RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 TTC21AQ8NDW8 1320 aa13.76□□□□□ -0.21
PPP1R3E-202ENST00000558058 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
PPP1R3E-202ENST00000558058 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
PPP1R3E-202ENST00000558058 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 GCP02774 474 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 IL13P35225 146 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 KIF20BQ96Q89 1820 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 RIPK4P57078 832 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 OVOS2A0A0J9YW53 1432 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 MST1RQ04912 1400 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 OVOS2Q6IE36 1432 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
PPP1R3E-202ENST00000558058 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
PPP1R3E-202ENST00000558058 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
PPP1R3E-202ENST00000558058 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
PPP1R3E-202ENST00000558058 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
PPP1R3E-202ENST00000558058 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
PPP1R3E-202ENST00000558058 MON2Q7Z3U7 1717 aa13.74□□□□□ -0.21
PPP1R3E-202ENST00000558058 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
PPP1R3E-202ENST00000558058 HOXC9P31274 260 aa13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 ZMYND15Q9H091 742 aa13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 GSE1Q14687 1217 aa13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 NPHP3Q7Z494 1330 aa13.72□□□□□ -0.21
PPP1R3E-202ENST00000558058 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.21
PPP1R3E-202ENST00000558058 EYA1Q99502 592 aa13.71□□□□□ -0.21
PPP1R3E-202ENST00000558058 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
PPP1R3E-202ENST00000558058 NWD1Q149M9 1564 aa13.71□□□□□ -0.21
PPP1R3E-202ENST00000558058 SKAP1Q86WV1 359 aa13.71□□□□□ -0.21
PPP1R3E-202ENST00000558058 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.22
PPP1R3E-202ENST00000558058 USP35Q9P2H5 1018 aa13.71□□□□□ -0.22
PPP1R3E-202ENST00000558058 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
PPP1R3E-202ENST00000558058 SLC4A3P48751 1232 aa13.7□□□□□ -0.22
PPP1R3E-202ENST00000558058 RCAN3Q9UKA8 241 aa13.7□□□□□ -0.22
PPP1R3E-202ENST00000558058 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
PPP1R3E-202ENST00000558058 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 MCM10Q7L590 875 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 FLT4P35916 1363 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
PPP1R3E-202ENST00000558058 FCHSD2O94868 740 aa13.68□□□□□ -0.22
PPP1R3E-202ENST00000558058 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
PPP1R3E-202ENST00000558058 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
PPP1R3E-202ENST00000558058 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
PPP1R3E-202ENST00000558058 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
PPP1R3E-202ENST00000558058 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
PPP1R3E-202ENST00000558058 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
PPP1R3E-202ENST00000558058 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
PPP1R3E-202ENST00000558058 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 STRN4Q9NRL3 753 aa13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 BCAR3O75815 825 aa13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 ANKRD26Q9UPS8 1709 aa13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
PPP1R3E-202ENST00000558058 ZNF521Q96K83 1311 aa13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
PPP1R3E-202ENST00000558058 ANKRD24Q8TF21 1146 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 UBAP1LF5GYI3 381 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 PDE4AP27815 886 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
PPP1R3E-202ENST00000558058 SPATA31A3Q5VYP0 1347 aa13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 KIAA0232Q92628 1395 aa13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 IP6K1Q92551 441 aa13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 E9PSI1 815 aa13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 NFE2L2Q16236 605 aa13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
PPP1R3E-202ENST00000558058 EXOSC9Q06265 439 aaKnown RBP13.62□□□□□ -0.23
PPP1R3E-202ENST00000558058 CLUAP1Q96AJ1 413 aa13.62□□□□□ -0.23
PPP1R3E-202ENST00000558058 CANXP27824 592 aaKnown RBP13.61□□□□□ -0.23
PPP1R3E-202ENST00000558058 RRAGDQ9NQL2 400 aaPredicted RBP13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 DCCP43146 1447 aa13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
PPP1R3E-202ENST00000558058 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
PPP1R3E-202ENST00000558058 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
PPP1R3E-202ENST00000558058 INSRP06213 1382 aa13.59□□□□□ -0.23
PPP1R3E-202ENST00000558058 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms