RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FKBPLQ9UIM3 349 aa7.47□□□□□ -1.21
ATXN3-241ENST00000556374 IRF7Q92985 503 aa7.46□□□□□ -1.22
ATXN3-241ENST00000556374 LAMC3Q9Y6N6 1575 aa7.46□□□□□ -1.22
ATXN3-241ENST00000556374 SLC24A1O60721 1099 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 UPP2O95045 317 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 BMP1P13497 986 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 CTDSPL2Q05D32 466 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 VASH1Q7L8A9 365 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-241ENST00000556374 RIMBP3CA6NJZ7 1639 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 RIMBP3BA6NNM3 1639 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 RIMBP3Q9UFD9 1639 aa7.45□□□□□ -1.22
ATXN3-241ENST00000556374 ZIC2O95409 532 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-241ENST00000556374 DHX9Q08211 1270 aaKnown RBP7.44□□□□□ -1.22
ATXN3-241ENST00000556374 ARID5BQ14865 1188 aa7.44□□□□□ -1.22
ATXN3-241ENST00000556374 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
ATXN3-241ENST00000556374 H3BM21 787 aa7.43□□□□□ -1.22
ATXN3-241ENST00000556374 PTK2Q05397 1052 aa7.43□□□□□ -1.22
ATXN3-241ENST00000556374 ERFEQ4G0M1 354 aa7.43□□□□□ -1.22
ATXN3-241ENST00000556374 CCDC116Q8IYX3 515 aa7.43□□□□□ -1.22
ATXN3-241ENST00000556374 MEIOBQ8N635 442 aa7.43□□□□□ -1.22
ATXN3-241ENST00000556374 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
ATXN3-241ENST00000556374 TSEN34Q9BSV6 310 aaKnown RBP7.43□□□□□ -1.22
ATXN3-241ENST00000556374 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
ATXN3-241ENST00000556374 NR3C2P08235 984 aa7.42□□□□□ -1.22
ATXN3-241ENST00000556374 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
ATXN3-241ENST00000556374 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
ATXN3-241ENST00000556374 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
ATXN3-241ENST00000556374 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
ATXN3-241ENST00000556374 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
ATXN3-241ENST00000556374 FSHRP23945 695 aa7.41□□□□□ -1.22
ATXN3-241ENST00000556374 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
ATXN3-241ENST00000556374 PURBQ96QR8 312 aaKnown RBP7.41□□□□□ -1.22
ATXN3-241ENST00000556374 GPBP1L1Q9HC44 474 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-241ENST00000556374 WDR62O43379 1518 aa7.41□□□□□ -1.22
ATXN3-241ENST00000556374 MAGEB6P1A0A0J9YX57 407 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 SOCS7O14512 581 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 VEGFBP49765 207 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 Q6ZVU0 165 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 ZBTB33Q86T24 672 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 PROCA1Q8NCQ7 364 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-241ENST00000556374 SLC10A4Q96EP9 437 aa7.4□□□□□ -1.22
ATXN3-241ENST00000556374 GMPRP36959 345 aa7.39□□□□□ -1.23
ATXN3-241ENST00000556374 NBPF20Q3BBV1 942 aa7.39□□□□□ -1.23
ATXN3-241ENST00000556374 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
ATXN3-241ENST00000556374 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
ATXN3-241ENST00000556374 SOS2Q07890 1332 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-241ENST00000556374 NR6A1Q15406 480 aa7.38□□□□□ -1.23
ATXN3-241ENST00000556374 ZSCAN1Q8NBB4 408 aa7.38□□□□□ -1.23
ATXN3-241ENST00000556374 KCTD15Q96SI1 283 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-241ENST00000556374 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
ATXN3-241ENST00000556374 AP1G2O75843 785 aa7.37□□□□□ -1.23
ATXN3-241ENST00000556374 RFC5P40937 340 aa7.37□□□□□ -1.23
ATXN3-241ENST00000556374 SEPT12Q8IYM1 358 aa7.37□□□□□ -1.23
ATXN3-241ENST00000556374 ZNF592Q92610 1267 aa7.37□□□□□ -1.23
ATXN3-241ENST00000556374 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-241ENST00000556374 SMARCA4P51532 1647 aa7.37□□□□□ -1.23
ATXN3-241ENST00000556374 MAN1A2O60476 641 aa7.36□□□□□ -1.23
ATXN3-241ENST00000556374 BMP2P12643 396 aa7.36□□□□□ -1.23
ATXN3-241ENST00000556374 MCCD1P59942 119 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-241ENST00000556374 PPP1R26Q5T8A7 1209 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-241ENST00000556374 USP17L8P0C7I0 530 aa7.35□□□□□ -1.23
ATXN3-241ENST00000556374 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.35□□□□□ -1.23
ATXN3-241ENST00000556374 FBXO31Q5XUX0 539 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-241ENST00000556374 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
ATXN3-241ENST00000556374 ARHGEF11O15085 1522 aa7.35□□□□□ -1.23
ATXN3-241ENST00000556374 PDS5BQ9NTI5 1447 aa7.35□□□□□ -1.23
ATXN3-241ENST00000556374 SPINT1O43278 529 aa7.34□□□□□ -1.23
ATXN3-241ENST00000556374 ADAM32Q8TC27 787 aa7.34□□□□□ -1.23
ATXN3-241ENST00000556374 OCSTAMPQ9BR26 566 aa7.34□□□□□ -1.23
ATXN3-241ENST00000556374 ATP1B4Q9UN42 357 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-241ENST00000556374 BAZ1BQ9UIG0 1483 aaKnown RBP7.34□□□□□ -1.23
ATXN3-241ENST00000556374 ESPNB1AK53 854 aa7.33□□□□□ -1.24
ATXN3-241ENST00000556374 BANK1Q8NDB2 785 aa7.33□□□□□ -1.24
ATXN3-241ENST00000556374 TTLL8A6PVC2 850 aa7.32□□□□□ -1.24
ATXN3-241ENST00000556374 INTS6LQ5JSJ4 861 aaKnown RBP7.32□□□□□ -1.24
ATXN3-241ENST00000556374 C6orf118Q5T5N4 469 aa7.32□□□□□ -1.24
ATXN3-241ENST00000556374 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
ATXN3-241ENST00000556374 APBB1O00213 710 aa7.31□□□□□ -1.24
ATXN3-241ENST00000556374 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
ATXN3-241ENST00000556374 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-241ENST00000556374 NANOS1Q8WY41 292 aaKnown RBP7.31□□□□□ -1.24
ATXN3-241ENST00000556374 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
ATXN3-241ENST00000556374 ERBB4Q15303 1308 aa7.3□□□□□ -1.24
ATXN3-241ENST00000556374 PEG3Q9GZU2 1588 aa7.3□□□□□ -1.24
ATXN3-241ENST00000556374 DZIP3Q86Y13 1208 aaKnown RBP7.3□□□□□ -1.24
ATXN3-241ENST00000556374 DNMT3LQ9UJW3 386 aa7.3□□□□□ -1.24
ATXN3-241ENST00000556374 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
ATXN3-241ENST00000556374 HMX1Q9NP08 348 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-241ENST00000556374 ZBBXA8MT70 800 aa7.28□□□□□ -1.24
ATXN3-241ENST00000556374 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
ATXN3-241ENST00000556374 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
ATXN3-241ENST00000556374 EPS8L1Q8TE68 723 aa7.28□□□□□ -1.24
ATXN3-241ENST00000556374 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-241ENST00000556374 RNF20Q5VTR2 975 aa7.27□□□□□ -1.25
ATXN3-241ENST00000556374 SOBPA7XYQ1 873 aa7.26□□□□□ -1.25
ATXN3-241ENST00000556374 ADH1AP07327 375 aa7.26□□□□□ -1.25
ATXN3-241ENST00000556374 PTSQ03393 145 aa7.26□□□□□ -1.25
ATXN3-241ENST00000556374 CBLBQ13191 982 aa7.26□□□□□ -1.25
ATXN3-241ENST00000556374 GJD4Q96KN9 370 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms