RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 MAFBQ9Y5Q3 323 aaPredicted RBP7.8□□□□□ -1.16
CDKN3-210ENST00000556305 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 SKIP12755 728 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 ZNF598Q86UK7 904 aaKnown RBP7.79□□□□□ -1.16
CDKN3-210ENST00000556305 BAP1Q92560 729 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 CEP126Q9P2H0 1117 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 STK17AQ9UEE5 414 aa7.79□□□□□ -1.16
CDKN3-210ENST00000556305 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.78□□□□□ -1.16
CDKN3-210ENST00000556305 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 LZTS3O60299 673 aaPredicted RBP7.78□□□□□ -1.16
CDKN3-210ENST00000556305 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 RNF20Q5VTR2 975 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 TBC1D9Q6ZT07 1266 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 RETREG2Q8NC44 543 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
CDKN3-210ENST00000556305 ZBTB7CA1YPR0 619 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 SH3RF1Q7Z6J0 888 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 PLEKHM2Q8IWE5 1019 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 TRIM52Q96A61 297 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 VRTNQ9H8Y1 702 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 AAASQ9NRG9 546 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 USTQ9Y2C2 406 aa7.77□□□□□ -1.17
CDKN3-210ENST00000556305 USP17L3A6NCW0 530 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 USP17L4A6NCW7 530 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 USP17L5A8MUK1 530 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 WIPF1O43516 503 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 GDF9O60383 454 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 USP17L2Q6R6M4 530 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 USP17L1Q7RTZ2 530 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
CDKN3-210ENST00000556305 FAM187AA6NFU0 413 aa7.75□□□□□ -1.17
CDKN3-210ENST00000556305 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
CDKN3-210ENST00000556305 RPIAP49247 311 aa7.75□□□□□ -1.17
CDKN3-210ENST00000556305 WNT7BP56706 349 aa7.75□□□□□ -1.17
CDKN3-210ENST00000556305 TRIM32Q13049 653 aa7.75□□□□□ -1.17
CDKN3-210ENST00000556305 ERFEQ4G0M1 354 aa7.75□□□□□ -1.17
CDKN3-210ENST00000556305 OCSTAMPQ9BR26 566 aa7.75□□□□□ -1.17
CDKN3-210ENST00000556305 PIK3CDO00329 1044 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 PPEF1O14829 653 aaPredicted RBP7.74□□□□□ -1.17
CDKN3-210ENST00000556305 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 ATG7O95352 703 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 EML3Q32P44 896 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 FAM174AQ8TBP5 190 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 FOXJ1Q92949 421 aa7.74□□□□□ -1.17
CDKN3-210ENST00000556305 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 WFS1O76024 890 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 CD2BP2O95400 341 aaKnown RBP7.73□□□□□ -1.17
CDKN3-210ENST00000556305 VARSP26640 1264 aaKnown RBP7.73□□□□□ -1.17
CDKN3-210ENST00000556305 SH3BP2P78314 561 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 TRMT44Q8IYL2 757 aaKnown RBP7.73□□□□□ -1.17
CDKN3-210ENST00000556305 SEPT12Q8IYM1 358 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 CRIPAKQ8N1N5 446 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 SIRT1Q96EB6 747 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 DOLKQ9UPQ8 538 aa7.73□□□□□ -1.17
CDKN3-210ENST00000556305 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
CDKN3-210ENST00000556305 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
CDKN3-210ENST00000556305 ZNF697Q5TEC3 545 aa7.72□□□□□ -1.17
CDKN3-210ENST00000556305 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
CDKN3-210ENST00000556305 C1QTNF2Q9BXJ5 285 aa7.72□□□□□ -1.17
CDKN3-210ENST00000556305 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
CDKN3-210ENST00000556305 NCOA4Q13772 614 aa7.71□□□□□ -1.18
CDKN3-210ENST00000556305 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
CDKN3-210ENST00000556305 LIAT1Q6ZQX7 453 aa7.71□□□□□ -1.18
CDKN3-210ENST00000556305 EHBP1Q8NDI1 1231 aa7.71□□□□□ -1.18
CDKN3-210ENST00000556305 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
CDKN3-210ENST00000556305 NOD1Q9Y239 953 aa7.71□□□□□ -1.18
CDKN3-210ENST00000556305 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
CDKN3-210ENST00000556305 FAM196BA6NMK8 535 aa7.7□□□□□ -1.18
CDKN3-210ENST00000556305 TNFRSF10AO00220 468 aa7.7□□□□□ -1.18
CDKN3-210ENST00000556305 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
CDKN3-210ENST00000556305 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
CDKN3-210ENST00000556305 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
CDKN3-210ENST00000556305 PHTF2Q8N3S3 785 aa7.7□□□□□ -1.18
CDKN3-210ENST00000556305 ESF1Q9H501 851 aaKnown RBP7.7□□□□□ -1.18
CDKN3-210ENST00000556305 GIGYF1O75420 1035 aaPredicted RBP7.69□□□□□ -1.18
CDKN3-210ENST00000556305 RASA1P20936 1047 aa7.69□□□□□ -1.18
CDKN3-210ENST00000556305 INSM1Q01101 510 aaPredicted RBP7.69□□□□□ -1.18
CDKN3-210ENST00000556305 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
CDKN3-210ENST00000556305 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
CDKN3-210ENST00000556305 VASH1Q7L8A9 365 aaPredicted RBP7.69□□□□□ -1.18
CDKN3-210ENST00000556305 MAP4K5Q9Y4K4 846 aa7.69□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L15C9J2P7 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L10C9JJH3 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L13C9JLJ4 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L12C9JPN9 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L11C9JVI0 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L21D6R901 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L18D6R9N7 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L22D6RA61 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L17D6RBQ6 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L19D6RCP7 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L20D6RJB6 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 USP17L24Q0WX57 530 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms