RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
SHC4-204ENST00000557797 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
SHC4-204ENST00000557797 TROQ12816 1431 aaPredicted RBP11.74□□□□□ -0.53
SHC4-204ENST00000557797 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
SHC4-204ENST00000557797 A0A0G2JS52 829 aa11.72□□□□□ -0.53
SHC4-204ENST00000557797 FUT2Q10981 343 aa11.72□□□□□ -0.53
SHC4-204ENST00000557797 PARP9Q8IXQ6 854 aa11.72□□□□□ -0.53
SHC4-204ENST00000557797 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
SHC4-204ENST00000557797 IQGAP1P46940 1657 aa11.71□□□□□ -0.53
SHC4-204ENST00000557797 NPHP4O75161 1426 aaPredicted RBP11.71□□□□□ -0.53
SHC4-204ENST00000557797 ZPR1O75312 459 aa11.71□□□□□ -0.53
SHC4-204ENST00000557797 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.53
SHC4-204ENST00000557797 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
SHC4-204ENST00000557797 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
SHC4-204ENST00000557797 ANKLE2Q86XL3 938 aa11.7□□□□□ -0.54
SHC4-204ENST00000557797 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
SHC4-204ENST00000557797 CLIP1P30622 1438 aa11.69□□□□□ -0.54
SHC4-204ENST00000557797 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
SHC4-204ENST00000557797 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
SHC4-204ENST00000557797 PDE4DQ08499 809 aa11.68□□□□□ -0.54
SHC4-204ENST00000557797 MORN1Q5T089 497 aa11.68□□□□□ -0.54
SHC4-204ENST00000557797 A2MP01023 1474 aa11.68□□□□□ -0.54
SHC4-204ENST00000557797 XIRP1Q702N8 1843 aaKnown RBP11.67□□□□□ -0.54
SHC4-204ENST00000557797 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
SHC4-204ENST00000557797 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
SHC4-204ENST00000557797 TLL1O43897 1013 aa11.67□□□□□ -0.54
SHC4-204ENST00000557797 TNRQ92752 1358 aa11.67□□□□□ -0.54
SHC4-204ENST00000557797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHC4-204ENST00000557797 CDC42BPAQ5VT25 1732 aa11.66□□□□□ -0.54
SHC4-204ENST00000557797 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
SHC4-204ENST00000557797 SCUBE3Q8IX30 993 aa11.66□□□□□ -0.54
SHC4-204ENST00000557797 KDM4AO75164 1064 aa11.65□□□□□ -0.54
SHC4-204ENST00000557797 NR1I2O75469 434 aa11.65□□□□□ -0.54
SHC4-204ENST00000557797 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
SHC4-204ENST00000557797 THEMISQ8N1K5 641 aaPredicted RBP11.65□□□□□ -0.54
SHC4-204ENST00000557797 FMN1Q68DA7 1419 aa11.65□□□□□ -0.54
SHC4-204ENST00000557797 ZC3H13Q5T200 1668 aaKnown RBP11.65□□□□□ -0.55
SHC4-204ENST00000557797 PZPP20742 1482 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
SHC4-204ENST00000557797 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 UGGT1Q9NYU2 1555 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 MS4A1P11836 297 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 ADGBQ8N7X0 1667 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 FAM135AQ9P2D6 1515 aa11.64□□□□□ -0.55
SHC4-204ENST00000557797 GGT6Q6P531 493 aa11.63□□□□□ -0.55
SHC4-204ENST00000557797 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
SHC4-204ENST00000557797 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
SHC4-204ENST00000557797 HLA-CQ95604 372 aa11.62□□□□□ -0.55
SHC4-204ENST00000557797 HOXA2O43364 376 aa11.61□□□□□ -0.55
SHC4-204ENST00000557797 PPP1R18Q6NYC8 613 aa11.61□□□□□ -0.55
SHC4-204ENST00000557797 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
SHC4-204ENST00000557797 ROBO1Q9Y6N7 1651 aa11.61□□□□□ -0.55
SHC4-204ENST00000557797 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
SHC4-204ENST00000557797 USP46P62068 366 aa11.6□□□□□ -0.55
SHC4-204ENST00000557797 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
SHC4-204ENST00000557797 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
SHC4-204ENST00000557797 FBXO31Q5XUX0 539 aaPredicted RBP11.59□□□□□ -0.55
SHC4-204ENST00000557797 BEGAINQ9BUH8 593 aa11.59□□□□□ -0.55
SHC4-204ENST00000557797 CDK12Q9NYV4 1490 aaPredicted RBP11.58□□□□□ -0.56
SHC4-204ENST00000557797 ADH1BP00325 375 aa11.58□□□□□ -0.56
SHC4-204ENST00000557797 SPIRE2Q8WWL2 714 aa11.58□□□□□ -0.56
SHC4-204ENST00000557797 GRIPAP1Q4V328 841 aa11.57□□□□□ -0.56
SHC4-204ENST00000557797 ATP1B4Q9UN42 357 aaPredicted RBP11.57□□□□□ -0.56
SHC4-204ENST00000557797 GUCA2AQ02747 115 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 BRICD5Q6PL45 260 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 NUTM1Q86Y26 1132 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 SPSB2Q99619 263 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.56□□□□□ -0.56
SHC4-204ENST00000557797 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
SHC4-204ENST00000557797 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 PLEKHH2Q8IVE3 1493 aa11.56□□□□□ -0.56
SHC4-204ENST00000557797 JCADQ9P266 1359 aa11.55□□□□□ -0.56
SHC4-204ENST00000557797 PHLPP1O60346 1717 aa11.55□□□□□ -0.56
SHC4-204ENST00000557797 S1PR4O95977 384 aa11.54□□□□□ -0.56
SHC4-204ENST00000557797 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.56
SHC4-204ENST00000557797 ZNF772Q68DY9 489 aaPredicted RBP11.54□□□□□ -0.56
SHC4-204ENST00000557797 GPBP1L1Q9HC44 474 aaPredicted RBP11.54□□□□□ -0.56
SHC4-204ENST00000557797 EEA1Q15075 1411 aa11.53□□□□□ -0.56
SHC4-204ENST00000557797 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
SHC4-204ENST00000557797 RGS20O76081 388 aa11.53□□□□□ -0.56
SHC4-204ENST00000557797 FAM160A2Q8N612 972 aaPredicted RBP11.53□□□□□ -0.56
SHC4-204ENST00000557797 TRIM52Q96A61 297 aa11.53□□□□□ -0.56
SHC4-204ENST00000557797 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
SHC4-204ENST00000557797 LRP6O75581 1613 aa11.53□□□□□ -0.56
SHC4-204ENST00000557797 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.56
SHC4-204ENST00000557797 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
SHC4-204ENST00000557797 EP400Q96L91 3159 aa11.52□□□□□ -0.57
SHC4-204ENST00000557797 MAP3K1Q13233 1512 aa11.52□□□□□ -0.57
SHC4-204ENST00000557797 MOXD2PA6NHM9 499 aa11.52□□□□□ -0.57
SHC4-204ENST00000557797 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
SHC4-204ENST00000557797 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
SHC4-204ENST00000557797 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
SHC4-204ENST00000557797 COL16A1Q07092 1604 aaPredicted RBP11.52□□□□□ -0.57
SHC4-204ENST00000557797 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.57
SHC4-204ENST00000557797 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
SHC4-204ENST00000557797 NDUFV2P19404 249 aa11.51□□□□□ -0.57
SHC4-204ENST00000557797 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
SHC4-204ENST00000557797 SLC6A16Q9GZN6 736 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms