RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 AXIN2Q9Y2T1 843 aa16.33■□□□□ 0.2
LRP1-209ENST00000555941 OVOS2A0A0G2JMS6 1433 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 OVOS2A0A0J9YW53 1432 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 ABCC6O95255 1503 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
LRP1-209ENST00000555941 DDB1Q16531 1140 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 OVOS2Q6IE36 1432 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 MON2Q7Z3U7 1717 aa16.32■□□□□ 0.2
LRP1-209ENST00000555941 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
LRP1-209ENST00000555941 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
LRP1-209ENST00000555941 NFAT5O94916 1531 aa16.3■□□□□ 0.2
LRP1-209ENST00000555941 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
LRP1-209ENST00000555941 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
LRP1-209ENST00000555941 RREB1Q92766 1687 aa16.3■□□□□ 0.2
LRP1-209ENST00000555941 PEAK1Q9H792 1746 aa16.29■□□□□ 0.2
LRP1-209ENST00000555941 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
LRP1-209ENST00000555941 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
LRP1-209ENST00000555941 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
LRP1-209ENST00000555941 BCL9O00512 1426 aa16.28■□□□□ 0.2
LRP1-209ENST00000555941 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
LRP1-209ENST00000555941 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
LRP1-209ENST00000555941 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
LRP1-209ENST00000555941 RGPD5Q99666 1765 aa16.28■□□□□ 0.2
LRP1-209ENST00000555941 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
LRP1-209ENST00000555941 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
LRP1-209ENST00000555941 PLSCR1O15162 318 aa16.27■□□□□ 0.2
LRP1-209ENST00000555941 SOX12O15370 315 aa16.27■□□□□ 0.2
LRP1-209ENST00000555941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.2
LRP1-209ENST00000555941 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
LRP1-209ENST00000555941 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
LRP1-209ENST00000555941 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
LRP1-209ENST00000555941 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
LRP1-209ENST00000555941 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
LRP1-209ENST00000555941 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
LRP1-209ENST00000555941 EDC4Q6P2E9 1401 aaKnown RBP16.26■□□□□ 0.19
LRP1-209ENST00000555941 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
LRP1-209ENST00000555941 EXOC5O00471 708 aa16.25■□□□□ 0.19
LRP1-209ENST00000555941 NME9Q86XW9 330 aa16.24■□□□□ 0.19
LRP1-209ENST00000555941 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
LRP1-209ENST00000555941 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
LRP1-209ENST00000555941 TESK2Q96S53 571 aa16.22■□□□□ 0.19
LRP1-209ENST00000555941 ERBB3P21860 1342 aa16.21■□□□□ 0.19
LRP1-209ENST00000555941 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
LRP1-209ENST00000555941 LTN1O94822 1766 aa16.21■□□□□ 0.18
LRP1-209ENST00000555941 ST20-MTHFSA0A0A6YYL1 179 aa16.2■□□□□ 0.18
LRP1-209ENST00000555941 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
LRP1-209ENST00000555941 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
LRP1-209ENST00000555941 IL2RBP14784 551 aa16.18■□□□□ 0.18
LRP1-209ENST00000555941 ANKRD24Q8TF21 1146 aa16.17■□□□□ 0.18
LRP1-209ENST00000555941 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
LRP1-209ENST00000555941 KCNQ2O43526 872 aa16.16■□□□□ 0.18
LRP1-209ENST00000555941 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
LRP1-209ENST00000555941 IP6K1Q92551 441 aa16.16■□□□□ 0.18
LRP1-209ENST00000555941 PROM2Q8N271 834 aa16.15■□□□□ 0.18
LRP1-209ENST00000555941 COG3Q96JB2 828 aa16.15■□□□□ 0.18
LRP1-209ENST00000555941 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
LRP1-209ENST00000555941 TMF1P82094 1093 aa16.14■□□□□ 0.17
LRP1-209ENST00000555941 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.17
LRP1-209ENST00000555941 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
LRP1-209ENST00000555941 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
LRP1-209ENST00000555941 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
LRP1-209ENST00000555941 NHSQ6T4R5 1651 aa16.13■□□□□ 0.17
LRP1-209ENST00000555941 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
LRP1-209ENST00000555941 USP47Q96K76 1375 aa16.12■□□□□ 0.17
LRP1-209ENST00000555941 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
LRP1-209ENST00000555941 STK32BQ9NY57 414 aa16.11■□□□□ 0.17
LRP1-209ENST00000555941 AMPHP49418 695 aa16.1■□□□□ 0.17
LRP1-209ENST00000555941 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
LRP1-209ENST00000555941 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
LRP1-209ENST00000555941 HOXC9P31274 260 aa16.09■□□□□ 0.17
LRP1-209ENST00000555941 SLC15A2Q16348 729 aa16.08■□□□□ 0.16
LRP1-209ENST00000555941 RTL1A6NKG5 1358 aa16.08■□□□□ 0.16
LRP1-209ENST00000555941 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
LRP1-209ENST00000555941 FYB1O15117 783 aa16.07■□□□□ 0.16
LRP1-209ENST00000555941 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
LRP1-209ENST00000555941 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
LRP1-209ENST00000555941 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
LRP1-209ENST00000555941 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
LRP1-209ENST00000555941 BTAF1O14981 1849 aa16.05■□□□□ 0.16
LRP1-209ENST00000555941 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
LRP1-209ENST00000555941 KIF24Q5T7B8 1368 aa16.04■□□□□ 0.16
LRP1-209ENST00000555941 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
LRP1-209ENST00000555941 SLC27A3Q5K4L6 730 aa16.03■□□□□ 0.16
LRP1-209ENST00000555941 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
LRP1-209ENST00000555941 PDGFDQ9GZP0 370 aaPredicted RBP16.03■□□□□ 0.16
LRP1-209ENST00000555941 MTFR1LQ9H019 292 aa16.03■□□□□ 0.16
LRP1-209ENST00000555941 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
LRP1-209ENST00000555941 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.16
LRP1-209ENST00000555941 ZBTB7AO95365 584 aa16.02■□□□□ 0.16
LRP1-209ENST00000555941 FBLN1P23142 703 aa16.02■□□□□ 0.16
LRP1-209ENST00000555941 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
LRP1-209ENST00000555941 PTGER2P43116 358 aa16.01■□□□□ 0.15
LRP1-209ENST00000555941 RRS1Q15050 365 aaKnown RBP16.01■□□□□ 0.15
LRP1-209ENST00000555941 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
LRP1-209ENST00000555941 INSRP06213 1382 aa16■□□□□ 0.15
LRP1-209ENST00000555941 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
LRP1-209ENST00000555941 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
LRP1-209ENST00000555941 NBPF4Q96M43 638 aa16■□□□□ 0.15
LRP1-209ENST00000555941 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms