RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
SUPT16H-207ENST00000557394 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
SUPT16H-207ENST00000557394 REREQ9P2R6 1566 aa12.97□□□□□ -0.33
SUPT16H-207ENST00000557394 ARHGEF40Q8TER5 1519 aa12.97□□□□□ -0.33
SUPT16H-207ENST00000557394 IQGAP3Q86VI3 1631 aa12.96□□□□□ -0.33
SUPT16H-207ENST00000557394 MAFGO15525 162 aa12.96□□□□□ -0.33
SUPT16H-207ENST00000557394 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-207ENST00000557394 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
SUPT16H-207ENST00000557394 GOLGA6L22H0YM25 854 aa12.96□□□□□ -0.34
SUPT16H-207ENST00000557394 SOX12O15370 315 aa12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 HDAC1Q13547 482 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 GTPBP4Q9BZE4 634 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 ATP10AO60312 1499 aa12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 MYOM1P52179 1685 aa12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 KIF20AO95235 890 aa12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 KIF2CQ99661 725 aa12.95□□□□□ -0.34
SUPT16H-207ENST00000557394 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
SUPT16H-207ENST00000557394 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SUPT16H-207ENST00000557394 IQGAP1P46940 1657 aa12.94□□□□□ -0.34
SUPT16H-207ENST00000557394 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
SUPT16H-207ENST00000557394 MROH1Q8NDA8 1641 aa12.93□□□□□ -0.34
SUPT16H-207ENST00000557394 SSFA2P28290 1259 aa12.93□□□□□ -0.34
SUPT16H-207ENST00000557394 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.345e-7■■■□□ 17.2
SUPT16H-207ENST00000557394 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
SUPT16H-207ENST00000557394 K7ELQ4 463 aaPredicted RBP12.93□□□□□ -0.34
SUPT16H-207ENST00000557394 CDCA8Q53HL2 280 aa12.93□□□□□ -0.34
SUPT16H-207ENST00000557394 VWDEQ8N2E2 1590 aa12.92□□□□□ -0.34
SUPT16H-207ENST00000557394 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
SUPT16H-207ENST00000557394 PHF14O94880 888 aa12.92□□□□□ -0.34
SUPT16H-207ENST00000557394 ZSCAN23Q3MJ62 389 aa12.92□□□□□ -0.34
SUPT16H-207ENST00000557394 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
SUPT16H-207ENST00000557394 MYRIPQ8NFW9 859 aa12.91□□□□□ -0.34
SUPT16H-207ENST00000557394 CCDC39Q9UFE4 941 aa12.91□□□□□ -0.34
SUPT16H-207ENST00000557394 AGLP35573 1532 aa12.91□□□□□ -0.34
SUPT16H-207ENST00000557394 POLR3AO14802 1390 aaPredicted RBP12.91□□□□□ -0.34
SUPT16H-207ENST00000557394 KIF3BO15066 747 aa12.91□□□□□ -0.34
SUPT16H-207ENST00000557394 LETM1O95202 739 aaPredicted RBP12.9□□□□□ -0.34
SUPT16H-207ENST00000557394 CD2BP2O95400 341 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-207ENST00000557394 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
SUPT16H-207ENST00000557394 TNNT2P45379 298 aaPredicted RBP12.9□□□□□ -0.34
SUPT16H-207ENST00000557394 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
SUPT16H-207ENST00000557394 TET3O43151 1660 aa12.89□□□□□ -0.35
SUPT16H-207ENST00000557394 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
SUPT16H-207ENST00000557394 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
SUPT16H-207ENST00000557394 HDAC5Q9UQL6 1122 aa12.89□□□□□ -0.35
SUPT16H-207ENST00000557394 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
SUPT16H-207ENST00000557394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.355e-10■■■□□ 19.1
SUPT16H-207ENST00000557394 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
SUPT16H-207ENST00000557394 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
SUPT16H-207ENST00000557394 ZNF710Q8N1W2 664 aa12.88□□□□□ -0.35
SUPT16H-207ENST00000557394 SHPRHQ149N8 1683 aa12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 SIGLEC1Q9BZZ2 1709 aa12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 PRIMPOLQ96LW4 560 aa12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 CEP152O94986 1710 aa12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
SUPT16H-207ENST00000557394 MMP14P50281 582 aa12.86□□□□□ -0.35
SUPT16H-207ENST00000557394 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
SUPT16H-207ENST00000557394 MADDQ8WXG6 1647 aa12.86□□□□□ -0.35
SUPT16H-207ENST00000557394 IRX3P78415 501 aaPredicted RBP12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 NUCB1Q02818 461 aa12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 BCL2L13Q9BXK5 485 aa12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 NUCB2P80303 420 aa12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
SUPT16H-207ENST00000557394 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 LRSAM1Q6UWE0 723 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 APPP05067 770 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 ABCC3O15438 1527 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 EFCAB6Q5THR3 1501 aa12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
SUPT16H-207ENST00000557394 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-207ENST00000557394 TAF3Q5VWG9 929 aa12.83□□□□□ -0.36
SUPT16H-207ENST00000557394 GGT6Q6P531 493 aa12.83□□□□□ -0.36
SUPT16H-207ENST00000557394 TMEM51Q9NW97 253 aa12.83□□□□□ -0.36
SUPT16H-207ENST00000557394 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
SUPT16H-207ENST00000557394 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 CBX1P83916 185 aa12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-207ENST00000557394 SPHKAPQ2M3C7 1700 aa12.81□□□□□ -0.36
SUPT16H-207ENST00000557394 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
SUPT16H-207ENST00000557394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.8□□□□□ -0.369e-8■□□□□ 10.7
SUPT16H-207ENST00000557394 TRIM27P14373 513 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms