RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 RREB1Q92766 1687 aa16.85■□□□□ 0.29
SEMA4B-205ENST00000558848 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
SEMA4B-205ENST00000558848 ABCC6O95255 1503 aa16.84■□□□□ 0.29
SEMA4B-205ENST00000558848 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 OVOS2A0A0J9YW53 1432 aa16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 LRRC37A3O60309 1634 aa16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 OVOS2Q6IE36 1432 aa16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 PUS7Q96PZ0 661 aaKnown RBP16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 CARD10Q9BWT7 1032 aa16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
SEMA4B-205ENST00000558848 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
SEMA4B-205ENST00000558848 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
SEMA4B-205ENST00000558848 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
SEMA4B-205ENST00000558848 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
SEMA4B-205ENST00000558848 DDB1Q16531 1140 aa16.81■□□□□ 0.28
SEMA4B-205ENST00000558848 NUP188Q5SRE5 1749 aa16.8■□□□□ 0.28
SEMA4B-205ENST00000558848 ZBTB7CA1YPR0 619 aa16.8■□□□□ 0.28
SEMA4B-205ENST00000558848 PLSCR1O15162 318 aa16.8■□□□□ 0.28
SEMA4B-205ENST00000558848 MARCH10Q8NA82 808 aaPredicted RBP16.79■□□□□ 0.28
SEMA4B-205ENST00000558848 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
SEMA4B-205ENST00000558848 TESK2Q96S53 571 aa16.78■□□□□ 0.28
SEMA4B-205ENST00000558848 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
SEMA4B-205ENST00000558848 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
SEMA4B-205ENST00000558848 RGPD3A6NKT7 1758 aaPredicted RBP16.78■□□□□ 0.28
SEMA4B-205ENST00000558848 RGPD4Q7Z3J3 1758 aa16.78■□□□□ 0.28
SEMA4B-205ENST00000558848 TONSLQ96HA7 1378 aa16.77■□□□□ 0.28
SEMA4B-205ENST00000558848 EDC4Q6P2E9 1401 aaKnown RBP16.77■□□□□ 0.27
SEMA4B-205ENST00000558848 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
SEMA4B-205ENST00000558848 SBF2Q86WG5 1849 aa16.76■□□□□ 0.27
SEMA4B-205ENST00000558848 PTF1AQ7RTS3 328 aa16.76■□□□□ 0.27
SEMA4B-205ENST00000558848 NME9Q86XW9 330 aa16.76■□□□□ 0.27
SEMA4B-205ENST00000558848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
SEMA4B-205ENST00000558848 ERBB3P21860 1342 aa16.75■□□□□ 0.27
SEMA4B-205ENST00000558848 RGPD5Q99666 1765 aa16.75■□□□□ 0.27
SEMA4B-205ENST00000558848 SOX12O15370 315 aa16.75■□□□□ 0.27
SEMA4B-205ENST00000558848 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
SEMA4B-205ENST00000558848 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
SEMA4B-205ENST00000558848 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
SEMA4B-205ENST00000558848 PROM2Q8N271 834 aa16.74■□□□□ 0.27
SEMA4B-205ENST00000558848 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
SEMA4B-205ENST00000558848 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SEMA4B-205ENST00000558848 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
SEMA4B-205ENST00000558848 TNS2Q63HR2 1409 aa16.72■□□□□ 0.27
SEMA4B-205ENST00000558848 EXOC5O00471 708 aa16.72■□□□□ 0.27
SEMA4B-205ENST00000558848 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
SEMA4B-205ENST00000558848 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.27
SEMA4B-205ENST00000558848 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
SEMA4B-205ENST00000558848 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
SEMA4B-205ENST00000558848 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
SEMA4B-205ENST00000558848 KCNQ2O43526 872 aa16.67■□□□□ 0.26
SEMA4B-205ENST00000558848 IP6K1Q92551 441 aa16.67■□□□□ 0.26
SEMA4B-205ENST00000558848 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
SEMA4B-205ENST00000558848 LTN1O94822 1766 aa16.66■□□□□ 0.26
SEMA4B-205ENST00000558848 IL2RBP14784 551 aa16.66■□□□□ 0.26
SEMA4B-205ENST00000558848 NLRP2Q9NX02 1062 aa16.66■□□□□ 0.26
SEMA4B-205ENST00000558848 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
SEMA4B-205ENST00000558848 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
SEMA4B-205ENST00000558848 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
SEMA4B-205ENST00000558848 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.26
SEMA4B-205ENST00000558848 NHSQ6T4R5 1651 aa16.64■□□□□ 0.25
SEMA4B-205ENST00000558848 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
SEMA4B-205ENST00000558848 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
SEMA4B-205ENST00000558848 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
SEMA4B-205ENST00000558848 COG3Q96JB2 828 aa16.61■□□□□ 0.25
SEMA4B-205ENST00000558848 HOXC9P31274 260 aa16.6■□□□□ 0.25
SEMA4B-205ENST00000558848 PTGER2P43116 358 aa16.6■□□□□ 0.25
SEMA4B-205ENST00000558848 USP47Q96K76 1375 aa16.6■□□□□ 0.25
SEMA4B-205ENST00000558848 FYB1O15117 783 aa16.59■□□□□ 0.25
SEMA4B-205ENST00000558848 FBLN1P23142 703 aa16.59■□□□□ 0.25
SEMA4B-205ENST00000558848 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
SEMA4B-205ENST00000558848 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
SEMA4B-205ENST00000558848 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
SEMA4B-205ENST00000558848 TMF1P82094 1093 aa16.58■□□□□ 0.24
SEMA4B-205ENST00000558848 RTL1A6NKG5 1358 aa16.58■□□□□ 0.24
SEMA4B-205ENST00000558848 SGIP1Q9BQI5 828 aa16.57■□□□□ 0.24
SEMA4B-205ENST00000558848 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
SEMA4B-205ENST00000558848 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
SEMA4B-205ENST00000558848 TIMELESSQ9UNS1 1208 aa16.56■□□□□ 0.24
SEMA4B-205ENST00000558848 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
SEMA4B-205ENST00000558848 BTAF1O14981 1849 aa16.54■□□□□ 0.24
SEMA4B-205ENST00000558848 ZBTB7AO95365 584 aa16.54■□□□□ 0.24
SEMA4B-205ENST00000558848 AMPHP49418 695 aa16.54■□□□□ 0.24
SEMA4B-205ENST00000558848 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
SEMA4B-205ENST00000558848 UTRNP46939 3433 aa16.54■□□□□ 0.24
SEMA4B-205ENST00000558848 RRS1Q15050 365 aaKnown RBP16.53■□□□□ 0.24
SEMA4B-205ENST00000558848 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
SEMA4B-205ENST00000558848 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
SEMA4B-205ENST00000558848 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
SEMA4B-205ENST00000558848 MEGF6O75095 1541 aa16.53■□□□□ 0.24
SEMA4B-205ENST00000558848 NSD2O96028 1365 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 SLC27A3Q5K4L6 730 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
SEMA4B-205ENST00000558848 CLSPNQ9HAW4 1339 aa16.51■□□□□ 0.23
SEMA4B-205ENST00000558848 SHANK3Q9BYB0 1731 aa16.51■□□□□ 0.23
SEMA4B-205ENST00000558848 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms