RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 HDGFP51858 240 aaKnown RBP10.37□□□□□ -0.75
TRAF3-206ENST00000558880 MEX3CQ5U5Q3 659 aaKnown RBP10.37□□□□□ -0.75
TRAF3-206ENST00000558880 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
TRAF3-206ENST00000558880 RBM33Q96EV2 1170 aaKnown RBP10.37□□□□□ -0.75
TRAF3-206ENST00000558880 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
TRAF3-206ENST00000558880 TECPR2O15040 1411 aa10.35□□□□□ -0.75
TRAF3-206ENST00000558880 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
TRAF3-206ENST00000558880 LRPPRCP42704 1394 aaKnown RBP10.35□□□□□ -0.75
TRAF3-206ENST00000558880 ABCC11Q96J66 1382 aa10.35□□□□□ -0.75
TRAF3-206ENST00000558880 YTHDC2Q9H6S0 1430 aaKnown RBP10.34□□□□□ -0.75
TRAF3-206ENST00000558880 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
TRAF3-206ENST00000558880 TMEM94Q12767 1356 aa10.34□□□□□ -0.75
TRAF3-206ENST00000558880 PIK3R4Q99570 1358 aa10.34□□□□□ -0.75
TRAF3-206ENST00000558880 ROBO2Q9HCK4 1378 aa10.34□□□□□ -0.75
TRAF3-206ENST00000558880 PLEKHH1Q9ULM0 1364 aa10.34□□□□□ -0.75
TRAF3-206ENST00000558880 PHLPP1O60346 1717 aa10.33□□□□□ -0.76
TRAF3-206ENST00000558880 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
TRAF3-206ENST00000558880 KCNA6P17658 529 aa10.33□□□□□ -0.76
TRAF3-206ENST00000558880 ZNF687Q8N1G0 1237 aa10.33□□□□□ -0.76
TRAF3-206ENST00000558880 DIP2AQ14689 1571 aa10.33□□□□□ -0.76
TRAF3-206ENST00000558880 NWD1Q149M9 1564 aa10.32□□□□□ -0.76
TRAF3-206ENST00000558880 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
TRAF3-206ENST00000558880 JCADQ9P266 1359 aa10.32□□□□□ -0.76
TRAF3-206ENST00000558880 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
TRAF3-206ENST00000558880 PROSER2Q86WR7 435 aaPredicted RBP10.32□□□□□ -0.76
TRAF3-206ENST00000558880 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
TRAF3-206ENST00000558880 XRN1Q8IZH2 1706 aaKnown RBP10.31□□□□□ -0.76
TRAF3-206ENST00000558880 PDIA6Q15084 440 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
TRAF3-206ENST00000558880 VSIG10Q8N0Z9 540 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 DDX12PQ92771 950 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 SIRT1Q96EB6 747 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 TESK2Q96S53 571 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 AXIN2Q9Y2T1 843 aa10.31□□□□□ -0.76
TRAF3-206ENST00000558880 LAMC1P11047 1609 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 DLC1Q96QB1 1528 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
TRAF3-206ENST00000558880 RXRBP28702 533 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 FOSBP53539 338 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 WAPLQ7Z5K2 1190 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 CARD11Q9BXL7 1154 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 STK26Q9P289 416 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 PTCH1Q13635 1447 aa10.3□□□□□ -0.76
TRAF3-206ENST00000558880 LRP6O75581 1613 aa10.29□□□□□ -0.76
TRAF3-206ENST00000558880 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
TRAF3-206ENST00000558880 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
TRAF3-206ENST00000558880 USP47Q96K76 1375 aa10.28□□□□□ -0.76
TRAF3-206ENST00000558880 C11orf95C9JLR9 678 aaPredicted RBP10.28□□□□□ -0.76
TRAF3-206ENST00000558880 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
TRAF3-206ENST00000558880 BCANQ96GW7 911 aa10.28□□□□□ -0.76
TRAF3-206ENST00000558880 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
TRAF3-206ENST00000558880 MSH6P52701 1360 aa10.27□□□□□ -0.76
TRAF3-206ENST00000558880 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
TRAF3-206ENST00000558880 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
TRAF3-206ENST00000558880 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 PRAM1Q96QH2 718 aa10.27□□□□□ -0.77
TRAF3-206ENST00000558880 HIRIP3Q9BW71 556 aaPredicted RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 SLAIN2Q9P270 581 aa10.27□□□□□ -0.77
TRAF3-206ENST00000558880 PCDHGA10Q9Y5H3 936 aa10.27□□□□□ -0.77
TRAF3-206ENST00000558880 CHD2O14647 1828 aaKnown RBP10.27□□□□□ -0.77
TRAF3-206ENST00000558880 SPATA31A6Q5VVP1 1343 aa10.26□□□□□ -0.77
TRAF3-206ENST00000558880 NKTRP30414 1462 aaKnown RBP10.25□□□□□ -0.77
TRAF3-206ENST00000558880 KNDC1Q76NI1 1749 aa10.25□□□□□ -0.77
TRAF3-206ENST00000558880 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
TRAF3-206ENST00000558880 PSEN2P49810 448 aa10.25□□□□□ -0.77
TRAF3-206ENST00000558880 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
TRAF3-206ENST00000558880 ADAM33Q9BZ11 813 aa10.25□□□□□ -0.77
TRAF3-206ENST00000558880 COL16A1Q07092 1604 aaPredicted RBP10.25□□□□□ -0.77
TRAF3-206ENST00000558880 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
TRAF3-206ENST00000558880 ARHGEF28Q8N1W1 1705 aaKnown RBP10.24□□□□□ -0.77
TRAF3-206ENST00000558880 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.24□□□□□ -0.77
TRAF3-206ENST00000558880 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
TRAF3-206ENST00000558880 TULP4Q9NRJ4 1543 aa10.23□□□□□ -0.77
TRAF3-206ENST00000558880 PHF14O94880 888 aa10.23□□□□□ -0.77
TRAF3-206ENST00000558880 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAF3-206ENST00000558880 NBR1Q14596 966 aa10.23□□□□□ -0.77
TRAF3-206ENST00000558880 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
TRAF3-206ENST00000558880 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
TRAF3-206ENST00000558880 CENPJQ9HC77 1338 aaPredicted RBP10.23□□□□□ -0.77
TRAF3-206ENST00000558880 CDK12Q9NYV4 1490 aaPredicted RBP10.23□□□□□ -0.77
TRAF3-206ENST00000558880 PTGER2P43116 358 aa10.22□□□□□ -0.77
TRAF3-206ENST00000558880 SAFB2Q14151 953 aaKnown RBP eCLIP10.22□□□□□ -0.77
TRAF3-206ENST00000558880 TYW1BQ6NUM6 668 aa10.22□□□□□ -0.77
TRAF3-206ENST00000558880 AFF2P51816 1311 aa10.22□□□□□ -0.77
TRAF3-206ENST00000558880 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
TRAF3-206ENST00000558880 ARHGAP33O14559 1287 aa10.21□□□□□ -0.77
TRAF3-206ENST00000558880 PBX2P40425 430 aa10.21□□□□□ -0.77
TRAF3-206ENST00000558880 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
TRAF3-206ENST00000558880 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
TRAF3-206ENST00000558880 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.78
TRAF3-206ENST00000558880 NCOA3Q9Y6Q9 1424 aa10.21□□□□□ -0.78
TRAF3-206ENST00000558880 RGS12O14924 1447 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms