RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-210ENST00000555718 CAPN5O15484 640 aaPredicted RBP11.86□□□□□ -0.51
PPP4R3A-210ENST00000555718 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
PPP4R3A-210ENST00000555718 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
PPP4R3A-210ENST00000555718 ITPKCQ96DU7 683 aa11.85□□□□□ -0.51
PPP4R3A-210ENST00000555718 TRIM46Q7Z4K8 759 aa11.84□□□□□ -0.51
PPP4R3A-210ENST00000555718 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
PPP4R3A-210ENST00000555718 ZIC2O95409 532 aaPredicted RBP11.83□□□□□ -0.52
PPP4R3A-210ENST00000555718 IRF5Q13568 498 aa11.82□□□□□ -0.52
PPP4R3A-210ENST00000555718 INTS6LQ5JSJ4 861 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-210ENST00000555718 GDPD2Q9HCC8 539 aa11.82□□□□□ -0.52
PPP4R3A-210ENST00000555718 NR1H3Q13133 447 aa11.8□□□□□ -0.52
PPP4R3A-210ENST00000555718 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
PPP4R3A-210ENST00000555718 CCDC116Q8IYX3 515 aa11.8□□□□□ -0.52
PPP4R3A-210ENST00000555718 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
PPP4R3A-210ENST00000555718 RAB15P59190 212 aa11.79□□□□□ -0.52
PPP4R3A-210ENST00000555718 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
PPP4R3A-210ENST00000555718 APBB1O00213 710 aa11.78□□□□□ -0.52
PPP4R3A-210ENST00000555718 SNRPBP14678 240 aaKnown RBP11.78□□□□□ -0.52
PPP4R3A-210ENST00000555718 POM121Q96HA1 1249 aa11.77□□□□□ -0.53
PPP4R3A-210ENST00000555718 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
PPP4R3A-210ENST00000555718 ESPNB1AK53 854 aa11.76□□□□□ -0.53
PPP4R3A-210ENST00000555718 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
PPP4R3A-210ENST00000555718 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
PPP4R3A-210ENST00000555718 ABL2P42684 1182 aa11.75□□□□□ -0.53
PPP4R3A-210ENST00000555718 CBLBQ13191 982 aa11.75□□□□□ -0.53
PPP4R3A-210ENST00000555718 NBPF20Q3BBV1 942 aa11.75□□□□□ -0.53
PPP4R3A-210ENST00000555718 TMPRSS4Q9NRS4 437 aa11.75□□□□□ -0.53
PPP4R3A-210ENST00000555718 FLIIQ13045 1269 aa11.74□□□□□ -0.53
PPP4R3A-210ENST00000555718 MRPL14Q6P1L8 145 aaKnown RBP11.74□□□□□ -0.53
PPP4R3A-210ENST00000555718 TRIM47Q96LD4 638 aa11.74□□□□□ -0.53
PPP4R3A-210ENST00000555718 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
PPP4R3A-210ENST00000555718 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
PPP4R3A-210ENST00000555718 ERVH48-1M5A8F1 160 aa11.73□□□□□ -0.53
PPP4R3A-210ENST00000555718 MEIOBQ8N635 442 aa11.73□□□□□ -0.53
PPP4R3A-210ENST00000555718 ZFP42Q96MM3 310 aa11.73□□□□□ -0.53
PPP4R3A-210ENST00000555718 PURBQ96QR8 312 aaKnown RBP11.73□□□□□ -0.53
PPP4R3A-210ENST00000555718 VAC14Q08AM6 782 aa11.71□□□□□ -0.53
PPP4R3A-210ENST00000555718 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
PPP4R3A-210ENST00000555718 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
PPP4R3A-210ENST00000555718 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
PPP4R3A-210ENST00000555718 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
PPP4R3A-210ENST00000555718 LILRA1O75019 489 aa11.68□□□□□ -0.54
PPP4R3A-210ENST00000555718 DHX9Q08211 1270 aaKnown RBP11.68□□□□□ -0.54
PPP4R3A-210ENST00000555718 LINC00528Q8N1L1 170 aa11.68□□□□□ -0.54
PPP4R3A-210ENST00000555718 ZNF775Q96BV0 537 aaPredicted RBP11.68□□□□□ -0.54
PPP4R3A-210ENST00000555718 SENP2Q9HC62 589 aa11.68□□□□□ -0.54
PPP4R3A-210ENST00000555718 PRM3Q9NNZ6 103 aa11.68□□□□□ -0.54
PPP4R3A-210ENST00000555718 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
PPP4R3A-210ENST00000555718 Q6ZVU0 165 aa11.67□□□□□ -0.54
PPP4R3A-210ENST00000555718 AGBL1Q96MI9 1066 aa11.67□□□□□ -0.54
PPP4R3A-210ENST00000555718 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
PPP4R3A-210ENST00000555718 CYLDQ9NQC7 956 aa11.66□□□□□ -0.54
PPP4R3A-210ENST00000555718 SEPT12Q8IYM1 358 aa11.65□□□□□ -0.54
PPP4R3A-210ENST00000555718 BMP2P12643 396 aa11.64□□□□□ -0.55
PPP4R3A-210ENST00000555718 SCARF1Q14162 830 aa11.64□□□□□ -0.55
PPP4R3A-210ENST00000555718 KIFC2Q96AC6 838 aa11.64□□□□□ -0.55
PPP4R3A-210ENST00000555718 CEP126Q9P2H0 1117 aa11.64□□□□□ -0.55
PPP4R3A-210ENST00000555718 KDF1Q8NAX2 398 aaPredicted RBP11.63□□□□□ -0.55
PPP4R3A-210ENST00000555718 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
PPP4R3A-210ENST00000555718 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
PPP4R3A-210ENST00000555718 SCTRP47872 440 aa11.62□□□□□ -0.55
PPP4R3A-210ENST00000555718 TSGA10IPQ3SY00 556 aa11.62□□□□□ -0.55
PPP4R3A-210ENST00000555718 RELBQ01201 579 aa11.61□□□□□ -0.55
PPP4R3A-210ENST00000555718 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
PPP4R3A-210ENST00000555718 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
PPP4R3A-210ENST00000555718 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
PPP4R3A-210ENST00000555718 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
PPP4R3A-210ENST00000555718 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
PPP4R3A-210ENST00000555718 TIMELESSQ9UNS1 1208 aa11.6□□□□□ -0.55
PPP4R3A-210ENST00000555718 PCDHB11Q9Y5F2 797 aa11.6□□□□□ -0.55
PPP4R3A-210ENST00000555718 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
PPP4R3A-210ENST00000555718 ZNF395Q9H8N7 513 aaPredicted RBP11.59□□□□□ -0.55
PPP4R3A-210ENST00000555718 POM121CA8CG34 1229 aa11.58□□□□□ -0.56
PPP4R3A-210ENST00000555718 UPP2O95045 317 aa11.58□□□□□ -0.56
PPP4R3A-210ENST00000555718 ADH1AP07327 375 aa11.58□□□□□ -0.56
PPP4R3A-210ENST00000555718 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
PPP4R3A-210ENST00000555718 PHTF2Q8N3S3 785 aa11.58□□□□□ -0.56
PPP4R3A-210ENST00000555718 SOS2Q07890 1332 aaPredicted RBP11.58□□□□□ -0.56
PPP4R3A-210ENST00000555718 SPINT1O43278 529 aa11.57□□□□□ -0.56
PPP4R3A-210ENST00000555718 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
PPP4R3A-210ENST00000555718 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
PPP4R3A-210ENST00000555718 DNMT3LQ9UJW3 386 aa11.57□□□□□ -0.56
PPP4R3A-210ENST00000555718 CTSOP43234 321 aaPredicted RBP11.56□□□□□ -0.56
PPP4R3A-210ENST00000555718 INSM2Q96T92 566 aaPredicted RBP11.56□□□□□ -0.56
PPP4R3A-210ENST00000555718 RAD21O60216 631 aa11.55□□□□□ -0.56
PPP4R3A-210ENST00000555718 LCE2CQ5TA81 110 aa11.55□□□□□ -0.56
PPP4R3A-210ENST00000555718 ZNF592Q92610 1267 aa11.55□□□□□ -0.56
PPP4R3A-210ENST00000555718 PIK3CDO00329 1044 aa11.54□□□□□ -0.56
PPP4R3A-210ENST00000555718 ADAMTS19Q8TE59 1207 aa11.54□□□□□ -0.56
PPP4R3A-210ENST00000555718 MAN1A2O60476 641 aa11.53□□□□□ -0.56
PPP4R3A-210ENST00000555718 PTGIRP43119 386 aa11.53□□□□□ -0.56
PPP4R3A-210ENST00000555718 CC2D2BQ6DHV5 1058 aa11.53□□□□□ -0.56
PPP4R3A-210ENST00000555718 OSBPL3Q9H4L5 887 aa11.53□□□□□ -0.56
PPP4R3A-210ENST00000555718 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.57
PPP4R3A-210ENST00000555718 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
PPP4R3A-210ENST00000555718 VEGFBP49765 207 aa11.52□□□□□ -0.57
PPP4R3A-210ENST00000555718 LCE2AQ5TA79 106 aaPredicted RBP11.52□□□□□ -0.57
PPP4R3A-210ENST00000555718 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
PPP4R3A-210ENST00000555718 ALG2Q9H553 416 aa11.52□□□□□ -0.57
PPP4R3A-210ENST00000555718 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms