RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 AXIN2Q9Y2T1 843 aa22.7■■□□□ 1.22
RCCD1-207ENST00000556774 WDR17Q8IZU2 1322 aa22.7■■□□□ 1.22
RCCD1-207ENST00000556774 CASZ1Q86V15 1759 aa22.69■■□□□ 1.22
RCCD1-207ENST00000556774 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
RCCD1-207ENST00000556774 NFAT5O94916 1531 aa22.68■■□□□ 1.22
RCCD1-207ENST00000556774 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
RCCD1-207ENST00000556774 TTC21BQ7Z4L5 1316 aa22.68■■□□□ 1.22
RCCD1-207ENST00000556774 SOX12O15370 315 aa22.68■■□□□ 1.22
RCCD1-207ENST00000556774 PTF1AQ7RTS3 328 aa22.67■■□□□ 1.22
RCCD1-207ENST00000556774 SPON1Q9HCB6 807 aa22.66■■□□□ 1.22
RCCD1-207ENST00000556774 ANO8Q9HCE9 1232 aaPredicted RBP22.66■■□□□ 1.22
RCCD1-207ENST00000556774 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
RCCD1-207ENST00000556774 MARCH10Q8NA82 808 aaPredicted RBP22.65■■□□□ 1.22
RCCD1-207ENST00000556774 SIN3AQ96ST3 1273 aa22.65■■□□□ 1.22
RCCD1-207ENST00000556774 PPP1R1BQ9UD71 204 aaPredicted RBP22.65■■□□□ 1.22
RCCD1-207ENST00000556774 KCNQ2O43526 872 aa22.64■■□□□ 1.21
RCCD1-207ENST00000556774 TTC21AQ8NDW8 1320 aa22.63■■□□□ 1.21
RCCD1-207ENST00000556774 PLSCR1O15162 318 aa22.63■■□□□ 1.21
RCCD1-207ENST00000556774 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
RCCD1-207ENST00000556774 KCNH5Q8NCM2 988 aa22.63■■□□□ 1.21
RCCD1-207ENST00000556774 BCL11BQ9C0K0 894 aaPredicted RBP22.63■■□□□ 1.21
RCCD1-207ENST00000556774 ABCC6O95255 1503 aa22.62■■□□□ 1.21
RCCD1-207ENST00000556774 ZNF692Q9BU19 519 aaPredicted RBP22.62■■□□□ 1.21
RCCD1-207ENST00000556774 BCL9O00512 1426 aa22.62■■□□□ 1.21
RCCD1-207ENST00000556774 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
RCCD1-207ENST00000556774 USP54Q70EL1 1684 aa22.62■■□□□ 1.21
RCCD1-207ENST00000556774 CDCA7Q9BWT1 371 aaPredicted RBP22.61■■□□□ 1.21
RCCD1-207ENST00000556774 CARD10Q9BWT7 1032 aa22.61■■□□□ 1.21
RCCD1-207ENST00000556774 NINLQ9Y2I6 1382 aa22.61■■□□□ 1.21
RCCD1-207ENST00000556774 LTN1O94822 1766 aa22.61■■□□□ 1.21
RCCD1-207ENST00000556774 NEUROD1Q13562 356 aa22.6■■□□□ 1.21
RCCD1-207ENST00000556774 MYOM1P52179 1685 aa22.59■■□□□ 1.21
RCCD1-207ENST00000556774 TNS2Q63HR2 1409 aa22.59■■□□□ 1.21
RCCD1-207ENST00000556774 YY1P25490 414 aa22.59■■□□□ 1.21
RCCD1-207ENST00000556774 NHSQ6T4R5 1651 aa22.58■■□□□ 1.21
RCCD1-207ENST00000556774 PROM2Q8N271 834 aa22.57■■□□□ 1.2
RCCD1-207ENST00000556774 PDGFDQ9GZP0 370 aaPredicted RBP22.57■■□□□ 1.2
RCCD1-207ENST00000556774 CCDC7Q96M83 1385 aa22.57■■□□□ 1.2
RCCD1-207ENST00000556774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.55■■□□□ 1.2
RCCD1-207ENST00000556774 CD163L1Q9NR16 1453 aa22.54■■□□□ 1.2
RCCD1-207ENST00000556774 EXOC5O00471 708 aa22.54■■□□□ 1.2
RCCD1-207ENST00000556774 ZBTB7AO95365 584 aa22.53■■□□□ 1.2
RCCD1-207ENST00000556774 SBNO2Q9Y2G9 1366 aa22.52■■□□□ 1.2
RCCD1-207ENST00000556774 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
RCCD1-207ENST00000556774 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
RCCD1-207ENST00000556774 NME9Q86XW9 330 aa22.51■■□□□ 1.19
RCCD1-207ENST00000556774 BTAF1O14981 1849 aa22.51■■□□□ 1.19
RCCD1-207ENST00000556774 ERBB3P21860 1342 aa22.51■■□□□ 1.19
RCCD1-207ENST00000556774 STK32BQ9NY57 414 aa22.5■■□□□ 1.19
RCCD1-207ENST00000556774 KAT6BQ8WYB5 2073 aa22.5■■□□□ 1.19
RCCD1-207ENST00000556774 PAPPAQ13219 1627 aa22.49■■□□□ 1.19
RCCD1-207ENST00000556774 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
RCCD1-207ENST00000556774 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
RCCD1-207ENST00000556774 NLRP2Q9NX02 1062 aa22.48■■□□□ 1.19
RCCD1-207ENST00000556774 PTGER2P43116 358 aa22.47■■□□□ 1.19
RCCD1-207ENST00000556774 SLC15A2Q16348 729 aa22.47■■□□□ 1.19
RCCD1-207ENST00000556774 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
RCCD1-207ENST00000556774 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
RCCD1-207ENST00000556774 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
RCCD1-207ENST00000556774 EDC4Q6P2E9 1401 aaKnown RBP22.46■■□□□ 1.19
RCCD1-207ENST00000556774 IL2RBP14784 551 aa22.44■■□□□ 1.18
RCCD1-207ENST00000556774 HDGFL2Q7Z4V5 671 aaPredicted RBP22.44■■□□□ 1.18
RCCD1-207ENST00000556774 ANKRD24Q8TF21 1146 aa22.44■■□□□ 1.18
RCCD1-207ENST00000556774 FAM208AQ9UK61 1670 aaKnown RBP22.44■■□□□ 1.18
RCCD1-207ENST00000556774 A0A1W2PP64 1363 aa22.43■■□□□ 1.18
RCCD1-207ENST00000556774 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
RCCD1-207ENST00000556774 UTRNP46939 3433 aa22.42■■□□□ 1.18
RCCD1-207ENST00000556774 MTFR1LQ9H019 292 aa22.4■■□□□ 1.18
RCCD1-207ENST00000556774 FHDC1Q9C0D6 1143 aaPredicted RBP22.39■■□□□ 1.17
RCCD1-207ENST00000556774 RGPD2P0DJD1 1756 aa22.38■■□□□ 1.17
RCCD1-207ENST00000556774 DOT1LQ8TEK3 1739 aa22.37■■□□□ 1.17
RCCD1-207ENST00000556774 SGIP1Q9BQI5 828 aa22.37■■□□□ 1.17
RCCD1-207ENST00000556774 TERF2IPQ9NYB0 399 aa22.37■■□□□ 1.17
RCCD1-207ENST00000556774 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 CHD4Q14839 1912 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 ZNF827Q17R98 1081 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 SYT17Q9BSW7 474 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 QSER1Q2KHR3 1735 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 SHANK3Q9BYB0 1731 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
RCCD1-207ENST00000556774 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
RCCD1-207ENST00000556774 LRRC4BQ9NT99 713 aa22.34■■□□□ 1.17
RCCD1-207ENST00000556774 IP6K1Q92551 441 aa22.32■■□□□ 1.16
RCCD1-207ENST00000556774 DDX54Q8TDD1 881 aaKnown RBP22.31■■□□□ 1.16
RCCD1-207ENST00000556774 ARXQ96QS3 562 aa22.31■■□□□ 1.16
RCCD1-207ENST00000556774 PUS7Q96PZ0 661 aaKnown RBP22.3■■□□□ 1.16
RCCD1-207ENST00000556774 LY75O60449 1722 aa22.3■■□□□ 1.16
RCCD1-207ENST00000556774 COL24A1Q17RW2 1714 aa22.29■■□□□ 1.16
RCCD1-207ENST00000556774 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
RCCD1-207ENST00000556774 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
RCCD1-207ENST00000556774 ZNF784Q8NCA9 323 aaPredicted RBP22.28■■□□□ 1.16
RCCD1-207ENST00000556774 TESK2Q96S53 571 aa22.28■■□□□ 1.16
RCCD1-207ENST00000556774 MEGF6O75095 1541 aa22.27■■□□□ 1.16
RCCD1-207ENST00000556774 AKT1S1Q96B36 256 aa22.27■■□□□ 1.16
RCCD1-207ENST00000556774 COG3Q96JB2 828 aa22.27■■□□□ 1.16
RCCD1-207ENST00000556774 FBLN1P23142 703 aa22.26■■□□□ 1.15
RCCD1-207ENST00000556774 HOXC9P31274 260 aa22.26■■□□□ 1.15
RCCD1-207ENST00000556774 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
RCCD1-207ENST00000556774 NSD2O96028 1365 aa22.25■■□□□ 1.15
RCCD1-207ENST00000556774 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms