RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-245ENST00000556958 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.98
ATXN3-245ENST00000556958 SBNO1A3KN83 1393 aa8.89□□□□□ -0.99
ATXN3-245ENST00000556958 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
ATXN3-245ENST00000556958 PRELPP51888 382 aa8.89□□□□□ -0.99
ATXN3-245ENST00000556958 ARXQ96QS3 562 aa8.89□□□□□ -0.99
ATXN3-245ENST00000556958 MTFR1LQ9H019 292 aa8.89□□□□□ -0.99
ATXN3-245ENST00000556958 TNS3Q68CZ2 1445 aa8.88□□□□□ -0.99
ATXN3-245ENST00000556958 UTRNP46939 3433 aa8.88□□□□□ -0.99
ATXN3-245ENST00000556958 HOXB3P14651 431 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-245ENST00000556958 PRDM11Q9NQV5 511 aa8.88□□□□□ -0.99
ATXN3-245ENST00000556958 STK32BQ9NY57 414 aa8.88□□□□□ -0.99
ATXN3-245ENST00000556958 BRWD3Q6RI45 1802 aa8.88□□□□□ -0.99
ATXN3-245ENST00000556958 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
ATXN3-245ENST00000556958 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
ATXN3-245ENST00000556958 BARGINQ6ZT62 677 aa8.87□□□□□ -0.99
ATXN3-245ENST00000556958 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-245ENST00000556958 RGPD1P0DJD0 1748 aa8.87□□□□□ -0.99
ATXN3-245ENST00000556958 PRAG1Q86YV5 1406 aa8.87□□□□□ -0.99
ATXN3-245ENST00000556958 USP32Q8NFA0 1604 aa8.87□□□□□ -0.99
ATXN3-245ENST00000556958 GCC2Q8IWJ2 1684 aa8.86□□□□□ -0.99
ATXN3-245ENST00000556958 EVA1CP58658 441 aa8.86□□□□□ -0.99
ATXN3-245ENST00000556958 WAPLQ7Z5K2 1190 aa8.86□□□□□ -0.99
ATXN3-245ENST00000556958 TNS4Q8IZW8 715 aa8.86□□□□□ -0.99
ATXN3-245ENST00000556958 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-245ENST00000556958 ANO8Q9HCE9 1232 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-245ENST00000556958 RPGRIP1LQ68CZ1 1315 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 APLP1P51693 650 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 STRN4Q9NRL3 753 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 NAIPQ13075 1403 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 RRBP1Q9P2E9 1410 aaKnown RBP8.85□□□□□ -0.99
ATXN3-245ENST00000556958 NUP155O75694 1391 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
ATXN3-245ENST00000556958 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-245ENST00000556958 SLC15A2Q16348 729 aa8.84□□□□□ -0.99
ATXN3-245ENST00000556958 COL13A1Q5TAT6 717 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-245ENST00000556958 NALCNQ8IZF0 1738 aa8.84□□□□□ -0.99
ATXN3-245ENST00000556958 STK26Q9P289 416 aa8.84□□□□□ -0.99
ATXN3-245ENST00000556958 MKRN3Q13064 507 aaKnown RBP8.83□□□□□ -1
ATXN3-245ENST00000556958 TCP11L2Q8N4U5 519 aa8.83□□□□□ -1
ATXN3-245ENST00000556958 THRAP3Q9Y2W1 955 aaKnown RBP8.83□□□□□ -1
ATXN3-245ENST00000556958 NRXN3Q9Y4C0 1643 aa8.83□□□□□ -1
ATXN3-245ENST00000556958 MARF1Q9Y4F3 1742 aaKnown RBP8.83□□□□□ -1
ATXN3-245ENST00000556958 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
ATXN3-245ENST00000556958 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
ATXN3-245ENST00000556958 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
ATXN3-245ENST00000556958 CDC42BPGQ6DT37 1551 aa8.82□□□□□ -1
ATXN3-245ENST00000556958 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
ATXN3-245ENST00000556958 ERBB3P21860 1342 aa8.81□□□□□ -1
ATXN3-245ENST00000556958 NEXMIFQ5QGS0 1516 aa8.81□□□□□ -1
ATXN3-245ENST00000556958 NWD2Q9ULI1 1742 aa8.81□□□□□ -1
ATXN3-245ENST00000556958 POLD1P28340 1107 aa8.81□□□□□ -1
ATXN3-245ENST00000556958 VASPP50552 380 aaPredicted RBP8.81□□□□□ -1
ATXN3-245ENST00000556958 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
ATXN3-245ENST00000556958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.81□□□□□ -13e-6■■□□□ 13.5
ATXN3-245ENST00000556958 GPRASP1Q5JY77 1395 aa8.81□□□□□ -1
ATXN3-245ENST00000556958 DLC1Q96QB1 1528 aa8.8□□□□□ -1
ATXN3-245ENST00000556958 KLHL34Q8N239 644 aa8.8□□□□□ -1
ATXN3-245ENST00000556958 DNAJC5GQ8N7S2 189 aa8.8□□□□□ -1
ATXN3-245ENST00000556958 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
ATXN3-245ENST00000556958 SIRT1Q96EB6 747 aa8.8□□□□□ -1
ATXN3-245ENST00000556958 NRKQ7Z2Y5 1582 aa8.8□□□□□ -1
ATXN3-245ENST00000556958 ABCC11Q96J66 1382 aa8.79□□□□□ -1
ATXN3-245ENST00000556958 GOLGA2Q08379 1002 aa8.79□□□□□ -1
ATXN3-245ENST00000556958 CHRNA2Q15822 529 aa8.79□□□□□ -1
ATXN3-245ENST00000556958 TXNRD1Q16881 649 aa8.79□□□□□ -1
ATXN3-245ENST00000556958 MYO5BQ9ULV0 1848 aa8.79□□□□□ -1
ATXN3-245ENST00000556958 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
ATXN3-245ENST00000556958 ATP10DQ9P241 1426 aa8.78□□□□□ -1
ATXN3-245ENST00000556958 TNS1Q9HBL0 1735 aaKnown RBP8.77□□□□□ -1
ATXN3-245ENST00000556958 AATKQ6ZMQ8 1374 aa8.77□□□□□ -1.01
ATXN3-245ENST00000556958 ZC3H6P61129 1189 aaKnown RBP8.77□□□□□ -1.01
ATXN3-245ENST00000556958 DPY19L2Q6NUT2 758 aa8.77□□□□□ -1.01
ATXN3-245ENST00000556958 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
ATXN3-245ENST00000556958 ZNF526Q8TF50 670 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-245ENST00000556958 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 DHX57Q6P158 1386 aaKnown RBP8.76□□□□□ -1.01
ATXN3-245ENST00000556958 KIAA0232Q92628 1395 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 THSD7AQ9UPZ6 1657 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 DDB1Q16531 1140 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 VARS2Q5ST30 1063 aaKnown RBP8.76□□□□□ -1.01
ATXN3-245ENST00000556958 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
ATXN3-245ENST00000556958 OVOS2A0A0G2JMS6 1433 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 OVOS2A0A0J9YW53 1432 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 TECPR2O15040 1411 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 OVOS2Q6IE36 1432 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 NRXN1Q9ULB1 1477 aa8.76□□□□□ -1.01
ATXN3-245ENST00000556958 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
ATXN3-245ENST00000556958 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
ATXN3-245ENST00000556958 NGDNQ8NEJ9 315 aaKnown RBP8.75□□□□□ -1.01
ATXN3-245ENST00000556958 WWC3Q9ULE0 1092 aa8.75□□□□□ -1.01
ATXN3-245ENST00000556958 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
ATXN3-245ENST00000556958 PLCH1Q4KWH8 1693 aa8.75□□□□□ -1.01
ATXN3-245ENST00000556958 PLEKHH1Q9ULM0 1364 aa8.74□□□□□ -1.01
ATXN3-245ENST00000556958 TOMM70O94826 608 aa8.74□□□□□ -1.01
ATXN3-245ENST00000556958 TMEM132EQ6IEE7 984 aa8.74□□□□□ -1.01
ATXN3-245ENST00000556958 RREB1Q92766 1687 aa8.74□□□□□ -1.01
ATXN3-245ENST00000556958 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
ATXN3-245ENST00000556958 KIF3CO14782 793 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms