RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 KCNH5Q8NCM2 988 aa22.79■■□□□ 1.24
CHGA-204ENST00000556076 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
CHGA-204ENST00000556076 USP54Q70EL1 1684 aa22.78■■□□□ 1.24
CHGA-204ENST00000556076 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
CHGA-204ENST00000556076 LTN1O94822 1766 aa22.78■■□□□ 1.24
CHGA-204ENST00000556076 USP31Q70CQ4 1352 aa22.77■■□□□ 1.24
CHGA-204ENST00000556076 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
CHGA-204ENST00000556076 TERF2IPQ9NYB0 399 aa22.77■■□□□ 1.24
CHGA-204ENST00000556076 LRRC37A3O60309 1634 aa22.76■■□□□ 1.23
CHGA-204ENST00000556076 WNK3Q9BYP7 1800 aa22.76■■□□□ 1.23
CHGA-204ENST00000556076 BAG6P46379 1132 aa22.76■■□□□ 1.23
CHGA-204ENST00000556076 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
CHGA-204ENST00000556076 CSB-PGBD3P0DP91 1061 aa22.74■■□□□ 1.23
CHGA-204ENST00000556076 FAM196AQ6ZSG2 479 aa22.74■■□□□ 1.23
CHGA-204ENST00000556076 PUS7Q96PZ0 661 aaKnown RBP22.74■■□□□ 1.23
CHGA-204ENST00000556076 THRAP3Q9Y2W1 955 aaKnown RBP22.74■■□□□ 1.23
CHGA-204ENST00000556076 PSDA5PKW4 1024 aaPredicted RBP22.72■■□□□ 1.23
CHGA-204ENST00000556076 FBLN1P23142 703 aa22.72■■□□□ 1.23
CHGA-204ENST00000556076 EZH2Q15910 746 aaKnown RBP22.72■■□□□ 1.23
CHGA-204ENST00000556076 OVOS2A0A0J9YW53 1432 aa22.72■■□□□ 1.23
CHGA-204ENST00000556076 OVOS2Q6IE36 1432 aa22.72■■□□□ 1.23
CHGA-204ENST00000556076 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
CHGA-204ENST00000556076 APBA3O96018 575 aa22.69■■□□□ 1.22
CHGA-204ENST00000556076 TMF1P82094 1093 aa22.69■■□□□ 1.22
CHGA-204ENST00000556076 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
CHGA-204ENST00000556076 CARD10Q9BWT7 1032 aa22.68■■□□□ 1.22
CHGA-204ENST00000556076 DDB1Q16531 1140 aa22.67■■□□□ 1.22
CHGA-204ENST00000556076 PTF1AQ7RTS3 328 aa22.67■■□□□ 1.22
CHGA-204ENST00000556076 DISP2A7MBM2 1401 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 NINLQ9Y2I6 1382 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 CLSPNQ9HAW4 1339 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 MYOM1P52179 1685 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 MARCH10Q8NA82 808 aaPredicted RBP22.66■■□□□ 1.22
CHGA-204ENST00000556076 CAMKK2Q96RR4 588 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 ABCC6O95255 1503 aa22.66■■□□□ 1.22
CHGA-204ENST00000556076 ANKRD36BQ8N2N9 1353 aa22.65■■□□□ 1.22
CHGA-204ENST00000556076 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
CHGA-204ENST00000556076 ERBB3P21860 1342 aa22.64■■□□□ 1.22
CHGA-204ENST00000556076 ANKRD24Q8TF21 1146 aa22.64■■□□□ 1.21
CHGA-204ENST00000556076 TIMELESSQ9UNS1 1208 aa22.64■■□□□ 1.21
CHGA-204ENST00000556076 LTV1Q96GA3 475 aaPredicted RBP22.63■■□□□ 1.21
CHGA-204ENST00000556076 GGNBP2Q9H3C7 697 aa22.63■■□□□ 1.21
CHGA-204ENST00000556076 OVOS2A0A0G2JMS6 1433 aa22.63■■□□□ 1.21
CHGA-204ENST00000556076 R3HDM1Q15032 1099 aaKnown RBP22.62■■□□□ 1.21
CHGA-204ENST00000556076 COG3Q96JB2 828 aa22.62■■□□□ 1.21
CHGA-204ENST00000556076 RREB1Q92766 1687 aa22.62■■□□□ 1.21
CHGA-204ENST00000556076 MAP3K19Q56UN5 1328 aa22.6■■□□□ 1.21
CHGA-204ENST00000556076 NUP188Q5SRE5 1749 aa22.6■■□□□ 1.21
CHGA-204ENST00000556076 FYB1O15117 783 aa22.6■■□□□ 1.21
CHGA-204ENST00000556076 SLC24A1O60721 1099 aa22.6■■□□□ 1.21
CHGA-204ENST00000556076 RGPD2P0DJD1 1756 aa22.6■■□□□ 1.21
CHGA-204ENST00000556076 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
CHGA-204ENST00000556076 CARD14Q9BXL6 1004 aa22.59■■□□□ 1.21
CHGA-204ENST00000556076 CCDC7Q96M83 1385 aa22.59■■□□□ 1.21
CHGA-204ENST00000556076 RRS1Q15050 365 aaKnown RBP22.58■■□□□ 1.21
CHGA-204ENST00000556076 IP6K1Q92551 441 aa22.58■■□□□ 1.21
CHGA-204ENST00000556076 POLR3GLQ9BT43 218 aa22.57■■□□□ 1.2
CHGA-204ENST00000556076 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
CHGA-204ENST00000556076 EXOC5O00471 708 aa22.56■■□□□ 1.2
CHGA-204ENST00000556076 TNS2Q63HR2 1409 aa22.56■■□□□ 1.2
CHGA-204ENST00000556076 HOXC9P31274 260 aa22.55■■□□□ 1.2
CHGA-204ENST00000556076 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
CHGA-204ENST00000556076 AMPHP49418 695 aa22.54■■□□□ 1.2
CHGA-204ENST00000556076 NSD3Q9BZ95 1437 aa22.54■■□□□ 1.2
CHGA-204ENST00000556076 IL2RBP14784 551 aa22.53■■□□□ 1.2
CHGA-204ENST00000556076 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
CHGA-204ENST00000556076 KCNQ2O43526 872 aa22.52■■□□□ 1.2
CHGA-204ENST00000556076 ACSBG1Q96GR2 724 aa22.52■■□□□ 1.2
CHGA-204ENST00000556076 BCL11BQ9C0K0 894 aaPredicted RBP22.51■■□□□ 1.19
CHGA-204ENST00000556076 FAM208AQ9UK61 1670 aaKnown RBP22.51■■□□□ 1.19
CHGA-204ENST00000556076 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
CHGA-204ENST00000556076 LRP5O75197 1615 aa22.5■■□□□ 1.19
CHGA-204ENST00000556076 USHBP1Q8N6Y0 703 aa22.49■■□□□ 1.19
CHGA-204ENST00000556076 PROM2Q8N271 834 aa22.48■■□□□ 1.19
CHGA-204ENST00000556076 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
CHGA-204ENST00000556076 BCL9O00512 1426 aa22.48■■□□□ 1.19
CHGA-204ENST00000556076 C11orf95C9JLR9 678 aaPredicted RBP22.47■■□□□ 1.19
CHGA-204ENST00000556076 EIF4G2P78344 907 aaKnown RBP eCLIP22.47■■□□□ 1.19
CHGA-204ENST00000556076 NHSQ6T4R5 1651 aa22.46■■□□□ 1.19
CHGA-204ENST00000556076 RGPD3A6NKT7 1758 aaPredicted RBP22.46■■□□□ 1.19
CHGA-204ENST00000556076 RGPD4Q7Z3J3 1758 aa22.46■■□□□ 1.19
CHGA-204ENST00000556076 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.18
CHGA-204ENST00000556076 NBPF6Q5VWK0 638 aa22.45■■□□□ 1.18
CHGA-204ENST00000556076 DDX54Q8TDD1 881 aaKnown RBP22.45■■□□□ 1.18
CHGA-204ENST00000556076 NBPF4Q96M43 638 aa22.45■■□□□ 1.18
CHGA-204ENST00000556076 ANO8Q9HCE9 1232 aaPredicted RBP22.45■■□□□ 1.18
CHGA-204ENST00000556076 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
CHGA-204ENST00000556076 MEGF6O75095 1541 aa22.45■■□□□ 1.18
CHGA-204ENST00000556076 RTL1A6NKG5 1358 aa22.44■■□□□ 1.18
CHGA-204ENST00000556076 PLSCR1O15162 318 aa22.44■■□□□ 1.18
CHGA-204ENST00000556076 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
CHGA-204ENST00000556076 BTAF1O14981 1849 aa22.43■■□□□ 1.18
CHGA-204ENST00000556076 NBPF14Q5TI25 921 aa22.41■■□□□ 1.18
CHGA-204ENST00000556076 PPM1GO15355 546 aaPredicted RBP22.4■■□□□ 1.18
CHGA-204ENST00000556076 TXNRD1Q16881 649 aa22.4■■□□□ 1.18
CHGA-204ENST00000556076 PDGFDQ9GZP0 370 aaPredicted RBP22.4■■□□□ 1.18
CHGA-204ENST00000556076 TNNT2P45379 298 aaPredicted RBP22.39■■□□□ 1.17
CHGA-204ENST00000556076 INSRP06213 1382 aa22.38■■□□□ 1.17
CHGA-204ENST00000556076 MAP2P11137 1827 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms