RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 SOX12O15370 315 aa16.05■□□□□ 0.16
SLIRP-206ENST00000556375 EVA1CP58658 441 aa16.05■□□□□ 0.16
SLIRP-206ENST00000556375 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
SLIRP-206ENST00000556375 CRB1P82279 1406 aa16.04■□□□□ 0.16
SLIRP-206ENST00000556375 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
SLIRP-206ENST00000556375 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
SLIRP-206ENST00000556375 A0A0G2JS52 829 aa16.02■□□□□ 0.16
SLIRP-206ENST00000556375 MYT1Q01538 1121 aa16.02■□□□□ 0.16
SLIRP-206ENST00000556375 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
SLIRP-206ENST00000556375 COG3Q96JB2 828 aa16.01■□□□□ 0.15
SLIRP-206ENST00000556375 FAM208AQ9UK61 1670 aaKnown RBP16.01■□□□□ 0.15
SLIRP-206ENST00000556375 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
SLIRP-206ENST00000556375 ANKRD26Q9UPS8 1709 aa16■□□□□ 0.15
SLIRP-206ENST00000556375 BARGINQ6ZT62 677 aa16■□□□□ 0.15
SLIRP-206ENST00000556375 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
SLIRP-206ENST00000556375 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
SLIRP-206ENST00000556375 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
SLIRP-206ENST00000556375 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
SLIRP-206ENST00000556375 LRRC37A3O60309 1634 aa15.99■□□□□ 0.15
SLIRP-206ENST00000556375 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
SLIRP-206ENST00000556375 FYB1O15117 783 aa15.98■□□□□ 0.15
SLIRP-206ENST00000556375 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-206ENST00000556375 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
SLIRP-206ENST00000556375 RGPD1P0DJD0 1748 aa15.97■□□□□ 0.15
SLIRP-206ENST00000556375 CARD14Q9BXL6 1004 aa15.97■□□□□ 0.15
SLIRP-206ENST00000556375 ERBB3P21860 1342 aa15.96■□□□□ 0.15
SLIRP-206ENST00000556375 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
SLIRP-206ENST00000556375 GGNBP2Q9H3C7 697 aa15.96■□□□□ 0.15
SLIRP-206ENST00000556375 RTL1A6NKG5 1358 aa15.96■□□□□ 0.15
SLIRP-206ENST00000556375 CCDC125Q86Z20 511 aa15.95■□□□□ 0.14
SLIRP-206ENST00000556375 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
SLIRP-206ENST00000556375 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
SLIRP-206ENST00000556375 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
SLIRP-206ENST00000556375 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
SLIRP-206ENST00000556375 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
SLIRP-206ENST00000556375 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
SLIRP-206ENST00000556375 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
SLIRP-206ENST00000556375 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
SLIRP-206ENST00000556375 PEAK1Q9H792 1746 aa15.93■□□□□ 0.14
SLIRP-206ENST00000556375 IP6K1Q92551 441 aa15.92■□□□□ 0.14
SLIRP-206ENST00000556375 KIF7Q2M1P5 1343 aa15.92■□□□□ 0.14
SLIRP-206ENST00000556375 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
SLIRP-206ENST00000556375 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
SLIRP-206ENST00000556375 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
SLIRP-206ENST00000556375 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
SLIRP-206ENST00000556375 HOXC9P31274 260 aa15.9■□□□□ 0.14
SLIRP-206ENST00000556375 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
SLIRP-206ENST00000556375 CDCA7Q9BWT1 371 aaPredicted RBP15.9■□□□□ 0.14
SLIRP-206ENST00000556375 NSD2O96028 1365 aa15.89■□□□□ 0.13
SLIRP-206ENST00000556375 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
SLIRP-206ENST00000556375 FBLN1P23142 703 aa15.89■□□□□ 0.13
SLIRP-206ENST00000556375 AMPHP49418 695 aa15.89■□□□□ 0.13
SLIRP-206ENST00000556375 RRS1Q15050 365 aaKnown RBP15.89■□□□□ 0.13
SLIRP-206ENST00000556375 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
SLIRP-206ENST00000556375 PANK3Q9H999 370 aa15.89■□□□□ 0.13
SLIRP-206ENST00000556375 FLT4P35916 1363 aa15.88■□□□□ 0.13
SLIRP-206ENST00000556375 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
SLIRP-206ENST00000556375 NLRP2Q9NX02 1062 aa15.88■□□□□ 0.13
SLIRP-206ENST00000556375 SBF2Q86WG5 1849 aa15.88■□□□□ 0.13
SLIRP-206ENST00000556375 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
SLIRP-206ENST00000556375 SF3B2Q13435 895 aaKnown RBP15.87■□□□□ 0.13
SLIRP-206ENST00000556375 DDB1Q16531 1140 aa15.87■□□□□ 0.13
SLIRP-206ENST00000556375 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
SLIRP-206ENST00000556375 INSRP06213 1382 aa15.86■□□□□ 0.13
SLIRP-206ENST00000556375 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
SLIRP-206ENST00000556375 BCL9O00512 1426 aa15.84■□□□□ 0.13
SLIRP-206ENST00000556375 IL2RBP14784 551 aa15.83■□□□□ 0.12
SLIRP-206ENST00000556375 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
SLIRP-206ENST00000556375 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
SLIRP-206ENST00000556375 RGPD3A6NKT7 1758 aaPredicted RBP15.82■□□□□ 0.12
SLIRP-206ENST00000556375 RGPD4Q7Z3J3 1758 aa15.82■□□□□ 0.12
SLIRP-206ENST00000556375 BAG6P46379 1132 aa15.82■□□□□ 0.12
SLIRP-206ENST00000556375 DEFB132Q7Z7B7 95 aa15.82■□□□□ 0.12
SLIRP-206ENST00000556375 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
SLIRP-206ENST00000556375 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
SLIRP-206ENST00000556375 EXOC5O00471 708 aa15.81■□□□□ 0.12
SLIRP-206ENST00000556375 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
SLIRP-206ENST00000556375 NHSQ6T4R5 1651 aa15.81■□□□□ 0.12
SLIRP-206ENST00000556375 RREB1Q92766 1687 aa15.81■□□□□ 0.12
SLIRP-206ENST00000556375 MEGF6O75095 1541 aa15.8■□□□□ 0.12
SLIRP-206ENST00000556375 TRIM37O94972 964 aa15.8■□□□□ 0.12
SLIRP-206ENST00000556375 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
SLIRP-206ENST00000556375 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
SLIRP-206ENST00000556375 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
SLIRP-206ENST00000556375 POLKQ9UBT6 870 aa15.79■□□□□ 0.12
SLIRP-206ENST00000556375 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
SLIRP-206ENST00000556375 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.12
SLIRP-206ENST00000556375 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-206ENST00000556375 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-206ENST00000556375 NBPF6Q5VWK0 638 aa15.77■□□□□ 0.12
SLIRP-206ENST00000556375 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
SLIRP-206ENST00000556375 NBPF4Q96M43 638 aa15.77■□□□□ 0.12
SLIRP-206ENST00000556375 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.11
SLIRP-206ENST00000556375 PER1O15534 1290 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-206ENST00000556375 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
SLIRP-206ENST00000556375 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
SLIRP-206ENST00000556375 APBA3O96018 575 aa15.75■□□□□ 0.11
SLIRP-206ENST00000556375 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-206ENST00000556375 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
SLIRP-206ENST00000556375 BTAF1O14981 1849 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms