RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
SRP54-211ENST00000556445 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
SRP54-211ENST00000556445 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
SRP54-211ENST00000556445 TRIM46Q7Z4K8 759 aa8.96□□□□□ -0.98
SRP54-211ENST00000556445 ITPKCQ96DU7 683 aa8.96□□□□□ -0.98
SRP54-211ENST00000556445 KCTD15Q96SI1 283 aaPredicted RBP8.96□□□□□ -0.98
SRP54-211ENST00000556445 CDV3Q9UKY7 258 aaKnown RBP8.96□□□□□ -0.98
SRP54-211ENST00000556445 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.98
SRP54-211ENST00000556445 APBB1O00213 710 aa8.95□□□□□ -0.98
SRP54-211ENST00000556445 BMP1P13497 986 aa8.95□□□□□ -0.98
SRP54-211ENST00000556445 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
SRP54-211ENST00000556445 ZIC2O95409 532 aaPredicted RBP8.94□□□□□ -0.98
SRP54-211ENST00000556445 CCDC116Q8IYX3 515 aa8.94□□□□□ -0.98
SRP54-211ENST00000556445 MCM6Q14566 821 aa8.93□□□□□ -0.98
SRP54-211ENST00000556445 TMEM132AQ24JP5 1023 aa8.93□□□□□ -0.98
SRP54-211ENST00000556445 INTS6LQ5JSJ4 861 aaKnown RBP8.93□□□□□ -0.98
SRP54-211ENST00000556445 DZIP3Q86Y13 1208 aaKnown RBP8.93□□□□□ -0.98
SRP54-211ENST00000556445 TBC1D2BQ9UPU7 963 aa8.93□□□□□ -0.98
SRP54-211ENST00000556445 NR1H3Q13133 447 aa8.92□□□□□ -0.98
SRP54-211ENST00000556445 TRIM47Q96LD4 638 aa8.92□□□□□ -0.98
SRP54-211ENST00000556445 ESPNB1AK53 854 aa8.91□□□□□ -0.98
SRP54-211ENST00000556445 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
SRP54-211ENST00000556445 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
SRP54-211ENST00000556445 PPP1R26Q5T8A7 1209 aaPredicted RBP8.91□□□□□ -0.98
SRP54-211ENST00000556445 EMILIN1Q9Y6C2 1016 aa8.91□□□□□ -0.98
SRP54-211ENST00000556445 SNRPBP14678 240 aaKnown RBP8.9□□□□□ -0.98
SRP54-211ENST00000556445 IRF5Q13568 498 aa8.9□□□□□ -0.98
SRP54-211ENST00000556445 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
SRP54-211ENST00000556445 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
SRP54-211ENST00000556445 MEIOBQ8N635 442 aa8.89□□□□□ -0.99
SRP54-211ENST00000556445 PCDHB9Q9Y5E1 797 aa8.89□□□□□ -0.99
SRP54-211ENST00000556445 DHX9Q08211 1270 aaKnown RBP8.88□□□□□ -0.99
SRP54-211ENST00000556445 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
SRP54-211ENST00000556445 GDPD2Q9HCC8 539 aa8.88□□□□□ -0.99
SRP54-211ENST00000556445 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
SRP54-211ENST00000556445 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
SRP54-211ENST00000556445 DCAF1Q9Y4B6 1507 aa8.86□□□□□ -0.99
SRP54-211ENST00000556445 ERVH48-1M5A8F1 160 aa8.86□□□□□ -0.99
SRP54-211ENST00000556445 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
SRP54-211ENST00000556445 RAB15P59190 212 aa8.86□□□□□ -0.99
SRP54-211ENST00000556445 Q6ZVU0 165 aa8.86□□□□□ -0.99
SRP54-211ENST00000556445 ZNF775Q96BV0 537 aaPredicted RBP8.86□□□□□ -0.99
SRP54-211ENST00000556445 PURBQ96QR8 312 aaKnown RBP8.86□□□□□ -0.99
SRP54-211ENST00000556445 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
SRP54-211ENST00000556445 MCCD1P59942 119 aaPredicted RBP8.85□□□□□ -0.99
SRP54-211ENST00000556445 CBLBQ13191 982 aa8.85□□□□□ -0.99
SRP54-211ENST00000556445 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
SRP54-211ENST00000556445 TMPRSS4Q9NRS4 437 aa8.85□□□□□ -0.99
SRP54-211ENST00000556445 SCARF1Q14162 830 aa8.84□□□□□ -0.99
SRP54-211ENST00000556445 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
SRP54-211ENST00000556445 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
SRP54-211ENST00000556445 LILRA1O75019 489 aa8.83□□□□□ -1
SRP54-211ENST00000556445 ABL2P42684 1182 aa8.83□□□□□ -1
SRP54-211ENST00000556445 ZNF784Q8NCA9 323 aaPredicted RBP8.83□□□□□ -1
SRP54-211ENST00000556445 ZNF330Q9Y3S2 320 aaPredicted RBP8.83□□□□□ -1
SRP54-211ENST00000556445 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
SRP54-211ENST00000556445 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
SRP54-211ENST00000556445 FLIIQ13045 1269 aa8.81□□□□□ -1
SRP54-211ENST00000556445 ZNF592Q92610 1267 aa8.81□□□□□ -1
SRP54-211ENST00000556445 POM121Q96HA1 1249 aa8.81□□□□□ -1
SRP54-211ENST00000556445 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
SRP54-211ENST00000556445 UPP2O95045 317 aa8.8□□□□□ -1
SRP54-211ENST00000556445 BMP2P12643 396 aa8.8□□□□□ -1
SRP54-211ENST00000556445 RANGAP1P46060 587 aaPredicted RBP8.8□□□□□ -1
SRP54-211ENST00000556445 VAC14Q08AM6 782 aa8.8□□□□□ -1
SRP54-211ENST00000556445 CCDC125Q86Z20 511 aa8.79□□□□□ -1
SRP54-211ENST00000556445 KDF1Q8NAX2 398 aaPredicted RBP8.79□□□□□ -1
SRP54-211ENST00000556445 AGBL1Q96MI9 1066 aa8.79□□□□□ -1
SRP54-211ENST00000556445 CYLDQ9NQC7 956 aa8.79□□□□□ -1
SRP54-211ENST00000556445 CEP126Q9P2H0 1117 aa8.79□□□□□ -1
SRP54-211ENST00000556445 SPINT1O43278 529 aa8.78□□□□□ -1
SRP54-211ENST00000556445 ADH1AP07327 375 aa8.78□□□□□ -1
SRP54-211ENST00000556445 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
SRP54-211ENST00000556445 WASHC4Q2M389 1173 aa8.78□□□□□ -1
SRP54-211ENST00000556445 RNF20Q5VTR2 975 aa8.78□□□□□ -1
SRP54-211ENST00000556445 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
SRP54-211ENST00000556445 SOBPA7XYQ1 873 aa8.77□□□□□ -1.01
SRP54-211ENST00000556445 ERVK-9P63128 1117 aa8.76□□□□□ -1.01
SRP54-211ENST00000556445 RELBQ01201 579 aa8.76□□□□□ -1.01
SRP54-211ENST00000556445 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
SRP54-211ENST00000556445 PHTF2Q8N3S3 785 aa8.76□□□□□ -1.01
SRP54-211ENST00000556445 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
SRP54-211ENST00000556445 UBTFP17480 764 aaKnown RBP8.75□□□□□ -1.01
SRP54-211ENST00000556445 SCTRP47872 440 aa8.75□□□□□ -1.01
SRP54-211ENST00000556445 DNMT3LQ9UJW3 386 aa8.75□□□□□ -1.01
SRP54-211ENST00000556445 PCDHB11Q9Y5F2 797 aa8.75□□□□□ -1.01
SRP54-211ENST00000556445 MYO15BQ96JP2 1530 aa8.75□□□□□ -1.01
SRP54-211ENST00000556445 PTGIRP43119 386 aa8.74□□□□□ -1.01
SRP54-211ENST00000556445 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
SRP54-211ENST00000556445 CC2D2BQ6DHV5 1058 aa8.74□□□□□ -1.01
SRP54-211ENST00000556445 TREML4Q6UXN2 200 aa8.74□□□□□ -1.01
SRP54-211ENST00000556445 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
SRP54-211ENST00000556445 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
SRP54-211ENST00000556445 MAN1A2O60476 641 aa8.73□□□□□ -1.01
SRP54-211ENST00000556445 C14orf37Q86TY3 774 aa8.73□□□□□ -1.01
SRP54-211ENST00000556445 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
SRP54-211ENST00000556445 ZNF395Q9H8N7 513 aaPredicted RBP8.73□□□□□ -1.01
SRP54-211ENST00000556445 RAD21O60216 631 aa8.72□□□□□ -1.01
SRP54-211ENST00000556445 SOX11P35716 441 aa8.72□□□□□ -1.01
SRP54-211ENST00000556445 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms