RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 AXIN1O15169 862 aa6.01□□□□□ -1.45
HERC1-203ENST00000558532 ABL2P42684 1182 aa6.01□□□□□ -1.45
HERC1-203ENST00000558532 CDV3Q9UKY7 258 aaKnown RBP6.01□□□□□ -1.45
HERC1-203ENST00000558532 ESPNB1AK53 854 aa6□□□□□ -1.45
HERC1-203ENST00000558532 NBPF20Q3BBV1 942 aa6□□□□□ -1.45
HERC1-203ENST00000558532 INTS6LQ5JSJ4 861 aaKnown RBP6□□□□□ -1.45
HERC1-203ENST00000558532 DZIP3Q86Y13 1208 aaKnown RBP6□□□□□ -1.45
HERC1-203ENST00000558532 ITPKCQ96DU7 683 aa6□□□□□ -1.45
HERC1-203ENST00000558532 PCDHB9Q9Y5E1 797 aa6□□□□□ -1.45
HERC1-203ENST00000558532 WDR4P57081 412 aaKnown RBP5.99□□□□□ -1.45
HERC1-203ENST00000558532 CCDC116Q8IYX3 515 aa5.99□□□□□ -1.45
HERC1-203ENST00000558532 ZFAND3Q9H8U3 227 aa5.99□□□□□ -1.45
HERC1-203ENST00000558532 PRM3Q9NNZ6 103 aa5.99□□□□□ -1.45
HERC1-203ENST00000558532 CAPN5O15484 640 aaPredicted RBP5.98□□□□□ -1.45
HERC1-203ENST00000558532 ZIC2O95409 532 aaPredicted RBP5.98□□□□□ -1.45
HERC1-203ENST00000558532 BMP1P13497 986 aa5.98□□□□□ -1.45
HERC1-203ENST00000558532 UBTFP17480 764 aaKnown RBP5.98□□□□□ -1.45
HERC1-203ENST00000558532 VAC14Q08AM6 782 aa5.98□□□□□ -1.45
HERC1-203ENST00000558532 ATP13A2Q9NQ11 1180 aa5.98□□□□□ -1.45
HERC1-203ENST00000558532 POTECB2RU33 542 aa5.97□□□□□ -1.45
HERC1-203ENST00000558532 PPP1R26Q5T8A7 1209 aaPredicted RBP5.97□□□□□ -1.45
HERC1-203ENST00000558532 TRIM46Q7Z4K8 759 aa5.97□□□□□ -1.45
HERC1-203ENST00000558532 ERVH48-1M5A8F1 160 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 GIGYF1O75420 1035 aaPredicted RBP5.96□□□□□ -1.46
HERC1-203ENST00000558532 RAB15P59190 212 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 SEPT12Q8IYM1 358 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 MEIOBQ8N635 442 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 CLUAP1Q96AJ1 413 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 TMPRSS4Q9NRS4 437 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 ZNF330Q9Y3S2 320 aaPredicted RBP5.96□□□□□ -1.46
HERC1-203ENST00000558532 EMILIN1Q9Y6C2 1016 aa5.96□□□□□ -1.46
HERC1-203ENST00000558532 MCCD1P59942 119 aaPredicted RBP5.95□□□□□ -1.46
HERC1-203ENST00000558532 DHX9Q08211 1270 aaKnown RBP5.95□□□□□ -1.46
HERC1-203ENST00000558532 WASHC4Q2M389 1173 aa5.95□□□□□ -1.46
HERC1-203ENST00000558532 GMPR2Q9P2T1 348 aaKnown RBP5.95□□□□□ -1.46
HERC1-203ENST00000558532 RAD21O60216 631 aa5.94□□□□□ -1.46
HERC1-203ENST00000558532 LILRA1O75019 489 aa5.94□□□□□ -1.46
HERC1-203ENST00000558532 EIF4G2P78344 907 aaKnown RBP eCLIP5.94□□□□□ -1.464e-7■■■■■ 27
HERC1-203ENST00000558532 CBLBQ13191 982 aa5.94□□□□□ -1.46
HERC1-203ENST00000558532 FNBP4Q8N3X1 1017 aaPredicted RBP5.94□□□□□ -1.46
HERC1-203ENST00000558532 ZNF784Q8NCA9 323 aaPredicted RBP5.94□□□□□ -1.46
HERC1-203ENST00000558532 CEP126Q9P2H0 1117 aa5.94□□□□□ -1.46
HERC1-203ENST00000558532 POM121CA8CG34 1229 aa5.93□□□□□ -1.46
HERC1-203ENST00000558532 MRPL14Q6P1L8 145 aaKnown RBP5.93□□□□□ -1.46
HERC1-203ENST00000558532 Q6ZVU0 165 aa5.93□□□□□ -1.46
HERC1-203ENST00000558532 ZNF592Q92610 1267 aa5.93□□□□□ -1.46
HERC1-203ENST00000558532 PGPEP1Q9NXJ5 209 aa5.93□□□□□ -1.46
HERC1-203ENST00000558532 ZNF787Q6DD87 383 aa5.92□□□□□ -1.46
HERC1-203ENST00000558532 PROSER2Q86WR7 435 aaPredicted RBP5.92□□□□□ -1.46
HERC1-203ENST00000558532 LINC00528Q8N1L1 170 aa5.92□□□□□ -1.46
HERC1-203ENST00000558532 PHTF2Q8N3S3 785 aa5.92□□□□□ -1.46
HERC1-203ENST00000558532 ADAMTS19Q8TE59 1207 aa5.92□□□□□ -1.46
HERC1-203ENST00000558532 TRIM47Q96LD4 638 aa5.92□□□□□ -1.46
HERC1-203ENST00000558532 ZFP42Q96MM3 310 aa5.92□□□□□ -1.46
HERC1-203ENST00000558532 CCDC85AQ96PX6 553 aaPredicted RBP5.92□□□□□ -1.46
HERC1-203ENST00000558532 ADD1P35611 737 aaKnown RBP5.91□□□□□ -1.46
HERC1-203ENST00000558532 SOX11P35716 441 aa5.91□□□□□ -1.46
HERC1-203ENST00000558532 RNF20Q5VTR2 975 aa5.91□□□□□ -1.46
HERC1-203ENST00000558532 KDF1Q8NAX2 398 aaPredicted RBP5.91□□□□□ -1.46
HERC1-203ENST00000558532 PURBQ96QR8 312 aaKnown RBP5.91□□□□□ -1.46
HERC1-203ENST00000558532 ALG2Q9H553 416 aa5.91□□□□□ -1.46
HERC1-203ENST00000558532 CYLDQ9NQC7 956 aa5.91□□□□□ -1.46
HERC1-203ENST00000558532 A6NJR5 290 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 SNRPBP14678 240 aaKnown RBP5.9□□□□□ -1.46
HERC1-203ENST00000558532 SCTRP47872 440 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 ERVK-9P63128 1117 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 TSGA10IPQ3SY00 556 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 AGBL1Q96MI9 1066 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 CDCA7Q9BWT1 371 aaPredicted RBP5.9□□□□□ -1.46
HERC1-203ENST00000558532 SENP2Q9HC62 589 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 CHIC2Q9UKJ5 165 aa5.9□□□□□ -1.46
HERC1-203ENST00000558532 C11orf95C9JLR9 678 aaPredicted RBP5.89□□□□□ -1.47
HERC1-203ENST00000558532 ADH1AP07327 375 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 SEMA3FQ13275 785 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 C6orf118Q5T5N4 469 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 CCDC125Q86Z20 511 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 WWC1Q8IX03 1113 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 KIFC2Q96AC6 838 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 PCDHB11Q9Y5F2 797 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 GTF3C3Q9Y5Q9 886 aa5.89□□□□□ -1.47
HERC1-203ENST00000558532 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
HERC1-203ENST00000558532 SCARF1Q14162 830 aa5.88□□□□□ -1.47
HERC1-203ENST00000558532 SLFNL1Q499Z3 407 aa5.88□□□□□ -1.47
HERC1-203ENST00000558532 CC2D2BQ6DHV5 1058 aa5.88□□□□□ -1.47
HERC1-203ENST00000558532 RNF135Q8IUD6 432 aa5.88□□□□□ -1.47
HERC1-203ENST00000558532 TSEN34Q9BSV6 310 aaKnown RBP5.88□□□□□ -1.47
HERC1-203ENST00000558532 SPINT1O43278 529 aa5.87□□□□□ -1.47
HERC1-203ENST00000558532 TRAK2O60296 914 aa5.87□□□□□ -1.47
HERC1-203ENST00000558532 BMP2P12643 396 aa5.87□□□□□ -1.47
HERC1-203ENST00000558532 OSBPL3Q9H4L5 887 aa5.87□□□□□ -1.47
HERC1-203ENST00000558532 DOLKQ9UPQ8 538 aa5.87□□□□□ -1.47
HERC1-203ENST00000558532 SOS2Q07890 1332 aaPredicted RBP5.87□□□□□ -1.47
HERC1-203ENST00000558532 NISCHQ9Y2I1 1504 aa5.86□□□□□ -1.47
HERC1-203ENST00000558532 UPP2O95045 317 aa5.86□□□□□ -1.47
HERC1-203ENST00000558532 RELBQ01201 579 aa5.86□□□□□ -1.47
HERC1-203ENST00000558532 PLPP7Q8NBV4 271 aa5.86□□□□□ -1.47
HERC1-203ENST00000558532 UCN2Q96RP3 112 aa5.86□□□□□ -1.47
HERC1-203ENST00000558532 SOBPA7XYQ1 873 aa5.85□□□□□ -1.47
HERC1-203ENST00000558532 PTGIRP43119 386 aa5.85□□□□□ -1.47
HERC1-203ENST00000558532 HDGFL1Q5TGJ6 251 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms