RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 NEUROD1Q13562 356 aa9.75□□□□□ -0.85
SLIRP-204ENST00000555890 IDI1Q13907 227 aa9.75□□□□□ -0.85
SLIRP-204ENST00000555890 VPS72Q15906 364 aa9.75□□□□□ -0.85
SLIRP-204ENST00000555890 FAM182BQ5T319 152 aa9.75□□□□□ -0.85
SLIRP-204ENST00000555890 ADCY9O60503 1353 aa9.75□□□□□ -0.85
SLIRP-204ENST00000555890 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
SLIRP-204ENST00000555890 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
SLIRP-204ENST00000555890 CCDC9Q9Y3X0 531 aaKnown RBP9.74□□□□□ -0.85
SLIRP-204ENST00000555890 SIN3AQ96ST3 1273 aa9.73□□□□□ -0.85
SLIRP-204ENST00000555890 MPHOSPH9Q99550 1183 aa9.73□□□□□ -0.85
SLIRP-204ENST00000555890 PDGFDQ9GZP0 370 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-204ENST00000555890 DAXXQ9UER7 740 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-204ENST00000555890 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-204ENST00000555890 ANKRD50Q9ULJ7 1429 aa9.72□□□□□ -0.85
SLIRP-204ENST00000555890 CACNA1AO00555 2505 aa9.71□□□□□ -0.85
SLIRP-204ENST00000555890 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-204ENST00000555890 SLC17A8Q8NDX2 589 aa9.71□□□□□ -0.86
SLIRP-204ENST00000555890 GCC1Q96CN9 775 aa9.71□□□□□ -0.86
SLIRP-204ENST00000555890 TONSLQ96HA7 1378 aa9.71□□□□□ -0.86
SLIRP-204ENST00000555890 EFCAB6Q5THR3 1501 aa9.71□□□□□ -0.86
SLIRP-204ENST00000555890 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.86
SLIRP-204ENST00000555890 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
SLIRP-204ENST00000555890 RBM46Q8TBY0 533 aaKnown RBP9.7□□□□□ -0.86
SLIRP-204ENST00000555890 MTFR1LQ9H019 292 aa9.7□□□□□ -0.86
SLIRP-204ENST00000555890 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
SLIRP-204ENST00000555890 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
SLIRP-204ENST00000555890 FSTL1Q12841 308 aa9.69□□□□□ -0.86
SLIRP-204ENST00000555890 DIEXFQ68CQ4 756 aaKnown RBP9.69□□□□□ -0.86
SLIRP-204ENST00000555890 FAM196AQ6ZSG2 479 aa9.69□□□□□ -0.86
SLIRP-204ENST00000555890 KIF15Q9NS87 1388 aa9.69□□□□□ -0.86
SLIRP-204ENST00000555890 TNS1Q9HBL0 1735 aaKnown RBP9.68□□□□□ -0.86
SLIRP-204ENST00000555890 SLIT2O94813 1529 aa9.68□□□□□ -0.86
SLIRP-204ENST00000555890 FOXN1O15353 648 aa9.68□□□□□ -0.86
SLIRP-204ENST00000555890 CTCFP49711 727 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-204ENST00000555890 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-204ENST00000555890 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
SLIRP-204ENST00000555890 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
SLIRP-204ENST00000555890 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
SLIRP-204ENST00000555890 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
SLIRP-204ENST00000555890 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
SLIRP-204ENST00000555890 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
SLIRP-204ENST00000555890 NUP188Q5SRE5 1749 aa9.67□□□□□ -0.86
SLIRP-204ENST00000555890 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.67□□□□□ -0.86
SLIRP-204ENST00000555890 PLEKHG1Q9ULL1 1385 aa9.66□□□□□ -0.86
SLIRP-204ENST00000555890 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-204ENST00000555890 POTEJP0CG39 1038 aa9.66□□□□□ -0.86
SLIRP-204ENST00000555890 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
SLIRP-204ENST00000555890 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
SLIRP-204ENST00000555890 MYOM2P54296 1465 aa9.66□□□□□ -0.86
SLIRP-204ENST00000555890 NOS1P29475 1434 aa9.65□□□□□ -0.86
SLIRP-204ENST00000555890 NUP155O75694 1391 aa9.65□□□□□ -0.86
SLIRP-204ENST00000555890 RREB1Q92766 1687 aa9.65□□□□□ -0.86
SLIRP-204ENST00000555890 ATMINO43313 823 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-204ENST00000555890 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.87
SLIRP-204ENST00000555890 ANKRD30BQ9BXX2 1392 aa9.64□□□□□ -0.87
SLIRP-204ENST00000555890 DCCP43146 1447 aa9.64□□□□□ -0.87
SLIRP-204ENST00000555890 PTPRUQ92729 1446 aa9.64□□□□□ -0.87
SLIRP-204ENST00000555890 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
SLIRP-204ENST00000555890 CASZ1Q86V15 1759 aa9.63□□□□□ -0.87
SLIRP-204ENST00000555890 ADGRB3O60242 1522 aa9.63□□□□□ -0.87
SLIRP-204ENST00000555890 ZC3H15Q8WU90 426 aaKnown RBP9.63□□□□□ -0.87
SLIRP-204ENST00000555890 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-204ENST00000555890 MST1RQ04912 1400 aa9.63□□□□□ -0.87
SLIRP-204ENST00000555890 ERBINQ96RT1 1412 aa9.63□□□□□ -0.87
SLIRP-204ENST00000555890 RPRD2Q5VT52 1461 aaKnown RBP9.62□□□□□ -0.87
SLIRP-204ENST00000555890 CDAN1Q8IWY9 1227 aa9.62□□□□□ -0.87
SLIRP-204ENST00000555890 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-204ENST00000555890 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
SLIRP-204ENST00000555890 LMTK2Q8IWU2 1503 aa9.61□□□□□ -0.87
SLIRP-204ENST00000555890 HABP4Q5JVS0 413 aaKnown RBP9.61□□□□□ -0.87
SLIRP-204ENST00000555890 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
SLIRP-204ENST00000555890 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
SLIRP-204ENST00000555890 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
SLIRP-204ENST00000555890 E2F4Q16254 413 aa9.6□□□□□ -0.87
SLIRP-204ENST00000555890 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
SLIRP-204ENST00000555890 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
SLIRP-204ENST00000555890 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
SLIRP-204ENST00000555890 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
SLIRP-204ENST00000555890 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
SLIRP-204ENST00000555890 TMEM131LA2VDJ0 1609 aa9.58□□□□□ -0.88
SLIRP-204ENST00000555890 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
SLIRP-204ENST00000555890 LBX1P52954 281 aa9.58□□□□□ -0.88
SLIRP-204ENST00000555890 L3MBTL2Q969R5 705 aa9.58□□□□□ -0.88
SLIRP-204ENST00000555890 LAMC1P11047 1609 aa9.57□□□□□ -0.88
SLIRP-204ENST00000555890 COL22A1Q8NFW1 1626 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-204ENST00000555890 PSEN1P49768 467 aa9.57□□□□□ -0.88
SLIRP-204ENST00000555890 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
SLIRP-204ENST00000555890 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-204ENST00000555890 PCDHB8Q9UN66 801 aa9.57□□□□□ -0.88
SLIRP-204ENST00000555890 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
SLIRP-204ENST00000555890 KANK1Q14678 1352 aa9.55□□□□□ -0.88
SLIRP-204ENST00000555890 STK32BQ9NY57 414 aa9.55□□□□□ -0.88
SLIRP-204ENST00000555890 TRPM2O94759 1503 aa9.55□□□□□ -0.88
SLIRP-204ENST00000555890 SEMA3EO15041 775 aa9.54□□□□□ -0.88
SLIRP-204ENST00000555890 SLC24A3Q9HC58 644 aa9.54□□□□□ -0.88
SLIRP-204ENST00000555890 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
SLIRP-204ENST00000555890 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
SLIRP-204ENST00000555890 NLRP6P59044 892 aa9.53□□□□□ -0.88
SLIRP-204ENST00000555890 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
SLIRP-204ENST00000555890 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms