RNA–Protein interactions for RNA: ENST00000556027.5

DDHD1-207, Transcript of DDHD domain containing 1, humanhuman

TSL 1 (best)

Gene DDHD1, Length 3,951 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDHD1-207ENST00000556027 COPB2P35606 906 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 FOXD4Q12950 439 aaPredicted RBP3.99□□□□□ -1.77
DDHD1-207ENST00000556027 MKRN4PQ13434 485 aaPredicted RBP3.99□□□□□ -1.77
DDHD1-207ENST00000556027 HDAC1Q13547 482 aaPredicted RBP3.99□□□□□ -1.77
DDHD1-207ENST00000556027 CCDC96Q2M329 555 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 SPDYE2Q495Y8 402 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 CADPS2Q86UW7 1296 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 PRKRIP1Q9H875 184 aaPredicted RBP3.99□□□□□ -1.77
DDHD1-207ENST00000556027 PNMA2Q9UL42 364 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 FRMD4BQ9Y2L6 1034 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 ZSCAN30Q86W11 494 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 GIPC2Q8TF65 315 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 CUX1P39880 1505 aa3.99□□□□□ -1.77
DDHD1-207ENST00000556027 TTLL12Q14166 644 aaPredicted RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 SETDB1Q15047 1291 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 NBPF1Q3BBV0 1214 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 AMOTL1Q8IY63 956 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 RBM46Q8TBY0 533 aaKnown RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 NUB1Q9Y5A7 615 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 GCC2Q8IWJ2 1684 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 CFTRP13569 1480 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 GOLGA6L3A6NEY3 463 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 TBC1D12O60347 775 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 KIF4AO95239 1232 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 SKIV2LQ15477 1246 aaKnown RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 EFCC1Q9HA90 598 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 RAI14Q9P0K7 980 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 KLHL42Q9P2K6 505 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 SWAP70Q9UH65 585 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 ZMYM4Q5VZL5 1548 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 MINK1Q8N4C8 1332 aaPredicted RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 DHX16O60231 1041 aaKnown RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 GYS2P54840 703 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 BIRC2Q13490 618 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 KANK4Q5T7N3 995 aaPredicted RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 DCAF8Q5TAQ9 597 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 ZNF280DQ6N043 979 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 ZNF662Q6ZS27 426 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 MTERF4Q7Z6M4 381 aaKnown RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 KIF2CQ99661 725 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 CDCA7Q9BWT1 371 aaPredicted RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 BSDC1Q9NW68 430 aaPredicted RBP3.98□□□□□ -1.77
DDHD1-207ENST00000556027 COG6Q9Y2V7 657 aa3.98□□□□□ -1.77
DDHD1-207ENST00000556027 TLDC2A0PJX2 215 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 TRIM6-TRIM34B2RNG4 842 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 APPP05067 770 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 MCM4P33991 863 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 CLCN6P51797 869 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 RRP1P56182 461 aaKnown RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 TERF2Q15554 542 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 SDR16C5Q8N3Y7 309 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 SGIP1Q9BQI5 828 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 LCMT1Q9UIC8 334 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 CEP83Q9Y592 693 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 PTPN23Q9H3S7 1636 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 AATKQ6ZMQ8 1374 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 UHRF1BP1LA0JNW5 1464 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 LAMC1P11047 1609 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 COQ9O75208 318 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 KCNJ4P48050 445 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 MARSP56192 900 aaKnown RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 SATB1Q01826 763 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 XPCQ01831 940 aaPredicted RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 HS1BP3Q53T59 392 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 ANKRD23Q86SG2 305 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 CCDC146Q8IYE0 955 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 MKL1Q969V6 931 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 TANGO6Q9C0B7 1094 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 MBD5Q9P267 1494 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 PPFIA4O75335 1185 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 RFX1P22670 979 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 ERCC5P28715 1186 aaPredicted RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 MAP9Q49MG5 647 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 SWT1Q5T5J6 900 aaKnown RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 KCNB2Q92953 911 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 TNPO1Q92973 898 aaKnown RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 CHPF2Q9P2E5 772 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 CTNNA3Q9UI47 895 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 GNEQ9Y223 722 aaKnown RBP3.97□□□□□ -1.77
DDHD1-207ENST00000556027 KANK1Q14678 1352 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 SBNO2Q9Y2G9 1366 aa3.97□□□□□ -1.77
DDHD1-207ENST00000556027 RAPGEF2Q9Y4G8 1499 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 KLHL33A6NCF5 533 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 U2SURPO15042 1029 aaKnown RBP3.96□□□□□ -1.77
DDHD1-207ENST00000556027 STK10O94804 968 aaKnown RBP3.96□□□□□ -1.77
DDHD1-207ENST00000556027 PAX3P23760 479 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 TATDN2Q93075 761 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 NCAPGQ9BPX3 1015 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 CUEDC1Q9NWM3 386 aaPredicted RBP3.96□□□□□ -1.77
DDHD1-207ENST00000556027 DONSONQ9NYP3 566 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 POLKQ9UBT6 870 aa3.96□□□□□ -1.77
DDHD1-207ENST00000556027 R3HCC1Q9Y3T6 440 aaKnown RBP3.96□□□□□ -1.77
DDHD1-207ENST00000556027 PBRM1Q86U86 1689 aa3.96□□□□□ -1.78
DDHD1-207ENST00000556027 TIAM1Q13009 1591 aa3.96□□□□□ -1.78
DDHD1-207ENST00000556027 NINLQ9Y2I6 1382 aa3.96□□□□□ -1.78
DDHD1-207ENST00000556027 CCDC172P0C7W6 258 aa3.96□□□□□ -1.78
DDHD1-207ENST00000556027 APLP1P51693 650 aa3.96□□□□□ -1.78
DDHD1-207ENST00000556027 SAFB2Q14151 953 aaKnown RBP eCLIP3.96□□□□□ -1.78
DDHD1-207ENST00000556027 GPT2Q8TD30 523 aa3.96□□□□□ -1.78
DDHD1-207ENST00000556027 BRINP2Q9C0B6 783 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms