RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 PPLO60437 1756 aa12.33□□□□□ -0.44
RD3L-201ENST00000557640 C1orf167Q5SNV9 1468 aa12.33□□□□□ -0.44
RD3L-201ENST00000557640 FOXK1P85037 733 aa12.32□□□□□ -0.44
RD3L-201ENST00000557640 NUP155O75694 1391 aa12.31□□□□□ -0.44
RD3L-201ENST00000557640 BRWD3Q6RI45 1802 aa12.3□□□□□ -0.44
RD3L-201ENST00000557640 PTCH1Q13635 1447 aa12.3□□□□□ -0.44
RD3L-201ENST00000557640 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
RD3L-201ENST00000557640 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.3□□□□□ -0.44
RD3L-201ENST00000557640 ROBO2Q9HCK4 1378 aa12.3□□□□□ -0.44
RD3L-201ENST00000557640 PRAG1Q86YV5 1406 aa12.29□□□□□ -0.44
RD3L-201ENST00000557640 MYOM2P54296 1465 aa12.29□□□□□ -0.44
RD3L-201ENST00000557640 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
RD3L-201ENST00000557640 CDC42BPGQ6DT37 1551 aa12.29□□□□□ -0.44
RD3L-201ENST00000557640 RGL2O15211 777 aa12.28□□□□□ -0.44
RD3L-201ENST00000557640 HDGFP51858 240 aaKnown RBP12.28□□□□□ -0.44
RD3L-201ENST00000557640 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
RD3L-201ENST00000557640 ABCA3Q99758 1704 aa12.28□□□□□ -0.44
RD3L-201ENST00000557640 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
RD3L-201ENST00000557640 ATRNO75882 1429 aa12.28□□□□□ -0.44
RD3L-201ENST00000557640 PXDNQ92626 1479 aa12.27□□□□□ -0.44
RD3L-201ENST00000557640 RGS20O76081 388 aa12.27□□□□□ -0.45
RD3L-201ENST00000557640 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
RD3L-201ENST00000557640 GLI3P10071 1580 aa12.26□□□□□ -0.45
RD3L-201ENST00000557640 ADAMTS2O95450 1211 aa12.25□□□□□ -0.45
RD3L-201ENST00000557640 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
RD3L-201ENST00000557640 DSG2Q14126 1118 aa12.25□□□□□ -0.45
RD3L-201ENST00000557640 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
RD3L-201ENST00000557640 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
RD3L-201ENST00000557640 SOS2Q07890 1332 aaPredicted RBP12.24□□□□□ -0.45
RD3L-201ENST00000557640 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
RD3L-201ENST00000557640 ORAI2Q96SN7 254 aa12.24□□□□□ -0.45
RD3L-201ENST00000557640 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
RD3L-201ENST00000557640 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
RD3L-201ENST00000557640 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
RD3L-201ENST00000557640 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
RD3L-201ENST00000557640 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
RD3L-201ENST00000557640 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
RD3L-201ENST00000557640 ATAD2Q6PL18 1390 aa12.22□□□□□ -0.45
RD3L-201ENST00000557640 IFFO2Q5TF58 517 aa12.22□□□□□ -0.45
RD3L-201ENST00000557640 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
RD3L-201ENST00000557640 ITGAEP38570 1179 aa12.21□□□□□ -0.45
RD3L-201ENST00000557640 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.45
RD3L-201ENST00000557640 NAIPQ13075 1403 aa12.2□□□□□ -0.46
RD3L-201ENST00000557640 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
RD3L-201ENST00000557640 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
RD3L-201ENST00000557640 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
RD3L-201ENST00000557640 LRP5O75197 1615 aa12.19□□□□□ -0.46
RD3L-201ENST00000557640 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
RD3L-201ENST00000557640 WNT2BQ93097 391 aa12.18□□□□□ -0.46
RD3L-201ENST00000557640 USP21Q9UK80 565 aa12.18□□□□□ -0.46
RD3L-201ENST00000557640 HFM1A2PYH4 1435 aa12.18□□□□□ -0.46
RD3L-201ENST00000557640 NRAPQ86VF7 1730 aa12.17□□□□□ -0.46
RD3L-201ENST00000557640 SLIT2O94813 1529 aa12.17□□□□□ -0.46
RD3L-201ENST00000557640 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
RD3L-201ENST00000557640 A0A0G2JS52 829 aa12.17□□□□□ -0.46
RD3L-201ENST00000557640 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
RD3L-201ENST00000557640 XPCQ01831 940 aaPredicted RBP12.16□□□□□ -0.46
RD3L-201ENST00000557640 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
RD3L-201ENST00000557640 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
RD3L-201ENST00000557640 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
RD3L-201ENST00000557640 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
RD3L-201ENST00000557640 CRYBG1Q9Y4K1 1723 aa12.15□□□□□ -0.46
RD3L-201ENST00000557640 TECPR2O15040 1411 aa12.15□□□□□ -0.46
RD3L-201ENST00000557640 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
RD3L-201ENST00000557640 PLEKHH1Q9ULM0 1364 aa12.15□□□□□ -0.46
RD3L-201ENST00000557640 RRBP1Q9P2E9 1410 aaKnown RBP12.14□□□□□ -0.47
RD3L-201ENST00000557640 BHMG1C9JSJ3 638 aaPredicted RBP12.14□□□□□ -0.47
RD3L-201ENST00000557640 PTPREP23469 700 aa12.14□□□□□ -0.47
RD3L-201ENST00000557640 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
RD3L-201ENST00000557640 TRPM3Q9HCF6 1732 aaPredicted RBP12.13□□□□□ -0.47
RD3L-201ENST00000557640 TNS1Q9HBL0 1735 aaKnown RBP12.12□□□□□ -0.47
RD3L-201ENST00000557640 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
RD3L-201ENST00000557640 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
RD3L-201ENST00000557640 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
RD3L-201ENST00000557640 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
RD3L-201ENST00000557640 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
RD3L-201ENST00000557640 BLMP54132 1417 aaPredicted RBP12.1□□□□□ -0.47
RD3L-201ENST00000557640 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
RD3L-201ENST00000557640 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
RD3L-201ENST00000557640 FOXO3O43524 673 aa12.09□□□□□ -0.47
RD3L-201ENST00000557640 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
RD3L-201ENST00000557640 FOSBP53539 338 aa12.08□□□□□ -0.48
RD3L-201ENST00000557640 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
RD3L-201ENST00000557640 DEFB132Q7Z7B7 95 aa12.08□□□□□ -0.48
RD3L-201ENST00000557640 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
RD3L-201ENST00000557640 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
RD3L-201ENST00000557640 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
RD3L-201ENST00000557640 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
RD3L-201ENST00000557640 RGPD1P0DJD0 1748 aa12.07□□□□□ -0.48
RD3L-201ENST00000557640 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
RD3L-201ENST00000557640 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
RD3L-201ENST00000557640 ADGRB2O60241 1585 aa12.06□□□□□ -0.48
RD3L-201ENST00000557640 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
RD3L-201ENST00000557640 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
RD3L-201ENST00000557640 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
RD3L-201ENST00000557640 RPGRIP1LQ68CZ1 1315 aa12.05□□□□□ -0.48
RD3L-201ENST00000557640 UNC5CLQ8IV45 518 aa12.04□□□□□ -0.48
RD3L-201ENST00000557640 STK26Q9P289 416 aa12.04□□□□□ -0.48
RD3L-201ENST00000557640 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
RD3L-201ENST00000557640 COL14A1Q05707 1796 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms