RNA–Protein interactions for RNA: ENST00000558438.1

TTC23-213, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 2

Gene TTC23, Length 424 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-213ENST00000558438 CCDC7Q96M83 1385 aa18.54■□□□□ 0.56
TTC23-213ENST00000558438 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
TTC23-213ENST00000558438 MTFR1LQ9H019 292 aa18.53■□□□□ 0.56
TTC23-213ENST00000558438 SLIT3O75094 1523 aa18.53■□□□□ 0.56
TTC23-213ENST00000558438 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.56
TTC23-213ENST00000558438 ARHGEF25Q86VW2 580 aa18.52■□□□□ 0.56
TTC23-213ENST00000558438 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
TTC23-213ENST00000558438 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
TTC23-213ENST00000558438 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
TTC23-213ENST00000558438 TXNRD1Q16881 649 aa18.51■□□□□ 0.55
TTC23-213ENST00000558438 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
TTC23-213ENST00000558438 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
TTC23-213ENST00000558438 CPSF1Q10570 1443 aaKnown RBP18.49■□□□□ 0.55
TTC23-213ENST00000558438 NBPF1Q3BBV0 1214 aa18.49■□□□□ 0.55
TTC23-213ENST00000558438 ABCC6O95255 1503 aa18.49■□□□□ 0.55
TTC23-213ENST00000558438 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
TTC23-213ENST00000558438 PTGER2P43116 358 aa18.48■□□□□ 0.55
TTC23-213ENST00000558438 PROM2Q8N271 834 aa18.48■□□□□ 0.55
TTC23-213ENST00000558438 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
TTC23-213ENST00000558438 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
TTC23-213ENST00000558438 ZNF784Q8NCA9 323 aaPredicted RBP18.47■□□□□ 0.55
TTC23-213ENST00000558438 SYT17Q9BSW7 474 aa18.47■□□□□ 0.55
TTC23-213ENST00000558438 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
TTC23-213ENST00000558438 MAP3K5Q99683 1374 aa18.46■□□□□ 0.55
TTC23-213ENST00000558438 AXIN2Q9Y2T1 843 aa18.46■□□□□ 0.55
TTC23-213ENST00000558438 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
TTC23-213ENST00000558438 SLC16A10Q8TF71 515 aa18.44■□□□□ 0.54
TTC23-213ENST00000558438 FHDC1Q9C0D6 1143 aaPredicted RBP18.44■□□□□ 0.54
TTC23-213ENST00000558438 CASZ1Q86V15 1759 aa18.44■□□□□ 0.54
TTC23-213ENST00000558438 ARXQ96QS3 562 aa18.43■□□□□ 0.54
TTC23-213ENST00000558438 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
TTC23-213ENST00000558438 SBF2Q86WG5 1849 aa18.43■□□□□ 0.54
TTC23-213ENST00000558438 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
TTC23-213ENST00000558438 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
TTC23-213ENST00000558438 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
TTC23-213ENST00000558438 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
TTC23-213ENST00000558438 COL18A1P39060 1754 aa18.4■□□□□ 0.54
TTC23-213ENST00000558438 IL2RBP14784 551 aa18.39■□□□□ 0.53
TTC23-213ENST00000558438 POLD1P28340 1107 aa18.39■□□□□ 0.53
TTC23-213ENST00000558438 AKAP12Q02952 1782 aa18.39■□□□□ 0.53
TTC23-213ENST00000558438 KTN1Q86UP2 1357 aaKnown RBP18.38■□□□□ 0.53
TTC23-213ENST00000558438 TRPM1Q7Z4N2 1603 aa18.38■□□□□ 0.53
TTC23-213ENST00000558438 C1QTNF8P60827 252 aa18.37■□□□□ 0.53
TTC23-213ENST00000558438 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
TTC23-213ENST00000558438 PDGFDQ9GZP0 370 aaPredicted RBP18.37■□□□□ 0.53
TTC23-213ENST00000558438 USP31Q70CQ4 1352 aa18.37■□□□□ 0.53
TTC23-213ENST00000558438 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
TTC23-213ENST00000558438 ERBB3P21860 1342 aa18.36■□□□□ 0.53
TTC23-213ENST00000558438 NLRP2Q9NX02 1062 aa18.36■□□□□ 0.53
TTC23-213ENST00000558438 GPR162Q16538 588 aa18.35■□□□□ 0.53
TTC23-213ENST00000558438 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
TTC23-213ENST00000558438 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
TTC23-213ENST00000558438 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
TTC23-213ENST00000558438 MYOM1P52179 1685 aa18.34■□□□□ 0.53
TTC23-213ENST00000558438 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.53
TTC23-213ENST00000558438 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
TTC23-213ENST00000558438 SOX12O15370 315 aa18.33■□□□□ 0.52
TTC23-213ENST00000558438 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.52
TTC23-213ENST00000558438 NFAT5O94916 1531 aa18.33■□□□□ 0.52
TTC23-213ENST00000558438 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
TTC23-213ENST00000558438 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
TTC23-213ENST00000558438 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
TTC23-213ENST00000558438 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
TTC23-213ENST00000558438 CHD4Q14839 1912 aa18.31■□□□□ 0.52
TTC23-213ENST00000558438 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
TTC23-213ENST00000558438 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
TTC23-213ENST00000558438 UTRNP46939 3433 aa18.29■□□□□ 0.52
TTC23-213ENST00000558438 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
TTC23-213ENST00000558438 ACSBG1Q96GR2 724 aa18.29■□□□□ 0.52
TTC23-213ENST00000558438 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
TTC23-213ENST00000558438 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
TTC23-213ENST00000558438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
TTC23-213ENST00000558438 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
TTC23-213ENST00000558438 IP6K1Q92551 441 aa18.25■□□□□ 0.51
TTC23-213ENST00000558438 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
TTC23-213ENST00000558438 PAPPAQ13219 1627 aa18.24■□□□□ 0.51
TTC23-213ENST00000558438 LRRC4BQ9NT99 713 aa18.24■□□□□ 0.51
TTC23-213ENST00000558438 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
TTC23-213ENST00000558438 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
TTC23-213ENST00000558438 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
TTC23-213ENST00000558438 ANKRD36BQ8N2N9 1353 aa18.22■□□□□ 0.51
TTC23-213ENST00000558438 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
TTC23-213ENST00000558438 NME9Q86XW9 330 aa18.21■□□□□ 0.51
TTC23-213ENST00000558438 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
TTC23-213ENST00000558438 RGPD5Q99666 1765 aa18.21■□□□□ 0.51
TTC23-213ENST00000558438 PNPLA7Q6ZV29 1317 aa18.2■□□□□ 0.5
TTC23-213ENST00000558438 MON2Q7Z3U7 1717 aa18.19■□□□□ 0.5
TTC23-213ENST00000558438 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
TTC23-213ENST00000558438 BTAF1O14981 1849 aa18.19■□□□□ 0.5
TTC23-213ENST00000558438 QSER1Q2KHR3 1735 aa18.18■□□□□ 0.5
TTC23-213ENST00000558438 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
TTC23-213ENST00000558438 IFFO2Q5TF58 517 aa18.18■□□□□ 0.5
TTC23-213ENST00000558438 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
TTC23-213ENST00000558438 ZCRB1Q8TBF4 217 aaKnown RBP18.18■□□□□ 0.5
TTC23-213ENST00000558438 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
TTC23-213ENST00000558438 COG3Q96JB2 828 aa18.18■□□□□ 0.5
TTC23-213ENST00000558438 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
TTC23-213ENST00000558438 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
TTC23-213ENST00000558438 USP47Q96K76 1375 aa18.17■□□□□ 0.5
TTC23-213ENST00000558438 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms