RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 RRS1Q15050 365 aaKnown RBP23.8■■□□□ 1.4
TPM1-214ENST00000558544 RGS17Q9UGC6 210 aaPredicted RBP23.8■■□□□ 1.4
TPM1-214ENST00000558544 MAP3K19Q56UN5 1328 aa23.79■■□□□ 1.4
TPM1-214ENST00000558544 ZNF772Q68DY9 489 aaPredicted RBP23.78■■□□□ 1.4
TPM1-214ENST00000558544 UNC5CLQ8IV45 518 aa23.78■■□□□ 1.4
TPM1-214ENST00000558544 COL5A2P05997 1499 aaPredicted RBP23.77■■□□□ 1.4
TPM1-214ENST00000558544 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
TPM1-214ENST00000558544 ATRNO75882 1429 aa23.75■■□□□ 1.39
TPM1-214ENST00000558544 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
TPM1-214ENST00000558544 AMPHP49418 695 aa23.75■■□□□ 1.39
TPM1-214ENST00000558544 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
TPM1-214ENST00000558544 RGPD2P0DJD1 1756 aa23.74■■□□□ 1.39
TPM1-214ENST00000558544 STRN4Q9NRL3 753 aa23.74■■□□□ 1.39
TPM1-214ENST00000558544 FAM208AQ9UK61 1670 aaKnown RBP23.73■■□□□ 1.39
TPM1-214ENST00000558544 BLMP54132 1417 aaPredicted RBP23.73■■□□□ 1.39
TPM1-214ENST00000558544 HOXC9P31274 260 aa23.72■■□□□ 1.39
TPM1-214ENST00000558544 POTEAQ6S8J7 498 aa23.72■■□□□ 1.39
TPM1-214ENST00000558544 IP6K1Q92551 441 aa23.72■■□□□ 1.39
TPM1-214ENST00000558544 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
TPM1-214ENST00000558544 FLT4P35916 1363 aa23.71■■□□□ 1.39
TPM1-214ENST00000558544 GLI3P10071 1580 aa23.71■■□□□ 1.39
TPM1-214ENST00000558544 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
TPM1-214ENST00000558544 EVA1CP58658 441 aa23.71■■□□□ 1.39
TPM1-214ENST00000558544 QTRT2Q9H974 415 aaKnown RBP23.71■■□□□ 1.39
TPM1-214ENST00000558544 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
TPM1-214ENST00000558544 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
TPM1-214ENST00000558544 PPM1GO15355 546 aaPredicted RBP23.7■■□□□ 1.38
TPM1-214ENST00000558544 VPS72Q15906 364 aa23.69■■□□□ 1.38
TPM1-214ENST00000558544 WNK3Q9BYP7 1800 aa23.69■■□□□ 1.38
TPM1-214ENST00000558544 LARP1Q6PKG0 1096 aaKnown RBP23.68■■□□□ 1.38
TPM1-214ENST00000558544 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
TPM1-214ENST00000558544 ERBB3P21860 1342 aa23.67■■□□□ 1.38
TPM1-214ENST00000558544 CDK12Q9NYV4 1490 aaPredicted RBP23.67■■□□□ 1.38
TPM1-214ENST00000558544 HSP90AB2PQ58FF8 381 aa23.66■■□□□ 1.38
TPM1-214ENST00000558544 ANKRD24Q8TF21 1146 aa23.66■■□□□ 1.38
TPM1-214ENST00000558544 LTV1Q96GA3 475 aaPredicted RBP23.66■■□□□ 1.38
TPM1-214ENST00000558544 WDR17Q8IZU2 1322 aa23.66■■□□□ 1.38
TPM1-214ENST00000558544 PARD3Q8TEW0 1356 aa23.66■■□□□ 1.38
TPM1-214ENST00000558544 CRB1P82279 1406 aa23.66■■□□□ 1.38
TPM1-214ENST00000558544 CSB-PGBD3P0DP91 1061 aa23.65■■□□□ 1.38
TPM1-214ENST00000558544 INSRP06213 1382 aa23.65■■□□□ 1.38
TPM1-214ENST00000558544 GJD4Q96KN9 370 aaPredicted RBP23.65■■□□□ 1.38
TPM1-214ENST00000558544 SPATA31A5Q5VU36 1347 aa23.64■■□□□ 1.37
TPM1-214ENST00000558544 SPATA31A7Q8IWB4 1347 aa23.64■■□□□ 1.37
TPM1-214ENST00000558544 TOM1L2Q6ZVM7 507 aa23.64■■□□□ 1.37
TPM1-214ENST00000558544 RBM6P78332 1123 aaKnown RBP23.63■■□□□ 1.37
TPM1-214ENST00000558544 SPATA31A1Q5TZJ5 1347 aa23.62■■□□□ 1.37
TPM1-214ENST00000558544 RXRBP28702 533 aa23.62■■□□□ 1.37
TPM1-214ENST00000558544 MTHFSP49914 203 aa23.62■■□□□ 1.37
TPM1-214ENST00000558544 USP35Q9P2H5 1018 aa23.62■■□□□ 1.37
TPM1-214ENST00000558544 PPP2R1AP30153 589 aa23.6■■□□□ 1.37
TPM1-214ENST00000558544 NLRP2Q9NX02 1062 aa23.59■■□□□ 1.37
TPM1-214ENST00000558544 THSD7AQ9UPZ6 1657 aa23.59■■□□□ 1.37
TPM1-214ENST00000558544 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
TPM1-214ENST00000558544 RALBP1Q15311 655 aa23.58■■□□□ 1.37
TPM1-214ENST00000558544 RGS12O14924 1447 aa23.57■■□□□ 1.36
TPM1-214ENST00000558544 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
TPM1-214ENST00000558544 FAM98CQ17RN3 349 aaKnown RBP23.56■■□□□ 1.36
TPM1-214ENST00000558544 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
TPM1-214ENST00000558544 CARD10Q9BWT7 1032 aa23.56■■□□□ 1.36
TPM1-214ENST00000558544 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
TPM1-214ENST00000558544 PARP4Q9UKK3 1724 aaKnown RBP23.56■■□□□ 1.36
TPM1-214ENST00000558544 EIF4A2Q14240 407 aaKnown RBP23.55■■□□□ 1.36
TPM1-214ENST00000558544 PRKRIP1Q9H875 184 aaPredicted RBP23.55■■□□□ 1.36
TPM1-214ENST00000558544 LRRC37A3O60309 1634 aa23.54■■□□□ 1.36
TPM1-214ENST00000558544 NBPF6Q5VWK0 638 aa23.53■■□□□ 1.36
TPM1-214ENST00000558544 NBPF4Q96M43 638 aa23.53■■□□□ 1.36
TPM1-214ENST00000558544 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
TPM1-214ENST00000558544 USHBP1Q8N6Y0 703 aa23.52■■□□□ 1.36
TPM1-214ENST00000558544 MYBBP1AQ9BQG0 1328 aaKnown RBP23.52■■□□□ 1.36
TPM1-214ENST00000558544 A0A0G2JS52 829 aa23.52■■□□□ 1.36
TPM1-214ENST00000558544 MYT1Q01538 1121 aa23.52■■□□□ 1.36
TPM1-214ENST00000558544 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
TPM1-214ENST00000558544 DISP2A7MBM2 1401 aa23.5■■□□□ 1.35
TPM1-214ENST00000558544 ONECUT3O60422 494 aaPredicted RBP23.49■■□□□ 1.35
TPM1-214ENST00000558544 IL13P35225 146 aa23.49■■□□□ 1.35
TPM1-214ENST00000558544 NCAPD2Q15021 1401 aa23.49■■□□□ 1.35
TPM1-214ENST00000558544 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
TPM1-214ENST00000558544 EYA1Q99502 592 aa23.49■■□□□ 1.35
TPM1-214ENST00000558544 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
TPM1-214ENST00000558544 SEPT12Q8IYM1 358 aa23.48■■□□□ 1.35
TPM1-214ENST00000558544 ANP32CO43423 234 aa23.47■■□□□ 1.35
TPM1-214ENST00000558544 ILDR2Q71H61 639 aa23.47■■□□□ 1.35
TPM1-214ENST00000558544 MEGF6O75095 1541 aa23.47■■□□□ 1.35
TPM1-214ENST00000558544 IGSF1Q8N6C5 1336 aa23.47■■□□□ 1.35
TPM1-214ENST00000558544 SHANK3Q9BYB0 1731 aa23.46■■□□□ 1.35
TPM1-214ENST00000558544 IL2RBP14784 551 aa23.45■■□□□ 1.34
TPM1-214ENST00000558544 PKD1L3Q7Z443 1732 aa23.43■■□□□ 1.34
TPM1-214ENST00000558544 CDCA7Q9BWT1 371 aaPredicted RBP23.43■■□□□ 1.34
TPM1-214ENST00000558544 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
TPM1-214ENST00000558544 OVOS2A0A0G2JMS6 1433 aa23.4■■□□□ 1.34
TPM1-214ENST00000558544 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
TPM1-214ENST00000558544 AEBP1Q8IUX7 1158 aa23.4■■□□□ 1.34
TPM1-214ENST00000558544 RAPGEF4Q8WZA2 1011 aa23.4■■□□□ 1.34
TPM1-214ENST00000558544 EP400Q96L91 3159 aa23.4■■□□□ 1.34
TPM1-214ENST00000558544 DDB1Q16531 1140 aa23.4■■□□□ 1.34
TPM1-214ENST00000558544 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
TPM1-214ENST00000558544 SULT6B1Q6IMI4 303 aa23.39■■□□□ 1.33
TPM1-214ENST00000558544 KDRP35968 1356 aa23.38■■□□□ 1.33
TPM1-214ENST00000558544 HMOX1P09601 288 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms