RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SOS2Q07890 1332 aaPredicted RBP14.62□□□□□ -0.07
SPG11-212ENST00000558790 FMN2Q9NZ56 1722 aa14.61□□□□□ -0.07
SPG11-212ENST00000558790 RGPD8O14715 1765 aaPredicted RBP14.61□□□□□ -0.07
SPG11-212ENST00000558790 KIF3CO14782 793 aa14.61□□□□□ -0.07
SPG11-212ENST00000558790 POTEJP0CG39 1038 aa14.61□□□□□ -0.07
SPG11-212ENST00000558790 MYOM2P54296 1465 aa14.61□□□□□ -0.07
SPG11-212ENST00000558790 PXDNQ92626 1479 aa14.61□□□□□ -0.07
SPG11-212ENST00000558790 ORAI2Q96SN7 254 aa14.6□□□□□ -0.07
SPG11-212ENST00000558790 CEP350Q5VT06 3117 aa14.59□□□□□ -0.07
SPG11-212ENST00000558790 NBR1Q14596 966 aa14.59□□□□□ -0.07
SPG11-212ENST00000558790 KIF1AQ12756 1690 aa14.58□□□□□ -0.07
SPG11-212ENST00000558790 FOXK1P85037 733 aa14.58□□□□□ -0.08
SPG11-212ENST00000558790 ABCA3Q99758 1704 aa14.58□□□□□ -0.08
SPG11-212ENST00000558790 PLPP6Q8IY26 295 aa14.57□□□□□ -0.08
SPG11-212ENST00000558790 RPGRIP1LQ68CZ1 1315 aa14.56□□□□□ -0.08
SPG11-212ENST00000558790 TECPR2O15040 1411 aa14.56□□□□□ -0.08
SPG11-212ENST00000558790 UTRNP46939 3433 aa14.56□□□□□ -0.08
SPG11-212ENST00000558790 GJD4Q96KN9 370 aaPredicted RBP14.55□□□□□ -0.08
SPG11-212ENST00000558790 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
SPG11-212ENST00000558790 PLCH1Q4KWH8 1693 aa14.55□□□□□ -0.08
SPG11-212ENST00000558790 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
SPG11-212ENST00000558790 RALGAPBQ86X10 1494 aa14.54□□□□□ -0.08
SPG11-212ENST00000558790 SPATA31E1Q6ZUB1 1445 aa14.53□□□□□ -0.08
SPG11-212ENST00000558790 NPHP3Q7Z494 1330 aa14.53□□□□□ -0.08
SPG11-212ENST00000558790 CAMK2BQ13554 666 aa14.53□□□□□ -0.08
SPG11-212ENST00000558790 CCDC144AA2RUR9 1427 aa14.52□□□□□ -0.08
SPG11-212ENST00000558790 CAMTA1Q9Y6Y1 1673 aa14.52□□□□□ -0.09
SPG11-212ENST00000558790 PIK3C2GO75747 1445 aa14.51□□□□□ -0.09
SPG11-212ENST00000558790 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
SPG11-212ENST00000558790 R3HDM1Q15032 1099 aaKnown RBP14.51□□□□□ -0.09
SPG11-212ENST00000558790 PLEKHH1Q9ULM0 1364 aa14.5□□□□□ -0.09
SPG11-212ENST00000558790 NWD2Q9ULI1 1742 aa14.5□□□□□ -0.09
SPG11-212ENST00000558790 XPCQ01831 940 aaPredicted RBP14.5□□□□□ -0.09
SPG11-212ENST00000558790 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
SPG11-212ENST00000558790 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
SPG11-212ENST00000558790 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
SPG11-212ENST00000558790 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
SPG11-212ENST00000558790 ARHGEF1Q92888 912 aaKnown RBP14.49□□□□□ -0.09
SPG11-212ENST00000558790 FOXO3O43524 673 aa14.48□□□□□ -0.09
SPG11-212ENST00000558790 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
SPG11-212ENST00000558790 SLIT2O94813 1529 aa14.47□□□□□ -0.09
SPG11-212ENST00000558790 NUTM2FA1L443 756 aa14.47□□□□□ -0.09
SPG11-212ENST00000558790 WAPLQ7Z5K2 1190 aa14.47□□□□□ -0.09
SPG11-212ENST00000558790 STK26Q9P289 416 aa14.47□□□□□ -0.09
SPG11-212ENST00000558790 YTHDC2Q9H6S0 1430 aaKnown RBP14.47□□□□□ -0.09
SPG11-212ENST00000558790 NRAPQ86VF7 1730 aa14.46□□□□□ -0.1
SPG11-212ENST00000558790 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.1
SPG11-212ENST00000558790 ABCC11Q96J66 1382 aa14.46□□□□□ -0.1
SPG11-212ENST00000558790 EN1Q05925 392 aaPredicted RBP14.45□□□□□ -0.1
SPG11-212ENST00000558790 SEPT12Q8IYM1 358 aa14.45□□□□□ -0.1
SPG11-212ENST00000558790 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
SPG11-212ENST00000558790 RGPD1P0DJD0 1748 aa14.44□□□□□ -0.1
SPG11-212ENST00000558790 TRPM3Q9HCF6 1732 aaPredicted RBP14.44□□□□□ -0.1
SPG11-212ENST00000558790 TNS3Q68CZ2 1445 aa14.44□□□□□ -0.1
SPG11-212ENST00000558790 SENP3-EIF4A1A0A087X0R7 540 aa14.44□□□□□ -0.1
SPG11-212ENST00000558790 DPYSL4O14531 572 aa14.44□□□□□ -0.1
SPG11-212ENST00000558790 RGL3Q3MIN7 710 aa14.44□□□□□ -0.1
SPG11-212ENST00000558790 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
SPG11-212ENST00000558790 TMEM132EQ6IEE7 984 aa14.43□□□□□ -0.1
SPG11-212ENST00000558790 CRYBG1Q9Y4K1 1723 aa14.43□□□□□ -0.1
SPG11-212ENST00000558790 SPATA31A3Q5VYP0 1347 aa14.42□□□□□ -0.1
SPG11-212ENST00000558790 UNC5CLQ8IV45 518 aa14.42□□□□□ -0.1
SPG11-212ENST00000558790 ALS2Q96Q42 1657 aa14.42□□□□□ -0.1
SPG11-212ENST00000558790 BAG6P46379 1132 aa14.41□□□□□ -0.1
SPG11-212ENST00000558790 SCUBE2Q9NQ36 999 aa14.41□□□□□ -0.1
SPG11-212ENST00000558790 KRT27Q7Z3Y8 459 aa14.4□□□□□ -0.1
SPG11-212ENST00000558790 SLAIN1Q8ND83 568 aa14.4□□□□□ -0.1
SPG11-212ENST00000558790 MPHOSPH9Q99550 1183 aa14.4□□□□□ -0.1
SPG11-212ENST00000558790 DLC1Q96QB1 1528 aa14.4□□□□□ -0.1
SPG11-212ENST00000558790 SEMA3EO15041 775 aa14.39□□□□□ -0.11
SPG11-212ENST00000558790 FAM182BQ5T319 152 aa14.39□□□□□ -0.11
SPG11-212ENST00000558790 ARIH1Q9Y4X5 557 aaPredicted RBP14.39□□□□□ -0.11
SPG11-212ENST00000558790 ADGRB1O14514 1584 aa14.38□□□□□ -0.11
SPG11-212ENST00000558790 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
SPG11-212ENST00000558790 MAMSTRQ6ZN01 415 aa14.37□□□□□ -0.11
SPG11-212ENST00000558790 KRT28Q7Z3Y7 464 aa14.37□□□□□ -0.11
SPG11-212ENST00000558790 ZNF784Q8NCA9 323 aaPredicted RBP14.37□□□□□ -0.11
SPG11-212ENST00000558790 ITSN1Q15811 1721 aa14.37□□□□□ -0.11
SPG11-212ENST00000558790 ARHGEF28Q8N1W1 1705 aaKnown RBP14.36□□□□□ -0.11
SPG11-212ENST00000558790 EZH2Q15910 746 aaKnown RBP14.36□□□□□ -0.11
SPG11-212ENST00000558790 SBNO1A3KN83 1393 aa14.35□□□□□ -0.11
SPG11-212ENST00000558790 NUP188Q5SRE5 1749 aa14.35□□□□□ -0.11
SPG11-212ENST00000558790 ANKARQ7Z5J8 1434 aa14.35□□□□□ -0.11
SPG11-212ENST00000558790 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
SPG11-212ENST00000558790 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
SPG11-212ENST00000558790 RREB1Q92766 1687 aa14.34□□□□□ -0.11
SPG11-212ENST00000558790 ONECUT3O60422 494 aaPredicted RBP14.34□□□□□ -0.11
SPG11-212ENST00000558790 OXER1Q8TDS5 423 aa14.34□□□□□ -0.11
SPG11-212ENST00000558790 C14orf93Q9H972 538 aaKnown RBP14.34□□□□□ -0.11
SPG11-212ENST00000558790 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
SPG11-212ENST00000558790 PHRF1Q9P1Y6 1649 aaKnown RBP14.33□□□□□ -0.11
SPG11-212ENST00000558790 TULP4Q9NRJ4 1543 aa14.33□□□□□ -0.12
SPG11-212ENST00000558790 MAP3K9P80192 1104 aa14.33□□□□□ -0.12
SPG11-212ENST00000558790 SAFB2Q14151 953 aaKnown RBP eCLIP14.33□□□□□ -0.12
SPG11-212ENST00000558790 CFAP70Q5T0N1 1121 aa14.33□□□□□ -0.12
SPG11-212ENST00000558790 SIRT1Q96EB6 747 aa14.33□□□□□ -0.12
SPG11-212ENST00000558790 PRAM1Q96QH2 718 aa14.33□□□□□ -0.12
SPG11-212ENST00000558790 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.12
SPG11-212ENST00000558790 VPS72Q15906 364 aa14.32□□□□□ -0.12
SPG11-212ENST00000558790 CHD4Q14839 1912 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms