RNA–Protein interactions for RNA: ENST00000557085.1

PSMC6-213, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-213ENST00000557085 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
PSMC6-213ENST00000557085 NOVA2Q9UNW9 492 aaKnown RBP8.89□□□□□ -0.99
PSMC6-213ENST00000557085 SLC27A5Q9Y2P5 690 aa8.89□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L5A8MUK1 530 aa8.88□□□□□ -0.99
PSMC6-213ENST00000557085 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
PSMC6-213ENST00000557085 F12P00748 615 aaPredicted RBP8.88□□□□□ -0.99
PSMC6-213ENST00000557085 ANKLE1Q8NAG6 615 aa8.88□□□□□ -0.99
PSMC6-213ENST00000557085 SLC6A16Q9GZN6 736 aa8.88□□□□□ -0.99
PSMC6-213ENST00000557085 PPEF1O14829 653 aaPredicted RBP8.87□□□□□ -0.99
PSMC6-213ENST00000557085 S1PR4O95977 384 aa8.87□□□□□ -0.99
PSMC6-213ENST00000557085 PHLDB3Q6NSJ2 640 aa8.87□□□□□ -0.99
PSMC6-213ENST00000557085 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
PSMC6-213ENST00000557085 ZNF592Q92610 1267 aa8.87□□□□□ -0.99
PSMC6-213ENST00000557085 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
PSMC6-213ENST00000557085 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
PSMC6-213ENST00000557085 FAM187AA6NFU0 413 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L12C9JPN9 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L21D6R901 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 TNFRSF10AO00220 468 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 SKIP12755 728 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
PSMC6-213ENST00000557085 USB1Q9BQ65 265 aaKnown RBP8.85□□□□□ -0.99
PSMC6-213ENST00000557085 RBM47A0AV96 593 aaKnown RBP8.84□□□□□ -0.99
PSMC6-213ENST00000557085 ERCC3P19447 782 aa8.84□□□□□ -0.99
PSMC6-213ENST00000557085 SSFA2P28290 1259 aa8.84□□□□□ -0.99
PSMC6-213ENST00000557085 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
PSMC6-213ENST00000557085 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
PSMC6-213ENST00000557085 GPSM3Q9Y4H4 160 aa8.84□□□□□ -0.99
PSMC6-213ENST00000557085 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
PSMC6-213ENST00000557085 GDF9O60383 454 aa8.83□□□□□ -1
PSMC6-213ENST00000557085 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
PSMC6-213ENST00000557085 MCCD1P59942 119 aaPredicted RBP8.83□□□□□ -1
PSMC6-213ENST00000557085 PTPRNQ16849 979 aa8.83□□□□□ -1
PSMC6-213ENST00000557085 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
PSMC6-213ENST00000557085 CLP1Q92989 425 aaKnown RBP8.83□□□□□ -1
PSMC6-213ENST00000557085 THAP11Q96EK4 314 aa8.83□□□□□ -1
PSMC6-213ENST00000557085 ATP5J2-PTCD1G3V325 749 aa8.82□□□□□ -1
PSMC6-213ENST00000557085 IGSF3O75054 1194 aa8.82□□□□□ -1
PSMC6-213ENST00000557085 FAM69CQ0P6D2 419 aa8.82□□□□□ -1
PSMC6-213ENST00000557085 PTK7Q13308 1070 aa8.82□□□□□ -1
PSMC6-213ENST00000557085 BRICD5Q6PL45 260 aa8.82□□□□□ -1
PSMC6-213ENST00000557085 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
PSMC6-213ENST00000557085 TREML4Q6UXN2 200 aa8.81□□□□□ -1
PSMC6-213ENST00000557085 GPKOWQ92917 476 aaPredicted RBP eCLIP8.81□□□□□ -1
PSMC6-213ENST00000557085 MAP10Q9P2G4 905 aa8.81□□□□□ -1
PSMC6-213ENST00000557085 ST8SIA5O15466 376 aa8.8□□□□□ -1
PSMC6-213ENST00000557085 JUNDP17535 347 aa8.8□□□□□ -1
PSMC6-213ENST00000557085 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
PSMC6-213ENST00000557085 DNAJC14Q6Y2X3 702 aaPredicted RBP8.8□□□□□ -1
PSMC6-213ENST00000557085 CDCA7Q9BWT1 371 aaPredicted RBP8.8□□□□□ -1
PSMC6-213ENST00000557085 SLAIN2Q9P270 581 aa8.8□□□□□ -1
PSMC6-213ENST00000557085 CEP126Q9P2H0 1117 aa8.8□□□□□ -1
PSMC6-213ENST00000557085 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
PSMC6-213ENST00000557085 RASA1P20936 1047 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 NCOA4Q13772 614 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 SLFNL1Q499Z3 407 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 MSS51Q4VC12 460 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
PSMC6-213ENST00000557085 DEPDC4Q8N2C3 294 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 PHTF2Q8N3S3 785 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 AAASQ9NRG9 546 aa8.79□□□□□ -1
PSMC6-213ENST00000557085 SOWAHDA6NJG2 315 aa8.78□□□□□ -1
PSMC6-213ENST00000557085 UNCXA6NJT0 531 aa8.78□□□□□ -1
PSMC6-213ENST00000557085 PTK2Q05397 1052 aa8.78□□□□□ -1
PSMC6-213ENST00000557085 PLA2G2CQ5R387 149 aa8.78□□□□□ -1
PSMC6-213ENST00000557085 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
PSMC6-213ENST00000557085 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
PSMC6-213ENST00000557085 ARMC2Q8NEN0 867 aa8.78□□□□□ -1
PSMC6-213ENST00000557085 MAP7D1Q3KQU3 841 aa8.77□□□□□ -1.01
PSMC6-213ENST00000557085 RNF135Q8IUD6 432 aa8.77□□□□□ -1.01
PSMC6-213ENST00000557085 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
PSMC6-213ENST00000557085 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
PSMC6-213ENST00000557085 IGSF5Q9NSI5 407 aa8.77□□□□□ -1.01
PSMC6-213ENST00000557085 C1orf216Q8TAB5 229 aa8.76□□□□□ -1.01
PSMC6-213ENST00000557085 OCSTAMPQ9BR26 566 aa8.76□□□□□ -1.01
PSMC6-213ENST00000557085 PRDM9Q9NQV7 894 aa8.76□□□□□ -1.01
PSMC6-213ENST00000557085 FCF1Q9Y324 198 aaKnown RBP8.76□□□□□ -1.01
PSMC6-213ENST00000557085 LOC105371045A0A1W2PR82 267 aa8.75□□□□□ -1.01
PSMC6-213ENST00000557085 CCNYL3P0C7X3 344 aa8.75□□□□□ -1.01
PSMC6-213ENST00000557085 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
PSMC6-213ENST00000557085 NBPF14Q5TI25 921 aa8.75□□□□□ -1.01
PSMC6-213ENST00000557085 FOXC1Q12948 553 aa8.74□□□□□ -1.01
PSMC6-213ENST00000557085 EML3Q32P44 896 aa8.74□□□□□ -1.01
PSMC6-213ENST00000557085 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
PSMC6-213ENST00000557085 EVA1BQ9NVM1 165 aa8.74□□□□□ -1.01
PSMC6-213ENST00000557085 PKD2L1Q9P0L9 805 aa8.74□□□□□ -1.01
PSMC6-213ENST00000557085 ZBTB24O43167 697 aaPredicted RBP8.73□□□□□ -1.01
PSMC6-213ENST00000557085 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
PSMC6-213ENST00000557085 CTHP32929 405 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms