RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
SYNE2-221ENST00000556342 NUTM2GQ5VZR2 741 aa15.66■□□□□ 0.1
SYNE2-221ENST00000556342 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
SYNE2-221ENST00000556342 CDK19Q9BWU1 502 aa15.66■□□□□ 0.1
SYNE2-221ENST00000556342 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
SYNE2-221ENST00000556342 TNS1Q9HBL0 1735 aaKnown RBP15.65■□□□□ 0.1
SYNE2-221ENST00000556342 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
SYNE2-221ENST00000556342 CAMKK2Q96RR4 588 aa15.65■□□□□ 0.1
SYNE2-221ENST00000556342 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
SYNE2-221ENST00000556342 ACEP12821 1306 aa15.65■□□□□ 0.1
SYNE2-221ENST00000556342 CCDC61Q9Y6R9 512 aa15.64■□□□□ 0.09
SYNE2-221ENST00000556342 SSH2Q76I76 1423 aa15.63■□□□□ 0.09
SYNE2-221ENST00000556342 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
SYNE2-221ENST00000556342 BARGINQ6ZT62 677 aa15.63■□□□□ 0.09
SYNE2-221ENST00000556342 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
SYNE2-221ENST00000556342 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
SYNE2-221ENST00000556342 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
SYNE2-221ENST00000556342 PLEKHG3A1L390 1219 aa15.62■□□□□ 0.09
SYNE2-221ENST00000556342 APBA3O96018 575 aa15.62■□□□□ 0.09
SYNE2-221ENST00000556342 EVA1CP58658 441 aa15.62■□□□□ 0.09
SYNE2-221ENST00000556342 CPDO75976 1380 aa15.62■□□□□ 0.09
SYNE2-221ENST00000556342 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
SYNE2-221ENST00000556342 PDE3BQ13370 1112 aa15.61■□□□□ 0.09
SYNE2-221ENST00000556342 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
SYNE2-221ENST00000556342 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
SYNE2-221ENST00000556342 ABTB2Q8N961 1025 aa15.6■□□□□ 0.09
SYNE2-221ENST00000556342 PHF12Q96QT6 1004 aa15.6■□□□□ 0.09
SYNE2-221ENST00000556342 USP19O94966 1318 aa15.6■□□□□ 0.09
SYNE2-221ENST00000556342 CAMTA1Q9Y6Y1 1673 aa15.6■□□□□ 0.09
SYNE2-221ENST00000556342 IFNLR1Q8IU57 520 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-221ENST00000556342 TCP11L2Q8N4U5 519 aa15.59■□□□□ 0.09
SYNE2-221ENST00000556342 LMO7Q8WWI1 1683 aa15.57■□□□□ 0.08
SYNE2-221ENST00000556342 NLRP13Q86W25 1043 aa15.57■□□□□ 0.08
SYNE2-221ENST00000556342 THRAP3Q9Y2W1 955 aaKnown RBP15.57■□□□□ 0.08
SYNE2-221ENST00000556342 GCP02774 474 aa15.56■□□□□ 0.08
SYNE2-221ENST00000556342 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
SYNE2-221ENST00000556342 KIAA1210Q9ULL0 1709 aa15.55■□□□□ 0.08
SYNE2-221ENST00000556342 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
SYNE2-221ENST00000556342 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
SYNE2-221ENST00000556342 RREB1Q92766 1687 aa15.54■□□□□ 0.08
SYNE2-221ENST00000556342 COL5A2P05997 1499 aaPredicted RBP15.54■□□□□ 0.08
SYNE2-221ENST00000556342 SRPK2P78362 688 aaKnown RBP15.54■□□□□ 0.08
SYNE2-221ENST00000556342 NBPF14Q5TI25 921 aa15.54■□□□□ 0.08
SYNE2-221ENST00000556342 BRD4O60885 1362 aaPredicted RBP15.53■□□□□ 0.08
SYNE2-221ENST00000556342 CENPJQ9HC77 1338 aaPredicted RBP15.53■□□□□ 0.08
SYNE2-221ENST00000556342 NUP188Q5SRE5 1749 aa15.52■□□□□ 0.08
SYNE2-221ENST00000556342 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
SYNE2-221ENST00000556342 CRB1P82279 1406 aa15.51■□□□□ 0.07
SYNE2-221ENST00000556342 C11orf95C9JLR9 678 aaPredicted RBP15.51■□□□□ 0.07
SYNE2-221ENST00000556342 USP6P35125 1406 aa15.51■□□□□ 0.07
SYNE2-221ENST00000556342 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
SYNE2-221ENST00000556342 PARP4Q9UKK3 1724 aaKnown RBP15.5■□□□□ 0.07
SYNE2-221ENST00000556342 OVOS2A0A0G2JMS6 1433 aa15.5■□□□□ 0.07
SYNE2-221ENST00000556342 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
SYNE2-221ENST00000556342 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
SYNE2-221ENST00000556342 ZBTB7CA1YPR0 619 aa15.49■□□□□ 0.07
SYNE2-221ENST00000556342 GALR2O43603 387 aaPredicted RBP15.49■□□□□ 0.07
SYNE2-221ENST00000556342 NLRP6P59044 892 aa15.49■□□□□ 0.07
SYNE2-221ENST00000556342 CABP1Q9NZU7 370 aa15.49■□□□□ 0.07
SYNE2-221ENST00000556342 SLIT3O75094 1523 aa15.48■□□□□ 0.07
SYNE2-221ENST00000556342 SPOCK2Q92563 424 aa15.48■□□□□ 0.07
SYNE2-221ENST00000556342 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
SYNE2-221ENST00000556342 DDB1Q16531 1140 aa15.47■□□□□ 0.07
SYNE2-221ENST00000556342 KIF12Q96FN5 646 aa15.47■□□□□ 0.07
SYNE2-221ENST00000556342 PEAK1Q9H792 1746 aa15.46■□□□□ 0.07
SYNE2-221ENST00000556342 KCNQ2O43526 872 aa15.46■□□□□ 0.07
SYNE2-221ENST00000556342 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.07
SYNE2-221ENST00000556342 PPP1R1BQ9UD71 204 aaPredicted RBP15.46■□□□□ 0.07
SYNE2-221ENST00000556342 PLSCR1O15162 318 aa15.45■□□□□ 0.06
SYNE2-221ENST00000556342 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
SYNE2-221ENST00000556342 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
SYNE2-221ENST00000556342 QRICH2Q9H0J4 1663 aa15.44■□□□□ 0.06
SYNE2-221ENST00000556342 WDR17Q8IZU2 1322 aa15.44■□□□□ 0.06
SYNE2-221ENST00000556342 YY1P25490 414 aa15.44■□□□□ 0.06
SYNE2-221ENST00000556342 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
SYNE2-221ENST00000556342 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
SYNE2-221ENST00000556342 NINLQ9Y2I6 1382 aa15.44■□□□□ 0.06
SYNE2-221ENST00000556342 CPSF1Q10570 1443 aaKnown RBP15.43■□□□□ 0.06
SYNE2-221ENST00000556342 PTF1AQ7RTS3 328 aa15.43■□□□□ 0.06
SYNE2-221ENST00000556342 MS4A3Q96HJ5 214 aa15.43■□□□□ 0.06
SYNE2-221ENST00000556342 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-221ENST00000556342 RGPD3A6NKT7 1758 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-221ENST00000556342 RGPD4Q7Z3J3 1758 aa15.43■□□□□ 0.06
SYNE2-221ENST00000556342 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
SYNE2-221ENST00000556342 PIK3C2AO00443 1686 aa15.42■□□□□ 0.06
SYNE2-221ENST00000556342 GSE1Q14687 1217 aa15.42■□□□□ 0.06
SYNE2-221ENST00000556342 CDCA7Q9BWT1 371 aaPredicted RBP15.42■□□□□ 0.06
SYNE2-221ENST00000556342 BCL9O00512 1426 aa15.42■□□□□ 0.06
SYNE2-221ENST00000556342 COL18A1P39060 1754 aa15.41■□□□□ 0.06
SYNE2-221ENST00000556342 ARHGEF25Q86VW2 580 aa15.41■□□□□ 0.06
SYNE2-221ENST00000556342 MARCH10Q8NA82 808 aaPredicted RBP15.41■□□□□ 0.06
SYNE2-221ENST00000556342 TTC21BQ7Z4L5 1316 aa15.41■□□□□ 0.06
SYNE2-221ENST00000556342 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
SYNE2-221ENST00000556342 CARD10Q9BWT7 1032 aa15.4■□□□□ 0.06
SYNE2-221ENST00000556342 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
SYNE2-221ENST00000556342 MAP3K13O43283 966 aa15.39■□□□□ 0.05
SYNE2-221ENST00000556342 L3MBTL2Q969R5 705 aa15.39■□□□□ 0.05
SYNE2-221ENST00000556342 DCBLD2Q96PD2 775 aa15.39■□□□□ 0.05
SYNE2-221ENST00000556342 SOX12O15370 315 aa15.38■□□□□ 0.05
SYNE2-221ENST00000556342 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms