RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
PCNX1-212ENST00000556516 PKD2L1Q9P0L9 805 aa8.89□□□□□ -0.99
PCNX1-212ENST00000556516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-212ENST00000556516 ZNF598Q86UK7 904 aaKnown RBP8.88□□□□□ -0.99
PCNX1-212ENST00000556516 TRMT44Q8IYL2 757 aaKnown RBP8.88□□□□□ -0.99
PCNX1-212ENST00000556516 CCDC85AQ96PX6 553 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-212ENST00000556516 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-212ENST00000556516 MAFBQ9Y5Q3 323 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-212ENST00000556516 WNT7AO00755 349 aa8.87□□□□□ -0.99
PCNX1-212ENST00000556516 SIAH2O43255 324 aa8.87□□□□□ -0.99
PCNX1-212ENST00000556516 ATP9BO43861 1147 aa8.87□□□□□ -0.99
PCNX1-212ENST00000556516 FSHRP23945 695 aa8.87□□□□□ -0.99
PCNX1-212ENST00000556516 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
PCNX1-212ENST00000556516 CDCA7Q9BWT1 371 aaPredicted RBP8.86□□□□□ -0.99
PCNX1-212ENST00000556516 USP17L5A8MUK1 530 aa8.85□□□□□ -0.99
PCNX1-212ENST00000556516 ALDH1A1P00352 501 aa8.85□□□□□ -0.99
PCNX1-212ENST00000556516 NBPF20Q3BBV1 942 aa8.85□□□□□ -0.99
PCNX1-212ENST00000556516 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
PCNX1-212ENST00000556516 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
PCNX1-212ENST00000556516 V9GY48 417 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-212ENST00000556516 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 GRM5P41594 1212 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 TMPRSS4Q9NRS4 437 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 PCDHB11Q9Y5F2 797 aa8.84□□□□□ -0.99
PCNX1-212ENST00000556516 ESPNB1AK53 854 aa8.83□□□□□ -1
PCNX1-212ENST00000556516 J3QL48 77 aa8.83□□□□□ -1
PCNX1-212ENST00000556516 NR3C2P08235 984 aa8.83□□□□□ -1
PCNX1-212ENST00000556516 NCOA4Q13772 614 aa8.83□□□□□ -1
PCNX1-212ENST00000556516 TRIM67Q6ZTA4 783 aa8.83□□□□□ -1
PCNX1-212ENST00000556516 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
PCNX1-212ENST00000556516 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
PCNX1-212ENST00000556516 GDF9O60383 454 aa8.82□□□□□ -1
PCNX1-212ENST00000556516 MCCD1P59942 119 aaPredicted RBP8.82□□□□□ -1
PCNX1-212ENST00000556516 TRAF7Q6Q0C0 670 aa8.82□□□□□ -1
PCNX1-212ENST00000556516 CDK15Q96Q40 435 aa8.82□□□□□ -1
PCNX1-212ENST00000556516 MAP4K5Q9Y4K4 846 aa8.82□□□□□ -1
PCNX1-212ENST00000556516 ADH1CP00326 375 aa8.81□□□□□ -1
PCNX1-212ENST00000556516 ZNF592Q92610 1267 aa8.81□□□□□ -1
PCNX1-212ENST00000556516 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
PCNX1-212ENST00000556516 SCTRP47872 440 aa8.8□□□□□ -1
PCNX1-212ENST00000556516 CYLDQ9NQC7 956 aa8.8□□□□□ -1
PCNX1-212ENST00000556516 CDV3Q9UKY7 258 aaKnown RBP8.8□□□□□ -1
PCNX1-212ENST00000556516 NISCHQ9Y2I1 1504 aa8.8□□□□□ -1
PCNX1-212ENST00000556516 SRPK2P78362 688 aaKnown RBP8.79□□□□□ -1
PCNX1-212ENST00000556516 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
PCNX1-212ENST00000556516 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
PCNX1-212ENST00000556516 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
PCNX1-212ENST00000556516 NNTQ13423 1086 aa8.78□□□□□ -1
PCNX1-212ENST00000556516 CYP4X1Q8N118 509 aa8.78□□□□□ -1
PCNX1-212ENST00000556516 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
PCNX1-212ENST00000556516 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
PCNX1-212ENST00000556516 MKRN1Q9UHC7 482 aaKnown RBP8.78□□□□□ -1
PCNX1-212ENST00000556516 CARNS1A5YM72 827 aa8.77□□□□□ -1.01
PCNX1-212ENST00000556516 EML3Q32P44 896 aa8.77□□□□□ -1.01
PCNX1-212ENST00000556516 KANK4Q5T7N3 995 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-212ENST00000556516 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-212ENST00000556516 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
PCNX1-212ENST00000556516 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
PCNX1-212ENST00000556516 CCDC116Q8IYX3 515 aa8.77□□□□□ -1.01
PCNX1-212ENST00000556516 ZNF784Q8NCA9 323 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-212ENST00000556516 STAU1O95793 577 aaKnown RBP8.76□□□□□ -1.01
PCNX1-212ENST00000556516 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
PCNX1-212ENST00000556516 SEPT12Q8IYM1 358 aa8.76□□□□□ -1.01
PCNX1-212ENST00000556516 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
PCNX1-212ENST00000556516 VRTNQ9H8Y1 702 aa8.76□□□□□ -1.01
PCNX1-212ENST00000556516 TOR4AQ9NXH8 423 aa8.76□□□□□ -1.01
PCNX1-212ENST00000556516 SMPD1P17405 629 aa8.75□□□□□ -1.01
PCNX1-212ENST00000556516 CLDN10P78369 228 aa8.75□□□□□ -1.01
PCNX1-212ENST00000556516 MAP7D1Q3KQU3 841 aa8.75□□□□□ -1.01
PCNX1-212ENST00000556516 MPNDQ8N594 471 aa8.75□□□□□ -1.01
PCNX1-212ENST00000556516 RETREG2Q8NC44 543 aa8.75□□□□□ -1.01
PCNX1-212ENST00000556516 KIAA1024Q9UPX6 916 aa8.75□□□□□ -1.01
PCNX1-212ENST00000556516 RASA1P20936 1047 aa8.74□□□□□ -1.01
PCNX1-212ENST00000556516 NR5A1Q13285 461 aa8.74□□□□□ -1.01
PCNX1-212ENST00000556516 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
PCNX1-212ENST00000556516 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
PCNX1-212ENST00000556516 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
PCNX1-212ENST00000556516 CBLBQ13191 982 aa8.73□□□□□ -1.01
PCNX1-212ENST00000556516 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
PCNX1-212ENST00000556516 HPS1Q92902 700 aa8.73□□□□□ -1.01
PCNX1-212ENST00000556516 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
PCNX1-212ENST00000556516 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L15C9J2P7 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L10C9JJH3 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L13C9JLJ4 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L12C9JPN9 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L11C9JVI0 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L21D6R901 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L18D6R9N7 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L22D6RA61 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L17D6RBQ6 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L19D6RCP7 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 USP17L20D6RJB6 530 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 LILRA1O75019 489 aa8.72□□□□□ -1.01
PCNX1-212ENST00000556516 ADD1P35611 737 aaKnown RBP8.72□□□□□ -1.01
PCNX1-212ENST00000556516 GTF2IP78347 998 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms