RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 TTC21AQ8NDW8 1320 aa10.62□□□□□ -0.71
PCNX4-210ENST00000555740 SHPRHQ149N8 1683 aa10.61□□□□□ -0.71
PCNX4-210ENST00000555740 ACEP12821 1306 aa10.61□□□□□ -0.71
PCNX4-210ENST00000555740 ROBO1Q9Y6N7 1651 aa10.61□□□□□ -0.71
PCNX4-210ENST00000555740 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
PCNX4-210ENST00000555740 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
PCNX4-210ENST00000555740 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
PCNX4-210ENST00000555740 ATF3P18847 181 aa10.59□□□□□ -0.71
PCNX4-210ENST00000555740 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
PCNX4-210ENST00000555740 COL22A1Q8NFW1 1626 aaPredicted RBP10.59□□□□□ -0.71
PCNX4-210ENST00000555740 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
PCNX4-210ENST00000555740 NFAT5O94916 1531 aa10.59□□□□□ -0.71
PCNX4-210ENST00000555740 ABCC6O95255 1503 aa10.59□□□□□ -0.71
PCNX4-210ENST00000555740 SBNO1A3KN83 1393 aa10.59□□□□□ -0.71
PCNX4-210ENST00000555740 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
PCNX4-210ENST00000555740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
PCNX4-210ENST00000555740 AKT1S1Q96B36 256 aa10.58□□□□□ -0.72
PCNX4-210ENST00000555740 RBM33Q96EV2 1170 aaKnown RBP10.58□□□□□ -0.72
PCNX4-210ENST00000555740 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
PCNX4-210ENST00000555740 AATKQ6ZMQ8 1374 aa10.58□□□□□ -0.72
PCNX4-210ENST00000555740 PPP1R37O75864 691 aa10.58□□□□□ -0.72
PCNX4-210ENST00000555740 INSRP06213 1382 aa10.58□□□□□ -0.72
PCNX4-210ENST00000555740 MAP2P11137 1827 aaKnown RBP10.57□□□□□ -0.72
PCNX4-210ENST00000555740 CDK12Q9NYV4 1490 aaPredicted RBP10.57□□□□□ -0.72
PCNX4-210ENST00000555740 SGIP1Q9BQI5 828 aa10.57□□□□□ -0.72
PCNX4-210ENST00000555740 PEAK1Q9H792 1746 aa10.57□□□□□ -0.72
PCNX4-210ENST00000555740 LTN1O94822 1766 aa10.57□□□□□ -0.72
PCNX4-210ENST00000555740 FYB1O15117 783 aa10.56□□□□□ -0.72
PCNX4-210ENST00000555740 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
PCNX4-210ENST00000555740 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
PCNX4-210ENST00000555740 COL16A1Q07092 1604 aaPredicted RBP10.56□□□□□ -0.72
PCNX4-210ENST00000555740 NLRP13Q86W25 1043 aa10.56□□□□□ -0.72
PCNX4-210ENST00000555740 NGDNQ8NEJ9 315 aaKnown RBP10.55□□□□□ -0.72
PCNX4-210ENST00000555740 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
PCNX4-210ENST00000555740 NPHP3Q7Z494 1330 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 CC2D1BQ5T0F9 858 aaKnown RBP10.54□□□□□ -0.72
PCNX4-210ENST00000555740 PHLPP1O60346 1717 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 USP19O94966 1318 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 BRINP3Q76B58 766 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 PMFBP1Q8TBY8 1022 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 ORAI2Q96SN7 254 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 CAMTA1Q9Y6Y1 1673 aa10.54□□□□□ -0.72
PCNX4-210ENST00000555740 KIF24Q5T7B8 1368 aa10.53□□□□□ -0.72
PCNX4-210ENST00000555740 NME9Q86XW9 330 aa10.53□□□□□ -0.72
PCNX4-210ENST00000555740 PNPLA6Q8IY17 1366 aa10.53□□□□□ -0.72
PCNX4-210ENST00000555740 SOS2Q07890 1332 aaPredicted RBP10.52□□□□□ -0.72
PCNX4-210ENST00000555740 MORC1Q86VD1 984 aa10.52□□□□□ -0.72
PCNX4-210ENST00000555740 SLAIN2Q9P270 581 aa10.52□□□□□ -0.72
PCNX4-210ENST00000555740 FAM208AQ9UK61 1670 aaKnown RBP10.52□□□□□ -0.73
PCNX4-210ENST00000555740 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
PCNX4-210ENST00000555740 BLMP54132 1417 aaPredicted RBP10.52□□□□□ -0.73
PCNX4-210ENST00000555740 RTL1A6NKG5 1358 aa10.52□□□□□ -0.73
PCNX4-210ENST00000555740 ARHGEF10O15013 1369 aa10.52□□□□□ -0.73
PCNX4-210ENST00000555740 COL18A1P39060 1754 aa10.52□□□□□ -0.73
PCNX4-210ENST00000555740 SEMA3EO15041 775 aa10.51□□□□□ -0.73
PCNX4-210ENST00000555740 GGNBP2Q9H3C7 697 aa10.51□□□□□ -0.73
PCNX4-210ENST00000555740 COG3Q96JB2 828 aa10.5□□□□□ -0.73
PCNX4-210ENST00000555740 PSME1Q06323 249 aa10.5□□□□□ -0.73
PCNX4-210ENST00000555740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.73
PCNX4-210ENST00000555740 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
PCNX4-210ENST00000555740 WDR70Q9NW82 654 aa10.49□□□□□ -0.73
PCNX4-210ENST00000555740 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
PCNX4-210ENST00000555740 KRT28Q7Z3Y7 464 aa10.49□□□□□ -0.73
PCNX4-210ENST00000555740 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
PCNX4-210ENST00000555740 MRS2Q9HD23 443 aa10.48□□□□□ -0.73
PCNX4-210ENST00000555740 FOXO3O43524 673 aa10.47□□□□□ -0.73
PCNX4-210ENST00000555740 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
PCNX4-210ENST00000555740 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
PCNX4-210ENST00000555740 PNISRQ8TF01 805 aaKnown RBP10.47□□□□□ -0.73
PCNX4-210ENST00000555740 CPDO75976 1380 aa10.46□□□□□ -0.73
PCNX4-210ENST00000555740 FLT4P35916 1363 aa10.46□□□□□ -0.73
PCNX4-210ENST00000555740 RYDENQ9NUL5 291 aaKnown RBP10.46□□□□□ -0.74
PCNX4-210ENST00000555740 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
PCNX4-210ENST00000555740 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
PCNX4-210ENST00000555740 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
PCNX4-210ENST00000555740 COL14A1Q05707 1796 aaKnown RBP10.45□□□□□ -0.74
PCNX4-210ENST00000555740 KCNH5Q8NCM2 988 aa10.45□□□□□ -0.74
PCNX4-210ENST00000555740 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
PCNX4-210ENST00000555740 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
PCNX4-210ENST00000555740 TOM1O60784 492 aa10.44□□□□□ -0.74
PCNX4-210ENST00000555740 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
PCNX4-210ENST00000555740 CFAP53Q96M91 514 aa10.44□□□□□ -0.74
PCNX4-210ENST00000555740 MTHFSP49914 203 aa10.44□□□□□ -0.74
PCNX4-210ENST00000555740 NLRP6P59044 892 aa10.44□□□□□ -0.74
PCNX4-210ENST00000555740 ZC3H15Q8WU90 426 aaKnown RBP10.44□□□□□ -0.74
PCNX4-210ENST00000555740 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
PCNX4-210ENST00000555740 PLCH1Q4KWH8 1693 aa10.43□□□□□ -0.74
PCNX4-210ENST00000555740 NRAPQ86VF7 1730 aa10.43□□□□□ -0.74
PCNX4-210ENST00000555740 NWD2Q9ULI1 1742 aa10.43□□□□□ -0.74
PCNX4-210ENST00000555740 MAP3K19Q56UN5 1328 aa10.43□□□□□ -0.74
PCNX4-210ENST00000555740 PSEN1P49768 467 aa10.43□□□□□ -0.74
PCNX4-210ENST00000555740 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
PCNX4-210ENST00000555740 WNK3Q9BYP7 1800 aa10.42□□□□□ -0.74
PCNX4-210ENST00000555740 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
PCNX4-210ENST00000555740 XPCQ01831 940 aaPredicted RBP10.42□□□□□ -0.74
PCNX4-210ENST00000555740 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms