□ 1.31
CDC42BPB-205ENST00000559245 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
CDC42BPB-205ENST00000559245 ZBTB7AO95365 584 aa23.25■■□□□ 1.31
CDC42BPB-205ENST00000559245 NEUROD1Q13562 356 aa23.24■■□□□ 1.31
CDC42BPB-205ENST00000559245 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
CDC42BPB-205ENST00000559245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDC42BPB-205ENST00000559245 BTAF1O14981 1849 aa23.22■■□□□ 1.31
CDC42BPB-205ENST00000559245 PTGER2P43116 358 aa23.21■■□□□ 1.31
CDC42BPB-205ENST00000559245 SLC15A2Q16348 729 aa23.21■■□□□ 1.31
CDC42BPB-205ENST00000559245 ATF5Q9Y2D1 282 aaPredicted RBP23.21■■□□□ 1.31
CDC42BPB-205ENST00000559245 USP31Q70CQ4 1352 aa23.21■■□□□ 1.31
CDC42BPB-205ENST00000559245 SBNO2Q9Y2G9 1366 aa23.19■■□□□ 1.3
CDC42BPB-205ENST00000559245 ERBB3P21860 1342 aa23.19■■□□□ 1.3
CDC42BPB-205ENST00000559245 CD163L1Q9NR16 1453 aa23.18■■□□□ 1.3
CDC42BPB-205ENST00000559245 CHD4Q14839 1912 aa23.18■■□□□ 1.3
CDC42BPB-205ENST00000559245 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
CDC42BPB-205ENST00000559245 NME9Q86XW9 330 aa23.17■■□□□ 1.3
CDC42BPB-205ENST00000559245 NLRP2Q9NX02 1062 aa23.17■■□□□ 1.3
CDC42BPB-205ENST00000559245 PAPPAQ13219 1627 aa23.16■■□□□ 1.3
CDC42BPB-205ENST00000559245 MTFR1LQ9H019 292 aa23.15■■□□□ 1.3
CDC42BPB-205ENST00000559245 UTRNP46939 3433 aa23.15■■□□□ 1.3
CDC42BPB-205ENST00000559245 IL2RBP14784 551 aa23.14■■□□□ 1.29
CDC42BPB-205ENST00000559245 TMC1Q8TDI8 760 aa23.14■■□□□ 1.29
CDC42BPB-205ENST00000559245 HDGFL2Q7Z4V5 671 aaPredicted RBP23.12■■□□□ 1.29
CDC42BPB-205ENST00000559245 ANKRD24Q8TF21 1146 aa23.12■■□□□ 1.29
CDC42BPB-205ENST00000559245 SYT17Q9BSW7 474 aa23.12■■□□□ 1.29
CDC42BPB-205ENST00000559245 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
CDC42BPB-205ENST00000559245 FAM208AQ9UK61 1670 aaKnown RBP23.12■■□□□ 1.29
CDC42BPB-205ENST00000559245 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
CDC42BPB-205ENST00000559245 SGIP1Q9BQI5 828 aa23.11■■□□□ 1.29
CDC42BPB-205ENST00000559245 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
CDC42BPB-205ENST00000559245 SLC12A5Q9H2X9 1139 aa23.11■■□□□ 1.29
CDC42BPB-205ENST00000559245 QSER1Q2KHR3 1735 aa23.09■■□□□ 1.29
CDC42BPB-205ENST00000559245 A0A1W2PP64 1363 aa23.07■■□□□ 1.28
CDC42BPB-205ENST00000559245 RGPD2P0DJD1 1756 aa23.06■■□□□ 1.28
CDC42BPB-205ENST00000559245 TERF2IPQ9NYB0 399 aa23.06■■□□□ 1.28
CDC42BPB-205ENST00000559245 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
CDC42BPB-205ENST00000559245 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
CDC42BPB-205ENST00000559245 ARXQ96QS3 562 aa23.05■■□□□ 1.28
CDC42BPB-205ENST00000559245 LRRC4BQ9NT99 713 aa23.05■■□□□ 1.28
CDC42BPB-205ENST00000559245 ZNF784Q8NCA9 323 aaPredicted RBP23.04■■□□□ 1.28
CDC42BPB-205ENST00000559245 DOT1LQ8TEK3 1739 aa23.03■■□□□ 1.28
CDC42BPB-205ENST00000559245 IP6K1Q92551 441 aa23.03■■□□□ 1.28
CDC42BPB-205ENST00000559245 COL24A1Q17RW2 1714 aa23.02■■□□□ 1.28
CDC42BPB-205ENST00000559245 DDX54Q8TDD1 881 aaKnown RBP23.02■■□□□ 1.28
CDC42BPB-205ENST00000559245 LY75O60449 1722 aa23.02■■□□□ 1.28
CDC42BPB-205ENST00000559245 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
CDC42BPB-205ENST00000559245 MAP3K5Q99683 1374 aa23.01■■□□□ 1.27
CDC42BPB-205ENST00000559245 LTV1Q96GA3 475 aaPredicted RBP23.01■■□□□ 1.27
CDC42BPB-205ENST00000559245 PUS7Q96PZ0 661 aaKnown RBP23.01■■□□□ 1.27
CDC42BPB-205ENST00000559245 SLC27A3Q5K4L6 730 aa22.99■■□□□ 1.27
CDC42BPB-205ENST00000559245 AKT1S1Q96B36 256 aa22.99■■□□□ 1.27
CDC42BPB-205ENST00000559245 SLC16A10Q8TF71 515 aa22.97■■□□□ 1.27
CDC42BPB-205ENST00000559245 TONSLQ96HA7 1378 aa22.97■■□□□ 1.27
CDC42BPB-205ENST00000559245 MAP3K19Q56UN5 1328 aa22.95■■□□□ 1.26
CDC42BPB-205ENST00000559245 SYTL4Q96C24 671 aaPredicted RBP22.95■■□□□ 1.26
CDC42BPB-205ENST00000559245 COG3Q96JB2 828 aa22.95■■□□□ 1.26
CDC42BPB-205ENST00000559245 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
CDC42BPB-205ENST00000559245 PNPLA7Q6ZV29 1317 aa22.94■■□□□ 1.26
CDC42BPB-205ENST00000559245 HOXC9P31274 260 aa22.94■■□□□ 1.26
CDC42BPB-205ENST00000559245 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms